BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0564400 Os05g0564400|AK073075
(217 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0564400 Similar to GTP-binding protein 422 e-118
Os09g0327100 Similar to GTP-binding protein 400 e-112
Os01g0667600 Similar to GTP-binding protein 349 1e-96
Os06g0551400 Ras-related protein RIC2 338 2e-93
AF327517 338 2e-93
Os01g0750000 Similar to Ras-related protein RIC2 322 1e-88
Os05g0516800 Similar to Ras-related protein RIC2 321 3e-88
AK060246 318 2e-87
Os03g0823700 Similar to Ras-related protein Rab11C 298 2e-81
Os01g0848700 Similar to Ras-related protein Rab11C 293 7e-80
Os03g0843100 Ras GTPase family protein 284 3e-77
Os05g0105100 Similar to Small GTPase rab11-related 282 2e-76
Os05g0280200 Similar to Ras-related protein Rab11A 276 1e-74
Os10g0377400 Similar to Ras-related protein Rab11D 260 5e-70
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 240 6e-64
Os08g0525000 Ras GTPase family protein 233 5e-62
Os09g0527600 Similar to GTP-binding protein (Fragment) 223 1e-58
Os06g0714600 Ras GTPase family protein 205 2e-53
Os04g0470100 Similar to Small GTP binding protein Rab2 191 5e-49
Os01g0179700 Similar to GTP-binding protein YPTM2 184 5e-47
Os02g0653800 Similar to GTP-binding protein 183 9e-47
AK062838 182 1e-46
Os01g0558600 Ras-related protein RIC1 177 7e-45
Os05g0461300 Similar to RAB8C 175 2e-44
Os03g0819900 Similar to RAB8C 173 7e-44
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 173 1e-43
AK060839 172 2e-43
Os03g0151900 Similar to Small GTP-binding protein 164 7e-41
Os12g0631100 Ras small GTPase, Ras type family protein 159 2e-39
Os10g0441800 Similar to RAB5B 158 3e-39
Os03g0666500 Similar to Ras-related protein RHA1 157 8e-39
Os03g0146000 Similar to RAB1X 150 1e-36
Os10g0456600 Ras GTPase family protein 143 8e-35
Os10g0208000 143 9e-35
Os07g0195100 Similar to Ras-related protein ARA-3 136 9e-33
Os07g0496000 Similar to Nt-rab6 protein 131 3e-31
Os01g0227300 Similar to RAB7D 130 8e-31
Os05g0516600 Small GTP binding protein 130 9e-31
Os01g0714900 Similar to RAB7A 124 7e-29
Os05g0536900 Similar to RAB7A 122 2e-28
Os05g0341600 Similar to Ras-related protein Rab-21 116 1e-26
Os09g0281700 Similar to Ras-related protein RGP1 (GTP-bindi... 110 6e-25
AK104720 107 1e-23
Os01g0611100 Similar to GTP-binding nuclear protein Ran-2 102 1e-22
Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (... 102 1e-22
Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (... 101 5e-22
AK111978 89 3e-18
Os02g0120800 Similar to Small GTP-binding protein (Fragment) 85 4e-17
AK100585 83 1e-16
Os06g0687100 Ras GTPase family protein 83 2e-16
Os02g0312600 Similar to Small GTP-binding protein (Fragment) 81 6e-16
Os05g0513800 Small GTP-binding protein OsRac2 81 6e-16
Os01g0229400 Small GTP-binding protein OsRac1 80 1e-15
Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 ... 80 1e-15
Os02g0742200 Small GTP-binding protein OsRac3 79 3e-15
D17779 70 1e-12
Os02g0834000 Similar to Rop4 small GTP binding protein 69 2e-12
Os05g0105200 Similar to Ras-related protein Rab-1B 68 5e-12
AK110439 65 4e-11
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
Query: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK
Sbjct: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
Query: 181 ALDIGDDPAAPPKGQTINVGGKDD 204
ALDIGDDPAAPPKGQTINVGGKDD
Sbjct: 181 ALDIGDDPAAPPKGQTINVGGKDD 204
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/204 (94%), Positives = 200/204 (98%)
Query: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
MAYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDKV
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERW++EL+DHTDANIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
MLVGNKADLRHLRAVS EDAK FAE+E+TFFMETSALESMNVE+AFTEVLTQIY VVSKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 181 ALDIGDDPAAPPKGQTINVGGKDD 204
ALDIGDDPAAPP+GQTINVGGKDD
Sbjct: 181 ALDIGDDPAAPPRGQTINVGGKDD 204
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 349 bits (895), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 163/202 (80%), Positives = 185/202 (91%)
Query: 3 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVK 62
YRA+++YDYLFKVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT+++ VDD++VK
Sbjct: 10 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVK 69
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIML 122
AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR +TFEN ERW++EL+DHTDANIV+ML
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVML 129
Query: 123 VGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKAL 182
VGNKADLRHLRAV EDA+AFAE TF METSALE+ NVE AFTEVL QIY VVS+ AL
Sbjct: 130 VGNKADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNAL 189
Query: 183 DIGDDPAAPPKGQTINVGGKDD 204
DIGDDPAAPP+G+TI+V KDD
Sbjct: 190 DIGDDPAAPPRGRTIDVSAKDD 211
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 338 bits (867), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/204 (79%), Positives = 184/204 (90%), Gaps = 3/204 (1%)
Query: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ VD KVV
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TFENVERW++EL+DHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
LVGNK+DLRHL AV T++ KAFAE+E+ +FMETSALES NVENAF EVLTQIY +VSK++
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRS 183
Query: 182 LDIGDDP-AAPPKGQTINVGGKDD 204
++ GDD + P KG+ IN+ KDD
Sbjct: 184 VEAGDDAGSGPGKGEKINI--KDD 205
>AF327517
Length = 217
Score = 338 bits (867), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/204 (79%), Positives = 184/204 (90%), Gaps = 3/204 (1%)
Query: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ VD KVV
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TFENVERW++EL+DHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
LVGNK+DLRHL AV T++ KAFAE+E+ +FMETSALES NVENAF EVLTQIY +VSK++
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRS 183
Query: 182 LDIGDDP-AAPPKGQTINVGGKDD 204
++ GDD + P KG+ IN+ KDD
Sbjct: 184 VEAGDDAGSGPGKGEKINI--KDD 205
>Os01g0750000 Similar to Ras-related protein RIC2
Length = 221
Score = 322 bits (825), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/203 (77%), Positives = 177/203 (87%), Gaps = 3/203 (1%)
Query: 3 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVK 62
YRA+DDYDYLFK VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRSI VD KVVK
Sbjct: 9 YRAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVK 68
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIML 122
AQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR TF+NV RW++EL+DHTD +IV+ML
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVML 128
Query: 123 VGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKAL 182
VGNK+DLRHL AVSTED K +AE E+ +FMETSAL++ NVENAF EVLTQIY VSKK +
Sbjct: 129 VGNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV 188
Query: 183 DIGDDPA-APPKGQTINVGGKDD 204
+ DD + AP KG+ INV KDD
Sbjct: 189 EASDDGSNAPIKGEKINV--KDD 209
>Os05g0516800 Similar to Ras-related protein RIC2
Length = 220
Score = 321 bits (822), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/204 (76%), Positives = 178/204 (87%), Gaps = 3/204 (1%)
Query: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ VD KV+
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR TF+NV RW+REL+DHTD +IV M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCM 126
Query: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
L+GNK+DLRHL AVSTED K FAE E+ +FMETSAL++ NV+NAF EVLTQIY +V+KK
Sbjct: 127 LIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKP 186
Query: 182 LDIGDD-PAAPPKGQTINVGGKDD 204
++ +D A P KG+ INV KDD
Sbjct: 187 VEAPEDGSAGPGKGEKINV--KDD 208
>AK060246
Length = 220
Score = 318 bits (815), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/204 (75%), Positives = 177/204 (86%), Gaps = 3/204 (1%)
Query: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ VD KV+
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR F+NV RW+REL+DHTD +IV M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRAAFDNVGRWLRELRDHTDPSIVCM 126
Query: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
L+GNK+DLRHL AVSTED K FAE E+ +FMETSAL++ NV+NAF EVLTQ+Y +V+KK
Sbjct: 127 LIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQMYQIVNKKP 186
Query: 182 LDIGDD-PAAPPKGQTINVGGKDD 204
++ +D A P KG+ INV KDD
Sbjct: 187 VEAPEDGSAGPGKGEKINV--KDD 208
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 298 bits (763), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 169/203 (83%), Gaps = 6/203 (2%)
Query: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
MA+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ ++ +
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TFEN++RW+REL+DH D+NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
M+VGNK+DL HLR+V ED +A AEKE F+ETSALE++NVE AF +L I+ ++SKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKK 180
Query: 181 AL----DIGDDPAAPPKGQTINV 199
AL G P P +G TINV
Sbjct: 181 ALAAQEAAGSGP--PTQGTTINV 201
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 293 bits (750), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 170/202 (84%), Gaps = 3/202 (1%)
Query: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
MA+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ ++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGAL+V+D+T+ TF+NV+RW+REL+DH DANIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
M+VGNK+DL HLR+V ED AF+EKE F+ETSALE++NVE AF VL++I+ +VSKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
Query: 181 ALDIGDDPAA---PPKGQTINV 199
AL + + +G TINV
Sbjct: 181 ALAAQESASTNGRSMQGTTINV 202
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 284 bits (726), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 168/200 (84%), Gaps = 3/200 (1%)
Query: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
D+YDYLFK+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I V+ K+VKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDVT+ TFENV+RW++EL+DH D+NIV+ML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 127 ADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD 186
DL+HLR+VS EDA +FAE+E F+ETSAL++ NV+ AF VLT+IY ++SKKAL +
Sbjct: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADE 192
Query: 187 DPAAPP---KGQTINVGGKD 203
A +GQ+I V D
Sbjct: 193 AGAGAGAVREGQSIQVSATD 212
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 166/204 (81%), Gaps = 4/204 (1%)
Query: 4 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKA 63
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++HV+ K++KA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 65
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLV 123
QIWDTAGQERYRAITSAYYRGA+GA++VYDV++ TF+N+ RW++EL+DH DANI IMLV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLV 125
Query: 124 GNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALD 183
GNK DL+HLRAV+T+DA FAE E ++ETSALE+ NVE AF +L IY +SKK +
Sbjct: 126 GNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVA 185
Query: 184 IGDDPAAP----PKGQTINVGGKD 203
+ A +G+TINV D
Sbjct: 186 SDEGGAGAAGGVKEGKTINVAAGD 209
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 170/203 (83%), Gaps = 4/203 (1%)
Query: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
M R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S+ ++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RW+REL+DH D++IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
M+VGNK+DL HLRAVS ++ KA AEKE FF+ETSA+E++NVE AF ++T++Y +V++K
Sbjct: 121 MMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
Query: 181 ALDIGDDPAA----PPKGQTINV 199
AL + AA P +G+TI++
Sbjct: 181 ALAAKEAAAASAPLPSQGKTISI 203
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 260 bits (665), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 157/193 (81%), Gaps = 4/193 (2%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
DY+FKVVLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ +D K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADL 129
GQERYRA+TSAYYRGA+GAL+VYD+T+ +F+++ RW+ EL+ H D NIVIMLVGNK+DL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 130 RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDPA 189
RAVSTEDAK FAEKEN FF+ETSAL++ NVENAF VL++I+ + SKK ++ DP
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKK--NMAADPK 185
Query: 190 APPKGQTINVGGK 202
A G ++ GK
Sbjct: 186 A--NGAAPSLAGK 196
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 240 bits (612), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 143/184 (77%), Gaps = 2/184 (1%)
Query: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
MAY D++ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF++V RW+ EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 119 VIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVS 178
V +LVGNK DL+H R VST + KA AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILS 180
Query: 179 KKAL 182
+K
Sbjct: 181 RKVF 184
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 233 bits (595), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 138/174 (79%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 69
+YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ ++ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADL 129
GQER+RA+TSAYYRGA GAL+VYD++R TF+NV RW++EL H+D + MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALD 183
++R V E+ KA AE E FFMETSAL+S NV AF V+ +IY VS+K L+
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILN 184
>Os09g0527600 Similar to GTP-binding protein (Fragment)
Length = 239
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 147/205 (71%), Gaps = 12/205 (5%)
Query: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWD 67
+ DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 68 TAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKA 127
TAGQERYRA+TSAYYRGA+GA+VVYD+TR TFENV RW+ EL+ H D + V+ L+GNKA
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 128 DL-RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDI-- 184
D+ R V+ ++A FAE++ FF E SAL NV+ AF +L +I+ VVS++AL++
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 185 ---------GDDPAAPPKGQTINVG 200
G KG T++VG
Sbjct: 198 ARRMRDGGAGGGEVLSLKGTTLDVG 222
>Os06g0714600 Ras GTPase family protein
Length = 225
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 139/176 (78%)
Query: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
++ DY+FKVV+IGDS VGK+ LL RFT++EF ++SKSTIG+EF TR++ + K VKAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNK 126
DTAGQERYRA+TSAYYRGA+GA++VYDVT +F + RW+ +L+ H D +IV+ML+GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNK 121
Query: 127 ADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKAL 182
ADL H RAV+ ++A AFAE + FF E SAL NVE AF +L +I+ +VS+++L
Sbjct: 122 ADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSL 177
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 191 bits (484), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 122/189 (64%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 68
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I VD + VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKAD 128
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ W+ + + H +AN+ IMLVGNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKSD 122
Query: 129 LRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDP 188
L H RAVS E+ + FA++ FME SA + NVE AF + IY + D+ ++
Sbjct: 123 LSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDLSNEA 182
Query: 189 AAPPKGQTI 197
G T+
Sbjct: 183 NGIKLGYTV 191
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
+ +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
WDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++W+ E+ + N+ +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGN 121
Query: 126 KADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIY-HVVSKKALDI 184
K+DL + VS+E AKAFA++ FMETSA + NVE AF + I + S+ A
Sbjct: 122 KSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAASN 181
Query: 185 GDDPAAPPKGQTIN 198
P +GQ +N
Sbjct: 182 ARPPTVQIRGQPVN 195
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 183 bits (464), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
+ +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
WDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++W+ E+ + N+ +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGN 121
Query: 126 KADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIY-HVVSKKALDI 184
K+DL + VS+E AKAFA++ FMETSA + NVE AF + I + S+ A
Sbjct: 122 KSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAAN 181
Query: 185 GDDPAAPPKGQTIN 198
P +GQ +N
Sbjct: 182 ARPPTVQIRGQPVN 195
>AK062838
Length = 201
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 124/189 (65%), Gaps = 5/189 (2%)
Query: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
+ +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+I +D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
WDTAGQER+R ITS+YYRGA G +VVYDVT +F NV++W+ E+ + N+ +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGN 121
Query: 126 KADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIG 185
K+DL R VST+ AK FAE F+ETSA + NVE AF + QI KK +
Sbjct: 122 KSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVETAFMMMAAQI-----KKRMANA 176
Query: 186 DDPAAPPKG 194
A P G
Sbjct: 177 PTAAKPNAG 185
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
+ +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
WDTAGQER+R ITS+YYRGA G +VVYDVT +F NV++W+ E+ + N+ +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGN 121
Query: 126 KADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIG 185
K DL R VS E KA A++ F+ETSA ++ NVE AF + +I + ++ +
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNA 181
Query: 186 DDPAA-PPKGQTI 197
PA +GQ +
Sbjct: 182 SKPATVQMRGQPV 194
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 125/198 (63%), Gaps = 9/198 (4%)
Query: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWD 67
DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKA 127
TAGQER+R IT+AYYRGA+G L+VYDVT +F N+ W+R ++ H N+ +LVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 128 DL-RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD 186
D+ RAV T +A A++ F ETSA ++NVE F + I ++
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLA-------- 182
Query: 187 DPAAPPKGQTINVGGKDD 204
+ + P+ +TI + K D
Sbjct: 183 ETDSKPEDKTIKINNKTD 200
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 173 bits (439), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 123/193 (63%), Gaps = 9/193 (4%)
Query: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWD 67
DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R++ +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 68 TAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKA 127
TAGQER+R IT+AYYRGA+G L+VYDVT +F N+ W+R ++ H N+ +LVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 128 DL-RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD 186
D+ RAV T +A A++ F ETSA ++NVE F + I +S
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLS-------- 182
Query: 187 DPAAPPKGQTINV 199
+ + P+ +TI +
Sbjct: 183 ETDSKPEDRTIKI 195
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWD 67
DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKA 127
TAGQER+R IT+AYYRGA+G L+VYDVT +F N+ W+R ++ H N+ +LVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 128 DL-RHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEV 169
D+ RAV T +A A++ F ETSA ++NVE F +
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSI 173
>AK060839
Length = 209
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 116/168 (69%)
Query: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
++++DYLFK++LIGDS VGKS L RF + + STIGV+F R+I +D K +K QI
Sbjct: 2 NNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQI 61
Query: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
WDTAGQER+R ITS+YYRGA G ++VYD+T +F NV+ WM E+ + + ++ +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKEWMSEIDKYANDSVCKLLVGN 121
Query: 126 KADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQI 173
K DL R V T A+A+A++ F+ETSA +S+NVE AF + I
Sbjct: 122 KCDLAESRVVETAVAQAYADEIGIPFLETSAKDSINVEEAFLAMCAAI 169
>Os03g0151900 Similar to Small GTP-binding protein
Length = 199
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Query: 5 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK-VVKA 63
A D D K+VL+GDSGVGKS ++ RF R +F SK T+G F ++++ ++D +VK
Sbjct: 24 ATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKF 83
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLV 123
+IWDTAGQERY A+ YYRGA A+VVYD+T +F + W++EL+ H +I+++LV
Sbjct: 84 EIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLV 143
Query: 124 GNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQI 173
GNKADL R VS+++A+ +AEK N F+ETSA + N+ F E+ ++
Sbjct: 144 GNKADLHENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRL 193
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 9/185 (4%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D+ VK +IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLR 133
Y ++ YYRGA A+VVYD+T +F ++W++EL+ + N ++ L GNKAD+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 134 AVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDPAAPPK 193
V E+AK +A++ FFMETSA ++NV + ++H ++K+ L G P
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVND--------VFHEIAKRLLQ-GQQAQDTPA 183
Query: 194 GQTIN 198
G +N
Sbjct: 184 GMVLN 188
>Os10g0441800 Similar to RAB5B
Length = 250
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV-VKAQIWDTAGQE 72
K+VL+GDSGVGKS ++ RF R +F SK T+G F ++++ ++D VK +IWDTAGQE
Sbjct: 84 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQE 143
Query: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHL 132
RY A+ YYRGA A+VVYD+T +F + W++EL+ H ++++ LVGNKADL
Sbjct: 144 RYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPDMIMALVGNKADLHDN 203
Query: 133 RAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQI 173
R+VS++DA+ +AE+ FF+ETSA + N+ F E+ ++
Sbjct: 204 RSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRL 244
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 109/162 (67%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D+ VK +IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLR 133
Y ++ YYRGA A+VVYD+T +F ++W++EL+ +++ V+ L GNKADL R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETR 132
Query: 134 AVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYH 175
V E+AK +A++ FFMETSA + NV + F E+ ++
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQ 174
>Os03g0146000 Similar to RAB1X
Length = 210
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 113/181 (62%), Gaps = 3/181 (1%)
Query: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRF-TRNEFSLESKSTIGVEFATRSIHVDDK 59
MA YD FK++LIGDS VGKS+LL F + + E TIGV+F + + V+ K
Sbjct: 1 MASSPASSYDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGK 60
Query: 60 VVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDH-TDAN 117
+K IWDTAGQER+R ITS+YYRGA G ++VYDVT+ +F N+ + W +E++ H T+
Sbjct: 61 KLKLTIWDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKE 120
Query: 118 IVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVV 177
+ MLVGNK D R V+ E+ AFA++ F+E+SA NVE F E+ +I V
Sbjct: 121 CIKMLVGNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEKCFEELALKILEVP 180
Query: 178 S 178
S
Sbjct: 181 S 181
>Os10g0456600 Ras GTPase family protein
Length = 222
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL----ESKSTIGVEFATRSIHVDDKVVKAQ 64
++ FK++LIGDSGVGKS+LL F + + TIGV+F + + + K +K
Sbjct: 16 HECSFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLT 75
Query: 65 IWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDH-TDANIVIML 122
IWDTAGQER+R ITS+YYRGA G ++VYDVT+ +F N+ E W +E++ H ++ + + ML
Sbjct: 76 IWDTAGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKML 135
Query: 123 VGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVS 178
VGNK D R V+ E+ AFAE+ F+E+SA NVE F E+ +I V S
Sbjct: 136 VGNKIDKEDERTVTREEGLAFAEESGCLFLESSAKTRDNVEKCFEELALKIMDVPS 191
>Os10g0208000
Length = 355
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 68
Y Y FK V IGD+GVGKS LL +FT F T GVE+ + VD K K QIWDT
Sbjct: 5 YAYRFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDT 64
Query: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKAD 128
AGQE +R IT +YYRG L+VYD+T W+ + H A + I+L+GNK D
Sbjct: 65 AGQEAFRCITRSYYRGNAACLLVYDIT---------SWLEDATQHASARMTIILIGNKCD 115
Query: 129 LRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDP 188
L H R VS ++ + FA++ FME SA + NVE AF ++ + +++ D+
Sbjct: 116 LSHRRVVSYQEGEQFAKEHGLLFMEASAKTAHNVEKAFILAARTVHKKIEDGVINLLDEN 175
Query: 189 AAPPKG 194
G
Sbjct: 176 CGVKSG 181
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 102/166 (61%)
Query: 23 VGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYY 82
+GKS LL RF+ + F+ +TIG++F R++ +D K VK QIWDTAGQER+R IT+AYY
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 83 RGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKA 142
RGA+G L+VYDVT +F N+ W+R ++ H N+ +LVGNK D+ R VST +
Sbjct: 144 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVDMDTKRVVSTAQGQK 203
Query: 143 FAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDP 188
A++ F ETSA + NVE F + I +++ + P
Sbjct: 204 LADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRLTETVAAAAEPP 249
>Os07g0496000 Similar to Nt-rab6 protein
Length = 208
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 106/157 (67%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 72
+K+V +GD VGK+++++RF ++F ++TIG++F +++++++D+ V+ Q+WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHL 132
R+R++ +Y R + A++V+DV +F N +W+ E++ ++++I+LVGNK DL
Sbjct: 70 RFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDK 129
Query: 133 RAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEV 169
R VS E+ + A+ F+ETSA N++ F ++
Sbjct: 130 RQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKI 166
>Os01g0227300 Similar to RAB7D
Length = 207
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + +DD++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMREL----KDHTDANIVIMLVGNKA 127
ER++++ A+YRGA ++VYDV +FE + W E N +++GNK
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
Query: 128 DL--RHLRAVSTEDAKAF-AEKENTFFMETSALESMNVENAF 166
D+ + R VS + AKA+ A K N + ETSA E NVE AF
Sbjct: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
>Os05g0516600 Small GTP binding protein
Length = 206
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + +D++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDA----NIVIMLVGNKA 127
ER++++ A+YRGA ++VYDV +F+N+ W E N +L+GNK
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLLGNKV 127
Query: 128 DL--RHLRAVSTEDAKAF-AEKENTFFMETSALESMNVENAFTEVL 170
D+ + R VS + AKA+ A K N + ETSA + NVE AF ++
Sbjct: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIV 173
>Os01g0714900 Similar to RAB7A
Length = 207
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++D++V QIWDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDAN----IVIMLVGNKA 127
ER++++ A+YRGA ++VYDV + +F+ + W E + + +L+GNK
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILLGNKI 128
Query: 128 DLRHLRAVSTEDAKAF---AEKENTFFMETSALESMNVENAFTEV 169
D+ ++ + KA + K N + ETSA E NV++AF V
Sbjct: 129 DVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSV 173
>Os05g0536900 Similar to RAB7A
Length = 206
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++D++V QIWDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDA----NIVIMLVGNKA 127
ER++++ A+YRGA ++VYDV +F + W E + +L+GNK
Sbjct: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
Query: 128 DLR--HLRAVSTEDAKAFA-EKENTFFMETSALESMNVENAF 166
D+ + RA+ + AK + K N + ETSA + NV++AF
Sbjct: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 72
FK+VL+GD VGK++L+ R+ + FS + ++T+ + T+ + V+ + IWDTAGQE
Sbjct: 15 FKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQE 74
Query: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHL 132
++ A+ YYR A AL+VYD+T + TF V +W++ELK + +IV+ + NK+DL
Sbjct: 75 KFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLVRS 134
Query: 133 RAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDPAAPP 192
+ + T +A ++AE TSA +++ F+++ ++ +K G A P
Sbjct: 135 KHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLE--RRKNSSDGLSLAHPK 192
Query: 193 KGQTI 197
KG I
Sbjct: 193 KGILI 197
>Os09g0281700 Similar to Ras-related protein RGP1 (GTP-binding regulatory protein
RGP1)
Length = 162
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 59/73 (80%)
Query: 110 LKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEV 169
L+ H D NIVIML+GNK+DL LR V TEDAK FAE+EN FFMETSALES NVENAF V
Sbjct: 52 LRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTV 111
Query: 170 LTQIYHVVSKKAL 182
LT+IY +VSKK L
Sbjct: 112 LTEIYRIVSKKNL 124
>AK104720
Length = 164
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Query: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDH-TDA 116
K +K IWDTAGQER+R +TS+YYRGA G ++VYDVTR TF N+ + W +E+ + T+
Sbjct: 14 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 73
Query: 117 NIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHV 176
+ + MLVGNK D RAV+ ++ FA + F+E SA +NVE F E++ +I
Sbjct: 74 DCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDT 133
Query: 177 VS 178
S
Sbjct: 134 PS 135
>Os01g0611100 Similar to GTP-binding nuclear protein Ran-2
Length = 221
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 1 MAYRADDDYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 59
MA DY FK+V++GD G GK+ + R EF + + TIGVE +
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
Query: 60 VVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIV 119
++ WDTAGQE++ + YY A++++DVT +T++NV W R+L + NI
Sbjct: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIP 119
Query: 120 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSK 179
I+L GNK D+++ R V + F K+N + E SA + N E F + ++
Sbjct: 120 IVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEVSAKSNYNFEKPFLYLARKL---AGD 174
Query: 180 KALDIGDDPAAPPKGQTINVGGK 202
L + PA P TI++ +
Sbjct: 175 GNLHFVETPALAPPDVTIDLAAQ 197
>Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 226
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 72
FK++L+GD G GK+ + R EF + TIGVE H V+ WDTAGQE
Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQE 77
Query: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHL 132
++ + YY A++++DVT +T++NV W +++ D NI I+L GNK D+++
Sbjct: 78 KFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVCD-NIPIVLCGNKVDMKN- 135
Query: 133 RAVSTEDAKAFAEKENTFFMETSALESMNVENAF 166
R V + F K+N + E SA + N E F
Sbjct: 136 RQVKAKMV-TFHRKKNLQYYEISAKSNYNFEKPF 168
>Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 221
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 1 MAYRADDDYDYL-FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 59
MA DY FK+V++GD G GK+ + R EF + + TIGVE +
Sbjct: 1 MALPNQGTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCG 60
Query: 60 VVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIV 119
++ WDTAGQE++ + YY A++++DVT +T++NV W R+L + NI
Sbjct: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIP 119
Query: 120 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAF 166
I+L GNK D+++ R V + F K+N + E SA + N E F
Sbjct: 120 IVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 164
>AK111978
Length = 225
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 72
FK++L+GD G GK+ + R EF +T+GV+ H + ++ WDTAGQE
Sbjct: 23 FKLILVGDGGTGKTTFVKRHLTGEFEKRYIATVGVDVHPLHFHTNCGMICFNCWDTAGQE 82
Query: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHL 132
++ + YY A++++DVT T+ +V W R++ D I ++LVGNK D
Sbjct: 83 KFGGLRDGYYIQGQCAIIMFDVTSRNTYRSVPNWYRDIVRVCDV-IPMVLVGNKVDAPD- 140
Query: 133 RAVSTEDAKAFAEKENTFFMETSALESMNVENAF 166
RAV + F K+ + + SA + N E F
Sbjct: 141 RAVKAK-MITFHRKKTLQYYDISAKTNYNFEKPF 173
>Os02g0120800 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA L+ + + ++ENV ++W+ ELK H + I+LVG K DLR
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
Query: 131 --------HLRAVSTEDAKAFAEKEN---TFFMETSALESMNVENAF 166
H AV A+ ++ +++E S+ +NV+ F
Sbjct: 124 DDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVF 170
>AK100585
Length = 197
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA L+ + + ++ENV ++W+ ELK H + I+LVG K DLR
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 123
Query: 131 --------HLRAVSTEDAKAFAEKEN---TFFMETSALESMNVENAF 166
H V A+ ++ +++E S+ +NV+ F
Sbjct: 124 DDKQFFVDHPGVVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVF 170
>Os06g0687100 Ras GTPase family protein
Length = 98
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 16 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYR 75
VL+GD G GK++++ RF + + +STIG F ++ + +D+ VK IWDTAGQERY
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYH 68
Query: 76 AITSAYYRGAVGALVVYDVTRHVTFE 101
++ YYRGA A+VVYD++ V +
Sbjct: 69 SLAPMYYRGAAAAVVVYDISSTVIIK 94
>Os02g0312600 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA L+ + + ++EN+ ++W+ EL+ H N+ I+LVG K DLR
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
Query: 131 H----------LRAVSTEDAKAFAEKEN-TFFMETSALESMNVENAF 166
L +ST + ++E S+ NV++ F
Sbjct: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
>Os05g0513800 Small GTP-binding protein OsRac2
Length = 214
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD +V +WDTAGQ
Sbjct: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVSVDGNIVNLGLWDTAGQ 65
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA ++ + + ++ENV ++WM EL+ N+ I+LVG K DLR
Sbjct: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
Query: 131 HLRA 134
R+
Sbjct: 125 DHRS 128
>Os01g0229400 Small GTP-binding protein OsRac1
Length = 214
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD VV +WDTAGQ
Sbjct: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVE-RWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA ++ + + ++ENV+ +WM EL+ + ++LVG K DLR
Sbjct: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
Query: 131 HLRA 134
RA
Sbjct: 128 EDRA 131
>Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 (GTPase protein
ROP10)
Length = 215
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N+F + T+ F+ + VD V +WDTAGQ
Sbjct: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVV-VDGTTVNLGLWDTAGQ 66
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA ++ + + ++ENV ++W+ EL+ H + I+LVG K DLR
Sbjct: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQ-HYAPGVPIVLVGTKLDLR 125
Query: 131 --------HLRAVSTEDAKAFAEKEN---TFFMETSALESMNVENAF 166
H V A+ +++ T ++E S+ NV+ F
Sbjct: 126 EDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVF 172
>Os02g0742200 Small GTP-binding protein OsRac3
Length = 214
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N+F + T+ F+ + VD V +WDTAGQ
Sbjct: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-VDSTTVNLGLWDTAGQ 66
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA ++ + + ++EN+ ++W+ EL+ H + I+LVG K DLR
Sbjct: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQ-HYAPGVPIVLVGTKLDLR 125
Query: 131 H----------LRAVSTEDAKAFAEKEN-TFFMETSALESMNVENAFTEVLTQIYHVVSK 179
+ V+T + ++ +++E S+ NV+ F + + +K
Sbjct: 126 EDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFDAAIKVVIQPPTK 185
Query: 180 K 180
+
Sbjct: 186 Q 186
>D17779
Length = 103
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 ADDDYDYLFKVVLIGDSGVGK-SNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKA 63
A+DDYDYLFKVVLIGDSG + L + + S+ VD K VKA
Sbjct: 25 AEDDYDYLFKVVLIGDSGDRQVQPXLPLHPQRVQPSIPSPPSASSSSPGSLQVDGKXVKA 84
Query: 64 QIWDTAGQERYRAITSAYY 82
QIWDT Q RYRAITSAYY
Sbjct: 85 QIWDTVXQXRYRAITSAYY 103
>Os02g0834000 Similar to Rop4 small GTP binding protein
Length = 195
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTA
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTA-- 62
Query: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
E Y + YRGA L+ + + ++ENV ++W+ EL+ H + I+LVG K DLR
Sbjct: 63 EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELR-HYAPGVPIILVGTKLDLR 121
>Os05g0105200 Similar to Ras-related protein Rab-1B
Length = 116
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 99 TFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALE 158
+F NV++W+ E+ + ++ +LVGNK DL + V TE+AKAFAE F+ETSA E
Sbjct: 5 SFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLETSAKE 64
Query: 159 SMNVENAF 166
S+NVE AF
Sbjct: 65 SINVEEAF 72
>AK110439
Length = 508
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 52 RSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELK 111
++ +D V I DTAGQE Y A+ Y G L+ Y + ++E + +++
Sbjct: 355 KTCTIDGLVTVIDILDTAGQEEYAAMRDTYIAGGESFLLTYAINSLHSYEETASFYKQIL 414
Query: 112 DHTDA-NIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVL 170
D + I+LV NK DL R V E A+ A++ F ETSA +N+E F E +
Sbjct: 415 RIKDCDSFPIVLVANKCDLEKQRQVPEEQARQQAKQWKVQFFETSAYMKINIEEIFFEAV 474
Query: 171 TQI--YHVVSKKALDIGDDP 188
+I Y ++ A + G P
Sbjct: 475 REIRRYDAAAESARNGGKPP 494
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,346,050
Number of extensions: 218584
Number of successful extensions: 835
Number of sequences better than 1.0e-10: 60
Number of HSP's gapped: 808
Number of HSP's successfully gapped: 60
Length of query: 217
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 120
Effective length of database: 11,971,043
Effective search space: 1436525160
Effective search space used: 1436525160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)