Os09g0527600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GTP-binding protein (Fragment).
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Os09g0527600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GTP-binding protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.4 | 0.58 | 8.41 | -1.49 | 1.17 | -3.36 | -1.54 | -5.04 | -0.468 | 21 | 20.16 | 221 | -- | -- |
| 157.96 | 0.585 | 8.46 | -1.49 | 1.16 | -1.33 | -1.34 | -- | -0.49 | 21.1 | 21.38 | 237 | -- | -- |
| 160.38 | 0.59 | 8.41 | -1.41 | 1.19 | -3.13 | -- | -4.79 | -0.461 | 20.9 | 20.29 | 208 | -- | -- |
| 164.82 | 0.598 | 8.46 | -1.45 | 1.2 | -1.25 | -- | -- | -0.491 | 20.8 | 21.56 | 201 | -- | -- |
| 237.09 | 0.717 | 8.39 | -1.43 | -- | -3.04 | -- | -4.1 | -0.496 | -- | 20.43 | 328 | -- | -- |
| 172.29 | 0.615 | 8.43 | -1.25 | 1.19 | -- | -1.36 | -- | -0.371 | 20.7 | -- | -- | -- | -- |
| 178.16 | 0.625 | 8.43 | -1.2 | 1.2 | -- | -- | -- | -0.369 | 20.5 | -- | -- | -- | -- |
| 231.62 | 0.709 | 8.44 | -1.51 | -- | -1.32 | -- | -- | -0.575 | -- | 35.57 | 593 | -- | -- |
| 213.49 | 0.684 | 8.41 | -- | 1.22 | -0.514 | -- | -- | -0.274 | 20.6 | 21.56 | 201 | -- | -- |
| 258.48 | 0.751 | 8.4 | -1.21 | -- | -- | -- | -- | -0.381 | -- | -- | -- | -- | -- |
| 216.17 | 0.688 | 8.4 | -- | 1.2 | -- | -- | -- | -0.235 | 20.4 | -- | -- | -- | -- |
| 286.87 | 0.789 | 8.39 | -- | -- | -0.771 | -- | -- | -0.34 | -- | 35.71 | 561 | -- | -- |
| 296.85 | 0.804 | 8.37 | -- | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.90 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 2 | 143.54 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 4 | 143.74 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 7 | 143.95 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 20 | 144.61 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 64 | 147.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 14 |
| 67 | 147.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 68 | 147.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 72 | 147.29 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 75 | 147.39 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 92 | 147.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 95 | 147.82 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 98 | 147.91 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 100 | 147.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 113 | 148.28 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 118 | 148.38 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 135 | 148.63 | wind | 1.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 175 | 149.05 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 186 | 149.17 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 189 | 149.19 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 13 |
| 208 | 149.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 210 | 149.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 218 | 149.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 233 | 149.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 242 | 149.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 15 |
| 259 | 149.97 | wind | 9.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 261 | 150.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 267 | 150.05 | wind | 5.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 274 | 150.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 288 | 150.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 7 |
| 296 | 150.28 | wind | 7.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 297 | 150.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 316 | 150.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 22 |
| 331 | 150.60 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 333 | 150.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 343 | 150.66 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 17 |
| 352 | 150.72 | wind | 7.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 356 | 150.76 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 395 | 150.88 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 404 | 150.90 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 407 | 150.91 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 412 | 150.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 466 | 151.15 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 470 | 151.16 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 522 | 151.35 | wind | 7.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 526 | 151.38 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 554 | 151.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 559 | 151.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 566 | 151.52 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 592 | 151.62 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 593 | 151.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 11 |
| 600 | 151.64 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 609 | 151.68 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 15 | 2 |
| 632 | 151.74 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 657 | 151.82 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 663 | 151.83 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 19 |
| 667 | 151.83 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 19 |
| 677 | 151.87 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 10 |
| 678 | 151.87 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 682 | 151.90 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 718 | 152.00 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 729 | 152.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 764 | 152.18 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 770 | 152.21 | temperature | 20.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 771 | 152.21 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 776 | 152.23 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 794 | 152.30 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 801 | 152.32 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 813 | 152.32 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 890 | 152.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 913 | 152.53 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 915 | 152.54 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 925 | 152.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 7 |
| 930 | 152.59 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 932 | 152.59 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 933 | 152.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 961 | 152.66 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 969 | 152.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 4 |