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Os01g0750000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ras-related protein RIC2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.18 (0.0463) R2 : 0.445
β1 : -2.83 (0.174) R2dD : 0.352 R2D : 0.177
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.98 (0.147) R2dE : 0.235 R2E : 0.0956
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.451 (0.0989) R2dN8 : 0.0338 R2N8 : -0.0109
σ : 0.865
deviance : 345.15
__
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C
peak time of C : --
E
wheather : temperature
threshold : 26.3
memory length : 1068
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
319.47 0.84 6.43 -5.05 0.476 2.77 1.21 -10.8 -0.647 22.4 27.86 1256 -- --
372 0.898 6.27 -2.87 0.591 2.19 1.17 -- -0.774 22.5 8.149 1341 -- --
324.04 0.838 6.41 -4.91 0.489 2.72 -- -9.91 -0.625 21.2 27.8 1243 -- --
336.02 0.854 6.17 -2.81 0.514 1.57 -- -- -0.327 21.3 27.94 1213 -- --
334.47 0.852 6.39 -4.64 -- 2.77 -- -8.77 -0.711 -- 27.09 1143 -- --
445.73 0.99 6.18 -2.24 0.688 -- 1.41 -- -0.385 23.1 -- -- -- --
453.51 0.997 6.18 -2.29 0.695 -- -- -- -0.387 22.4 -- -- -- --
345.15 0.865 6.18 -2.83 -- 1.98 -- -- -0.451 -- 26.3 1068 -- --
519.47 1.06 6.06 -- 0.566 1.27 -- -- 0.154 21.2 31.9 1091 -- --
483.09 1.03 6.16 -2.28 -- -- -- -- -0.385 -- -- -- -- --
591.96 1.14 6.12 -- 0.683 -- -- -- -0.132 22.2 -- -- -- --
536.05 1.08 6.05 -- -- 1.32 -- -- 0.121 -- 32.1 1049 -- --
620.24 1.16 6.1 -- -- -- -- -- -0.132 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 329.53 humidity 70 720 < th dose independent rect. 18 2
12 329.81 humidity 70 720 < th dose independent rect. 18 14
27 330.70 temperature 30 720 > th dose dependent rect. 18 15
28 331.04 temperature 25 720 > th dose dependent rect. 17 6
30 332.21 temperature 30 1440 > th dose dependent rect. 18 1
46 332.54 radiation 1 720 > th dose dependent rect. 18 11
47 332.90 temperature 30 1440 < th dose independent sin 12 NA
48 332.97 temperature 30 1440 > th dose dependent sin 12 NA
49 333.00 humidity 70 720 > th dose independent rect. 18 8
52 333.20 humidity 80 720 < th dose dependent rect. 18 2
54 333.34 temperature 30 1440 > th dose independent sin 12 NA
55 333.35 humidity 70 1440 < th dose dependent rect. 18 14
56 333.44 temperature 30 1440 > th dose dependent rect. 14 5
70 333.45 temperature 30 1440 > th dose dependent rect. 14 20
122 334.06 radiation 1 720 > th dose dependent rect. 18 1
137 334.49 temperature 30 1440 < th dose independent rect. 15 21
178 334.99 temperature 30 1440 < th dose independent rect. 18 22
185 335.12 temperature 25 1440 > th dose dependent rect. 16 1
186 335.14 humidity 50 1440 < th dose independent rect. 16 1
191 335.41 temperature 30 1440 < th dose independent rect. 9 16
193 335.43 temperature 30 1440 < th dose independent rect. 9 18
194 335.44 temperature 30 1440 < th dose independent rect. 9 22
200 335.49 humidity 50 1440 < th dose dependent rect. 16 1
206 335.53 temperature 30 1440 < th dose independent rect. 9 14
208 335.55 temperature 30 1440 < th dose independent rect. 9 10
212 335.60 humidity 50 1440 > th dose independent rect. 16 1
217 335.71 temperature 30 1440 > th dose independent rect. 15 21
227 335.82 temperature 30 1440 > th dose independent rect. 13 23
247 335.90 temperature 30 1440 < th dose independent rect. 6 19
257 335.95 temperature 30 1440 < th dose independent rect. 20 23
262 335.96 temperature 30 1440 > th dose independent rect. 17 23
263 335.96 temperature 30 1440 < th dose independent rect. 2 23
273 335.99 temperature 30 1440 > th dose independent rect. 15 4
290 336.00 temperature 30 1440 < th dose independent no NA NA
293 336.00 temperature 30 1440 < th dose independent rect. 24 23
306 336.03 temperature 30 1440 < th dose independent rect. 6 13
320 336.07 temperature 30 1440 > th dose independent rect. 9 10
355 336.10 temperature 30 1440 < th dose independent rect. 2 17
416 336.25 temperature 30 1440 > th dose independent rect. 15 19
446 336.29 temperature 30 720 > th dose independent rect. 18 15
452 336.33 temperature 30 1440 < th dose independent rect. 11 23
459 336.42 temperature 30 1440 < th dose independent rect. 15 10
464 336.46 temperature 30 1440 < th dose independent rect. 15 12
487 336.53 radiation 30 14400 < th dose independent rect. 16 11
491 336.55 temperature 30 1440 < th dose independent rect. 15 17
533 336.67 temperature 30 1440 > th dose dependent no NA NA
640 336.77 temperature 30 1440 < th dose independent rect. 15 4
655 336.92 temperature 30 1440 > th dose independent no NA NA
748 336.92 temperature 30 1440 > th dose dependent rect. 17 23
755 337.02 radiation 30 14400 < th dose independent rect. 16 9
817 337.32 humidity 70 720 > th dose independent sin 11 NA
858 337.51 humidity 60 1440 > th dose independent rect. 17 11
876 337.61 temperature 30 1440 < th dose independent rect. 13 12
879 337.63 temperature 30 1440 < th dose independent rect. 13 14
882 337.64 humidity 60 1440 > th dose independent rect. 17 3
888 337.68 temperature 30 1440 < th dose independent rect. 13 18
917 337.80 temperature 30 1440 < th dose independent rect. 13 6
999 338.00 humidity 60 1440 > th dose independent rect. 17 15