BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0843100 Os03g0843100|AK111499
(223 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0843100 Ras GTPase family protein 424 e-119
Os05g0105100 Similar to Small GTPase rab11-related 310 4e-85
Os03g0823700 Similar to Ras-related protein Rab11C 303 7e-83
Os01g0848700 Similar to Ras-related protein Rab11C 302 1e-82
Os09g0327100 Similar to GTP-binding protein 295 3e-80
Os06g0551400 Ras-related protein RIC2 290 5e-79
AF327517 290 5e-79
Os05g0564400 Similar to GTP-binding protein 290 7e-79
Os05g0516800 Similar to Ras-related protein RIC2 285 1e-77
AK060246 283 7e-77
Os01g0750000 Similar to Ras-related protein RIC2 282 2e-76
Os05g0280200 Similar to Ras-related protein Rab11A 279 1e-75
Os01g0667600 Similar to GTP-binding protein 276 1e-74
Os10g0377400 Similar to Ras-related protein Rab11D 269 1e-72
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 247 5e-66
Os08g0525000 Ras GTPase family protein 235 2e-62
Os09g0527600 Similar to GTP-binding protein (Fragment) 224 4e-59
Os06g0714600 Ras GTPase family protein 216 1e-56
Os01g0558600 Ras-related protein RIC1 194 6e-50
Os01g0179700 Similar to GTP-binding protein YPTM2 189 2e-48
Os02g0653800 Similar to GTP-binding protein 189 2e-48
AK062838 187 5e-48
Os04g0470100 Similar to Small GTP binding protein Rab2 186 2e-47
AK060839 178 3e-45
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 172 1e-43
Os05g0461300 Similar to RAB8C 172 1e-43
Os03g0819900 Similar to RAB8C 172 1e-43
Os03g0151900 Similar to Small GTP-binding protein 160 5e-40
Os10g0441800 Similar to RAB5B 159 2e-39
Os03g0666500 Similar to Ras-related protein RHA1 154 6e-38
Os12g0631100 Ras small GTPase, Ras type family protein 152 2e-37
Os03g0146000 Similar to RAB1X 151 3e-37
Os10g0456600 Ras GTPase family protein 149 1e-36
Os07g0195100 Similar to Ras-related protein ARA-3 148 4e-36
Os10g0208000 147 4e-36
Os05g0516600 Small GTP binding protein 135 3e-32
Os07g0496000 Similar to Nt-rab6 protein 131 5e-31
Os01g0227300 Similar to RAB7D 126 2e-29
Os05g0341600 Similar to Ras-related protein Rab-21 125 3e-29
Os01g0714900 Similar to RAB7A 125 3e-29
Os05g0536900 Similar to RAB7A 124 6e-29
Os09g0281700 Similar to Ras-related protein RGP1 (GTP-bindi... 104 6e-23
AK104720 101 5e-22
Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (... 97 8e-21
Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (... 96 1e-20
Os01g0611100 Similar to GTP-binding nuclear protein Ran-2 96 2e-20
Os02g0312600 Similar to Small GTP-binding protein (Fragment) 95 5e-20
Os05g0513800 Small GTP-binding protein OsRac2 91 6e-19
AK100585 87 8e-18
Os01g0229400 Small GTP-binding protein OsRac1 87 1e-17
Os02g0120800 Similar to Small GTP-binding protein (Fragment) 87 1e-17
Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 ... 85 4e-17
AK111978 84 1e-16
Os02g0742200 Small GTP-binding protein OsRac3 80 1e-15
Os06g0687100 Ras GTPase family protein 79 2e-15
Os02g0834000 Similar to Rop4 small GTP binding protein 78 5e-15
D17779 70 1e-12
Os05g0105200 Similar to Ras-related protein Rab-1B 70 1e-12
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/223 (94%), Positives = 210/223 (94%)
Query: 1 MARRPAPWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTI 60
MARRPAPWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTI
Sbjct: 1 MARRPAPWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTI 60
Query: 61 QVEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA 120
QVEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA
Sbjct: 61 QVEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA 120
Query: 121 DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY 180
DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY
Sbjct: 121 DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY 180
Query: 181 RIISKKXXXXXXXXXXXXXVREGQSIQVSATDSSSFTSRCCSF 223
RIISKK VREGQSIQVSATDSSSFTSRCCSF
Sbjct: 181 RIISKKALAADEAGAGAGAVREGQSIQVSATDSSSFTSRCCSF 223
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 310 bits (795), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
+EYDYLFK+VLIGDSGVGKSNLLSRFTRN F L+SKSTIGVEFATRT+ VEGKI+KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 68
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGA+GA+LVYDV+K TTF+N+ RWLKELRDHAD+NI +ML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLVGNK 128
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXX-X 191
DLKHLR+V+ +DA FAE EGLS++ETSAL+ATNV++AFQ +L +IYR ISKK
Sbjct: 129 TDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 188
Query: 192 XXXXXXXXVREGQSIQVSATDSSSFTSRCCS 222
V+EG++I V+A D++S +CCS
Sbjct: 189 GGAGAAGGVKEGKTINVAAGDANSEKKQCCS 219
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 303 bits (776), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 172/211 (81%), Gaps = 4/211 (1%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
+EYDYLFKIVLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFATRT+Q+EG+ +KAQIW
Sbjct: 7 NEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIW 66
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLVYD+TK TFEN++RWL+ELRDHADSNIV+M++GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNK 126
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL HLRSV ED + AE+EGLSF+ETSAL+A NV+KAFQT+L +I++IISKK
Sbjct: 127 SDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQE 186
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSR-CCS 222
Q ++ TDS+ T R CCS
Sbjct: 187 AAGSGPPT---QGTTINVTDSAVNTKRGCCS 214
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 302 bits (773), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 174/210 (82%), Gaps = 1/210 (0%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
+EYDYLFKIVLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFATRT+Q+EGK +KAQIW
Sbjct: 7 NEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIW 66
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLV+D+TK TF+NV+RWL+ELRDHAD+NIVVM++GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNK 126
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL HLRSV ED +F+E+EGLSF+ETSAL+A NV+KAF TVL+EI++I+SKK
Sbjct: 127 SDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQE 186
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSRCCS 222
+G +I V+ +++ S CCS
Sbjct: 187 SASTNGRSMQGTTINVAEAPAATKGS-CCS 215
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 295 bits (754), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 170/212 (80%), Gaps = 5/212 (2%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+V+ K+VKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGAL+VYDVT+ TFENV+RWLKELRDH D+NIV+ML+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 126
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HLR+VS+EDA FAERE F+ETSAL++ NV+ AF VLT+IYR++SKK
Sbjct: 127 ADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD 186
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSR--CCS 222
GQ+I V D S + CCS
Sbjct: 187 DPAAPP---RGQTINVGGKDDVSAVKKSGCCS 215
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 290 bits (742), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR++QV+GK+VKAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLVYDVT+ +TFENV+RWLKELRDH D NIVVML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HL +V ++ +FAERE L F+ETSAL++TNV+ AF VLT+IYRI+SK+
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGD 188
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSRCCS 222
+G+ I + S+ CCS
Sbjct: 189 DAGSGPG--KGEKINIKDDVSAVKKGGCCS 216
>AF327517
Length = 217
Score = 290 bits (742), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR++QV+GK+VKAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLVYDVT+ +TFENV+RWLKELRDH D NIVVML+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HL +V ++ +FAERE L F+ETSAL++TNV+ AF VLT+IYRI+SK+
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGD 188
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSRCCS 222
+G+ I + S+ CCS
Sbjct: 189 DAGSGPG--KGEKINIKDDVSAVKKGGCCS 216
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 290 bits (741), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 169/212 (79%), Gaps = 5/212 (2%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I V+ K+VKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGAL+VYDVT+ TFENV+RW++EL+DH D+NIV+ML+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNK 126
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HLR+VS EDA +FAE+E F+ETSAL++ NV+ AF VLT+IY ++SKK
Sbjct: 127 ADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD 186
Query: 193 XXXXXXXVREGQSIQVSATDSSSFT--SRCCS 222
+GQ+I V D S S CCS
Sbjct: 187 DPAAPP---KGQTINVGGKDDVSAVKKSACCS 215
>Os05g0516800 Similar to Ras-related protein RIC2
Length = 220
Score = 285 bits (730), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK+VLIGDSGVGKSNLLSRFT+N FSL+SKSTIGVEFATR++QV+GK++KAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV RWL+ELRDH D +IV MLIGNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNK 131
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HL +VS ED FAE E + F+ETSALDATNVD AF VLT+IY+I++KK
Sbjct: 132 SDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPE 191
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSR--CCS 222
G+ +++ D S R CCS
Sbjct: 192 DGSAG----PGKGEKINVKDDVSAMKRVGCCS 219
>AK060246
Length = 220
Score = 283 bits (724), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK+VLIGDSGVGKSNLLSRFT+N FSL+SKSTIGVEFATR++QV+GK++KAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLVYDVT+ F+NV RWL+ELRDH D +IV MLIGNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRAAFDNVGRWLRELRDHTDPSIVCMLIGNK 131
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HL +VS ED FAE E + F+ETSALDATNVD AF VLT++Y+I++KK
Sbjct: 132 SDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQMYQIVNKKPVEAPE 191
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSR--CCS 222
G+ +++ D S R CCS
Sbjct: 192 DGSAG----PGKGEKINVKDDVSAMKRVGCCS 219
>Os01g0750000 Similar to Ras-related protein RIC2
Length = 221
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
D+YDYLFK VLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATR+IQV+GK+VKAQIW
Sbjct: 13 DDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIW 72
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV RWLKELRDH D +IVVML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNK 132
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HL +VS ED +AE E L F+ETSALDATNV+ AF VLT+IY+ +SKK
Sbjct: 133 SDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTVEASD 192
Query: 193 XXXXXXXVREGQSIQVSATDSSSFTSRCCS 222
+G+ I V S+ CCS
Sbjct: 193 DGSNAPI--KGEKINVKDDVSALKRIGCCS 220
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 279 bits (714), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 174/212 (82%), Gaps = 6/212 (2%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
EY YLFK+VLIGDSGVGKSN+LSRFTRN FSLDSKSTIGVEFAT+++Q+EGK +KAQIWD
Sbjct: 8 EYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWD 67
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQERYRAITSAYYRGAVGALLVYD+TK +F+NV RWL+ELRDHADS+IV+M++GNK
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKS 127
Query: 134 DLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXXX 193
DL HLR+VS ++ + AE+EGL F+ETSA++A NV++AFQT++TE+Y I+++K
Sbjct: 128 DLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEA 187
Query: 194 XXXXXXV-REGQSIQVSATDSSSFTSR--CCS 222
+ +G++I + DS++ ++ CCS
Sbjct: 188 AAASAPLPSQGKTISI---DSAAGNTKRACCS 216
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 167/213 (78%), Gaps = 6/213 (2%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
+EYDYLFK+VLIGDSGVGKSNLLSRF R+ FSL+++STIGVEFAT+T++V+ ++VKAQIW
Sbjct: 14 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIW 73
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRAITSAYYRGAVGAL+VYDVT+ TFEN +RWLKELRDH D+NIVVML+GNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNK 133
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXX 192
DL+HLR+V EDA +FAE G +ETSAL+ATNV+ AF VL +IYR++S+
Sbjct: 134 ADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIGD 193
Query: 193 XXXXXXXVREGQSIQVSATD---SSSFTSRCCS 222
G++I VSA D + +S CCS
Sbjct: 194 DPAAPP---RGRTIDVSAKDDAVTPVNSSGCCS 223
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 269 bits (687), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 160/212 (75%)
Query: 11 GGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQ 70
GG++ DY+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TRT+ ++ K VKAQ
Sbjct: 3 GGEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQ 62
Query: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIG 130
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TK +F+++ RWL+ELR HAD NIV+ML+G
Sbjct: 63 IWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVG 122
Query: 131 NKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXX 190
NK DL+ R+VS EDA FAE+E L F+ETSAL ATNV+ AFQTVL+EI++I SKK
Sbjct: 123 NKSDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAA 182
Query: 191 XXXXXXXXXVREGQSIQVSATDSSSFTSRCCS 222
G+ + V S+CCS
Sbjct: 183 DPKANGAAPSLAGKKVVVPGPAQEIPKSKCCS 214
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 247 bits (630), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 157/215 (73%), Gaps = 4/215 (1%)
Query: 12 GDE---YDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVK 68
GDE DYLFKIVL+GDS VGKSNLL+RF RN F +SKSTIGVEF T+ + ++GK +K
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVML 128
AQIWDTAGQER+RA+TSAYYRGAVGALLVYD+++ TF++V RWL EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 129 IGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXX 188
+GNK DLKH R VS + + AE +GL F+ETSALD++NV +AFQTV+ EIY I+S+K
Sbjct: 125 VGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVF 184
Query: 189 XXXXXXXXXXXVREGQSIQVSATDSSSFTSR-CCS 222
+ G+ + +S ++ + R CCS
Sbjct: 185 QSQEQKRSEQSLSNGKPVMLSDSNEPTSGGRWCCS 219
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 235 bits (599), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 143/178 (80%)
Query: 9 EQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVK 68
E G+ +YLFK+V+IGDS VGKSNLLSR+ RN F+L SK+TIGVEF T+++ + GK VK
Sbjct: 4 ESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVK 63
Query: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVML 128
AQIWDTAGQER+RA+TSAYYRGA GALLVYD+++ +TF+NV RWL+EL H+D+ + ML
Sbjct: 64 AQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKML 123
Query: 129 IGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
+GNK DL ++R V +E+ + AE EGL F+ETSALD+TNV AF+ V+ EIY +S+K
Sbjct: 124 VGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRK 181
>Os09g0527600 Similar to GTP-binding protein (Fragment)
Length = 239
Score = 224 bits (571), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
E DY+FK+V++GDS VGK+ LL RFT++ F LDSKSTIGVEF TRT+ + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQERYRA+TSAYYRGA+GA++VYD+T+ TFENV RW++ELR HAD + VV LIGNK
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 134 DLK-HLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
D+ R V+ ++A FAE +GL F E SAL NVD+AF T+L EI+ ++S++
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRR 191
>Os06g0714600 Ras GTPase family protein
Length = 225
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 141/174 (81%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
+E DY+FK+V+IGDS VGK+ LL RFT++ F +DSKSTIG+EF TRT+++ GK VKAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQERYRA+TSAYYRGA+GA+LVYDVT +F + RWL +LR HAD++IVVMLIGNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNK 121
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
DL H R+V+ ++A +FAE +GL F E SAL NV++AF +L EI+ I+S++
Sbjct: 122 ADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRR 175
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 194 bits (492), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/166 (57%), Positives = 121/166 (72%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
EYDYLFK++LIGDSGVGKS LL RF +S+ STIGV+F RT++ +GK +K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQER+R ITS+YYRGA G ++VYDVT +F NVK+WL E+ +A N+ +L+GNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 134 DLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEI 179
DL R VS E + A+ G+ F+ETSA DATNV+KAF T+ EI
Sbjct: 124 DLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 124/167 (74%), Gaps = 2/167 (1%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSK-STIGVEFATRTIQVEGKIVKAQIW 72
EYDYLFK++LIGDSGVGKS LL RF +S+ LDS STIGV+F RT++ +GK +K QIW
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSY-LDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQER+R ITS+YYRGA G ++VYDVT +F NVK+WL E+ +A N+ +L+GNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK 122
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEI 179
DL + VS E A +FA+ G+ F+ETSA +ATNV++AF + I
Sbjct: 123 SDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASI 169
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 124/167 (74%), Gaps = 2/167 (1%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSK-STIGVEFATRTIQVEGKIVKAQIW 72
EYDYLFK++LIGDSGVGKS LL RF +S+ LDS STIGV+F RT++ +GK +K QIW
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSY-LDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQER+R ITS+YYRGA G ++VYDVT +F NVK+WL E+ +A N+ +L+GNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK 122
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEI 179
DL + VS E A +FA+ G+ F+ETSA +ATNV++AF + I
Sbjct: 123 SDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASI 169
>AK062838
Length = 201
Score = 187 bits (475), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 122/168 (72%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
EYDYLFK++LIGDSGVGKS LL RF ++++ STIGV+F RTI+++GK +K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQER+R ITS+YYRGA G ++VYDVT +F NVK+WL E+ +A N+ +L+GNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 134 DLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYR 181
DL R VS + A FAE G+ F+ETSA +A NV+ AF + +I +
Sbjct: 124 DLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVETAFMMMAAQIKK 171
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 117/169 (69%)
Query: 15 YDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDT 74
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I V+ + VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDT 62
Query: 75 AGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKID 134
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++ WL++ R HA++N+ +ML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKSD 122
Query: 135 LKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRII 183
L H R+VS E+ FA+ GL F+E SA A NV++AF IY+ I
Sbjct: 123 LSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKI 171
>AK060839
Length = 209
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 119/169 (70%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
+E+DYLFK++LIGDS VGKS L RF +S+ STIGV+F RTI+++GK +K QIW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQIW 62
Query: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
DTAGQER+R ITS+YYRGA G ++VYD+T +F NVK W+ E+ +A+ ++ +L+GNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKEWMSEIDKYANDSVCKLLVGNK 122
Query: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYR 181
DL R V A ++A+ G+ F+ETSA D+ NV++AF + I +
Sbjct: 123 CDLAESRVVETAVAQAYADEIGIPFLETSAKDSINVEEAFLAMCAAIKK 171
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
+YDYL K++LIGDSGVGKS LL RF+ SF+ +TIG++F RTI+++GK +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQER+R IT+AYYRGA+G LLVYDVT ++F N++ W++ + HA N+ +L+GNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 134 DL-KHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEI 179
D+ + R+V + A+ G+ F ETSA NV++ F ++ +I
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDI 177
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
+YDYL K++LIGDSGVGKS LL RF+ SF+ +TIG++F RTI+++GK +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQER+R IT+AYYRGA+G LLVYDVT ++F N++ W++ + HA N+ +L+GNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 134 DL-KHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEI 179
D+ + R+V + A+ G+ F ETSA NV++ F ++ +I
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDI 177
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 122/173 (70%), Gaps = 1/173 (0%)
Query: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
+YDYL K++LIGDSGVGKS LL RF+ SF+ +TIG++F RT++++GK +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
TAGQER+R IT+AYYRGA+G LLVYDVT ++F N++ W++ + HA N+ +L+GNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 134 DL-KHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISK 185
D+ + R+V + A+ G+ F ETSA NV++ F ++ +I + +S+
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSE 183
>Os03g0151900 Similar to Small GTP-binding protein
Length = 199
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Query: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVE-GKIVKAQI 71
D D K+VL+GDSGVGKS ++ RF R F SK T+G F ++T+ +E IVK +I
Sbjct: 26 DSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEI 85
Query: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGN 131
WDTAGQERY A+ YYRGA A++VYD+T +F + W+KEL+ H +I+++L+GN
Sbjct: 86 WDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGN 145
Query: 132 KIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYR 181
K DL R VS ++A +AE+ + F+ETSA A N+++ F+ + + R
Sbjct: 146 KADLHENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLPR 195
>Os10g0441800 Similar to RAB5B
Length = 250
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 11 GGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVE-GKIVKA 69
G D + K+VL+GDSGVGKS ++ RF R F SK T+G F ++T+ +E VK
Sbjct: 75 GTDLKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKF 134
Query: 70 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLI 129
+IWDTAGQERY A+ YYRGA A++VYD+T + +F + W+KEL+ H ++++ L+
Sbjct: 135 EIWDTAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPDMIMALV 194
Query: 130 GNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYR 181
GNK DL RSVS +DA +AER + F+ETSA A N+++ F+ + + R
Sbjct: 195 GNKADLHDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLPR 246
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 103/153 (67%)
Query: 20 KIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQER 79
K+VL+GD G GKS+L+ RF + F +STIG F ++T+ V + VK +IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 80 YRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHLR 139
Y ++ YYRGA A++VYD+T +F K+W++EL+ +S+ VV L GNK DL R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETR 132
Query: 140 SVSLEDATSFAEREGLSFVETSALDATNVDKAF 172
V +E+A ++A+ GL F+ETSA ATNV+ F
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIF 165
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 102/156 (65%)
Query: 20 KIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQER 79
K+VL+GD G GKS+L+ RF + F +STIG F ++T+ V + VK +IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 80 YRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHLR 139
Y ++ YYRGA A++VYD+T A +F K+W++EL+ + N ++ L GNK D+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 140 SVSLEDATSFAEREGLSFVETSALDATNVDKAFQTV 175
V E+A ++A+ GL F+ETSA A NV+ F +
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEI 168
>Os03g0146000 Similar to RAB1X
Length = 210
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 9/187 (4%)
Query: 1 MARRPAPWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDS-KSTIGVEFATRT 59
MA PA YD FKI+LIGDS VGKS+LL F S D TIGV+F +
Sbjct: 1 MASSPA------SSYDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKF 54
Query: 60 IQVEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKR-WLKELRD 118
+ V GK +K IWDTAGQER+R ITS+YYRGA G +LVYDVTK +F N+ W KE+
Sbjct: 55 LTVNGKKLKLTIWDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIEL 114
Query: 119 HA-DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLT 177
H+ + + ML+GNK+D R V+ E+ +FA+ G F+E+SA NV+K F+ +
Sbjct: 115 HSTNKECIKMLVGNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEKCFEELAL 174
Query: 178 EIYRIIS 184
+I + S
Sbjct: 175 KILEVPS 181
>Os10g0456600 Ras GTPase family protein
Length = 222
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 115/176 (65%), Gaps = 6/176 (3%)
Query: 15 YDYLFKIVLIGDSGVGKSNLLSRFTRNSFSL----DSKSTIGVEFATRTIQVEGKIVKAQ 70
++ FKI+LIGDSGVGKS+LL F + + D TIGV+F + + + GK +K
Sbjct: 16 HECSFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLT 75
Query: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKR-WLKELRDH-ADSNIVVML 128
IWDTAGQER+R ITS+YYRGA G +LVYDVTK +F N+ W KE+ H ++ + + ML
Sbjct: 76 IWDTAGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKML 135
Query: 129 IGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIIS 184
+GNKID + R+V+ E+ +FAE G F+E+SA NV+K F+ + +I + S
Sbjct: 136 VGNKIDKEDERTVTREEGLAFAEESGCLFLESSAKTRDNVEKCFEELALKIMDVPS 191
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 123/199 (61%), Gaps = 15/199 (7%)
Query: 29 VGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQERYRAITSAYY 88
+GKS LL RF+ ++F+ +TIG++F RT++++GK VK QIWDTAGQER+R IT+AYY
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 89 RGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHLRSVSLEDATS 148
RGA+G LLVYDVT ++F N++ W++ + HA N+ +L+GNK+D+ R VS
Sbjct: 144 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVDMDTKRVVSTAQGQK 203
Query: 149 FAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKXXXXXXXXXXXXXVREGQSIQV 208
A+ G+ F ETSA NV++ F T+ +I + +++ E +IQ+
Sbjct: 204 LADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRLTETVAAAA----------EPPTIQI 253
Query: 209 S--ATDSSSFTSR---CCS 222
S D ++ +SR CC+
Sbjct: 254 SRQEPDQAAASSRWSACCN 272
>Os10g0208000
Length = 355
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Query: 15 YDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDT 74
Y Y FK V IGD+GVGKS LL +FT F T GVE+ + V+GK K QIWDT
Sbjct: 5 YAYRFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDT 64
Query: 75 AGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKID 134
AGQE +R IT +YYRG LLVYD+T WL++ HA + + ++LIGNK D
Sbjct: 65 AGQEAFRCITRSYYRGNAACLLVYDITS---------WLEDATQHASARMTIILIGNKCD 115
Query: 135 LKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRII 183
L H R VS ++ FA+ GL F+E SA A NV+KAF +++ I
Sbjct: 116 LSHRRVVSYQEGEQFAKEHGLLFMEASAKTAHNVEKAFILAARTVHKKI 164
>Os05g0516600 Small GTP binding protein
Length = 206
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 7/166 (4%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
L K++++GDSGVGK++L++++ FS K+TIG +F T+ +Q E ++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADS----NIVVMLIGNKI 133
ER++++ A+YRGA +LVYDV +F+N+ W +E A N +L+GNK+
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLLGNKV 127
Query: 134 DLK--HLRSVSLEDATSFAEREG-LSFVETSALDATNVDKAFQTVL 176
D+ + R VS + A ++ +G + + ETSA D TNV++AFQ ++
Sbjct: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIV 173
>Os07g0496000 Similar to Nt-rab6 protein
Length = 208
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 105/157 (66%)
Query: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQE 78
+K+V +GD VGK+++++RF + F ++TIG++F ++T+ +E + V+ Q+WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 79 RYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHL 138
R+R++ +Y R + A++V+DV +F N +W++E+R S+++++L+GNK DL
Sbjct: 70 RFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDK 129
Query: 139 RSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTV 175
R VS+E+ A+ G+ F+ETSA N+ F+ +
Sbjct: 130 RQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKI 166
>Os01g0227300 Similar to RAB7D
Length = 207
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
L K++++GDSGVGK++L++++ FS K+TIG +F T+ +Q++ ++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADS----NIVVMLIGNKI 133
ER++++ A+YRGA +LVYDV +FE + W +E A N +++GNKI
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
Query: 134 DLK--HLRSVSLEDATSFAEREG-LSFVETSALDATNVDKAFQTV 175
D+ + R+VS + A ++ +G + + ETSA + NV+ AF+ +
Sbjct: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 95/157 (60%)
Query: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQE 78
FK+VL+GD VGK++L+ R+ + FS ++T+ + T+ + VEG + IWDTAGQE
Sbjct: 15 FKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQE 74
Query: 79 RYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHL 138
++ A+ YYR A ALLVYD+T TF V +W+KEL+ A+ +IV+ + NK DL
Sbjct: 75 KFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLVRS 134
Query: 139 RSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTV 175
+ + +A S+AE G + TSA T +D F +
Sbjct: 135 KHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDI 171
>Os01g0714900 Similar to RAB7A
Length = 207
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
L K++++GDSGVGK++L++++ FS K+TIG +F T+ + +E ++V QIWDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSN----IVVMLIGNKI 133
ER++++ A+YRGA +LVYDV +F+ + W E + A + +L+GNKI
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILLGNKI 128
Query: 134 DLKHLRS--VSLEDATSFAEREG-LSFVETSALDATNVDKAFQTV 175
D+ +S VS + A + +G + + ETSA + NVD AF +V
Sbjct: 129 DVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSV 173
>Os05g0536900 Similar to RAB7A
Length = 206
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
L K++++GDSGVGK++L++++ FS K+TIG +F T+ + +E ++V QIWDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADS----NIVVMLIGNKI 133
ER++++ A+YRGA +LVYDV +F + W E A + +L+GNKI
Sbjct: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
Query: 134 DLK--HLRSVSLEDATSFAEREG-LSFVETSALDATNVDKAFQTV 175
D+ + R++ + A + +G + + ETSA D NVD AF +
Sbjct: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
>Os09g0281700 Similar to Ras-related protein RGP1 (GTP-binding regulatory protein
RGP1)
Length = 162
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 58/73 (79%)
Query: 114 KELRDHADSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQ 173
+ LR HAD NIV+MLIGNK DL LR V EDA FAERE L F+ETSAL++TNV+ AF
Sbjct: 50 QRLRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFM 109
Query: 174 TVLTEIYRIISKK 186
TVLTEIYRI+SKK
Sbjct: 110 TVLTEIYRIVSKK 122
>AK104720
Length = 164
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Query: 57 TRTIQVEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKR-WLKE 115
+R + K +K IWDTAGQER+R +TS+YYRGA G ++VYDVT+ TF N+ W KE
Sbjct: 6 SRWLTPVAKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKE 65
Query: 116 LRDHA-DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQT 174
+ ++ + + + ML+GNK+D + R+V+ ++ FA G F+E SA NV++ F+
Sbjct: 66 IDLYSTNQDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEE 125
Query: 175 VLTEI 179
++ +I
Sbjct: 126 LVLKI 130
>Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 226
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQE 78
FK++L+GD G GK+ + R F + TIGVE V+ WDTAGQE
Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQE 77
Query: 79 RYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHL 138
++ + YY A++++DVT T++NV W K++ D NI ++L GNK+D+K+
Sbjct: 78 KFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVCD-NIPIVLCGNKVDMKN- 135
Query: 139 RSVSLEDATSFAEREGLSFVETSALDATNVDKAF 172
R V + T F ++ L + E SA N +K F
Sbjct: 136 RQVKAKMVT-FHRKKNLQYYEISAKSNYNFEKPF 168
>Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 221
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQE 78
FK+V++GD G GK+ + R F + TIGVE ++ WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQE 73
Query: 79 RYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHL 138
++ + YY A++++DVT T++NV W ++L + NI ++L GNK+D+K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
Query: 139 RSVSLEDATSFAEREGLSFVETSALDATNVDKAF 172
R V + T F ++ L + E SA N +K F
Sbjct: 132 RQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPF 164
>Os01g0611100 Similar to GTP-binding nuclear protein Ran-2
Length = 221
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQE 78
FK+V++GD G GK+ + R F + TIGVE ++ WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 79 RYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHL 138
++ + YY A++++DVT T++NV W ++L + NI ++L GNK+D+K+
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN- 131
Query: 139 RSVSLEDATSFAEREGLSFVETSALDATNVDKAF 172
R V + T F ++ L + E SA N +K F
Sbjct: 132 RQVKAKQVT-FHRKKNLQYYEVSAKSNYNFEKPF 164
>Os02g0312600 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N+F D T+ F+ + V+G V +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA LL + + ++EN+ K+W+ ELR +A N+ ++L+G K+DL+
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLR 123
Query: 137 HLRSVSLEDATSFAEREGLSFVETS 161
ED F + GL+ + T+
Sbjct: 124 -------EDKQFFLDHPGLAPISTA 141
>Os05g0513800 Small GTP-binding protein OsRac2
Length = 214
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N F D T+ F+ + V+G IV +WDTAGQ
Sbjct: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVSVDGNIVNLGLWDTAGQ 65
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA +L + + ++ENV K+W+ ELR A N+ ++L+G K+DL+
Sbjct: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 124
Query: 137 HLRSV----SLEDATSFAEREGL-------SFVETSALDATNVDKAFQTVL 176
RS A + A+ E L +++E S+ N+ F T +
Sbjct: 125 DHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVFDTAI 175
>AK100585
Length = 197
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N+F D T+ F+ + V+G V +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA LL + + ++ENV K+W+ EL+ +A + ++L+G K+DL+
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
Query: 137 HLRSVSLEDATSFAEREGLSFVETS 161
+D F + G+ + T+
Sbjct: 124 -------DDKQFFVDHPGVVPITTA 141
>Os01g0229400 Small GTP-binding protein OsRac1
Length = 214
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N F D T+ F+ + V+G +V +WDTAGQ
Sbjct: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA +L + + ++ENV K+W+ ELR A + V+L+G K+DL+
Sbjct: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
Query: 137 HLRS-VSLEDATSFAERE----------GLSFVETSALDATNVDKAFQTVL 176
R+ ++ A+S E ++++E S+ N+ F T +
Sbjct: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAI 178
>Os02g0120800 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N+F D T+ F+ + V+G V +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA LL + + ++ENV K+W+ EL+ +A + ++L+G K+DL+
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLR 123
Query: 137 --------HLRSVSLEDATSFAEREGLS---FVETSALDATNVDKAFQTVL 176
H +V + A R+ + ++E S+ NV F +
Sbjct: 124 DDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAI 174
>Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 (GTPase protein
ROP10)
Length = 215
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N F D T+ F+ + V+G V +WDTAGQ
Sbjct: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVV-VDGTTVNLGLWDTAGQ 66
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDL- 135
E Y + YRGA +L + + ++ENV K+WL EL+ +A + ++L+G K+DL
Sbjct: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQHYA-PGVPIVLVGTKLDLR 125
Query: 136 --KH--LRSVSLEDATSFAEREGL-------SFVETSALDATNVDKAFQTVLTEIYR 181
KH L SL T+ A+ E L ++E S+ NV F + + +
Sbjct: 126 EDKHYLLDHPSLVPVTT-AQGEELRKHIGATCYIECSSKTQQNVKAVFDAAIKVVIK 181
>AK111978
Length = 225
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 19 FKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQE 78
FK++L+GD G GK+ + R F +T+GV+ ++ WDTAGQE
Sbjct: 23 FKLILVGDGGTGKTTFVKRHLTGEFEKRYIATVGVDVHPLHFHTNCGMICFNCWDTAGQE 82
Query: 79 RYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHL 138
++ + YY A++++DVT T+ +V W +++ D I ++L+GNK+D
Sbjct: 83 KFGGLRDGYYIQGQCAIIMFDVTSRNTYRSVPNWYRDIVRVCDV-IPMVLVGNKVDAPD- 140
Query: 139 RSVSLEDATSFAEREGLSFVETSALDATNVDKAF 172
R+V + +F ++ L + + SA N +K F
Sbjct: 141 RAVKAK-MITFHRKKTLQYYDISAKTNYNFEKPF 173
>Os02g0742200 Small GTP-binding protein OsRac3
Length = 214
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N F D T+ F+ + V+ V +WDTAGQ
Sbjct: 8 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV-VDSTTVNLGLWDTAGQ 66
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA +L + + ++EN+ K+W+ EL+ +A + ++L+G K+DL+
Sbjct: 67 EDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYA-PGVPIVLVGTKLDLR 125
Query: 137 HLRSVSLEDATSFAEREGLSFVETS 161
ED + G+ V T+
Sbjct: 126 -------EDKHYLLDHPGMIPVTTA 143
>Os06g0687100 Ras GTPase family protein
Length = 98
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 13/101 (12%)
Query: 1 MARRPAPWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTI 60
M RP+ W VL+GD G GK++++ RF + + +STIG F ++ +
Sbjct: 1 MLSRPSWW-------------VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVL 47
Query: 61 QVEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 101
++ VK IWDTAGQERY ++ YYRGA A++VYD++
Sbjct: 48 IMDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAVVVYDIS 88
>Os02g0834000 Similar to Rop4 small GTP binding protein
Length = 195
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
K V +GD VGK+ +L +T N+F D T+ F+ + V+G V +WDTA
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTA-- 62
Query: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
E Y + YRGA LL + + ++ENV K+W+ ELR +A + ++L+G K+DL+
Sbjct: 63 EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYA-PGVPIILVGTKLDLR 121
Query: 137 HLRSVSLEDATSFAEREGLSFVETS 161
+D F + G + T+
Sbjct: 122 -------DDKQFFVDHPGAVPISTA 139
>D17779
Length = 103
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 8 WEQGGD---EYDYLFKIVLIGDSGVGK-SNLLSRFTRNSFSLDSKSTIGVEFATRTIQVE 63
W +G D +YDYLFK+VLIGDSG + L + + ++QV+
Sbjct: 19 WRRGTDAEDDYDYLFKVVLIGDSGDRQVQPXLPLHPQRVQPSIPSPPSASSSSPGSLQVD 78
Query: 64 GKIVKAQIWDTAGQERYRAITSAYY 88
GK VKAQIWDT Q RYRAITSAYY
Sbjct: 79 GKXVKAQIWDTVXQXRYRAITSAYY 103
>Os05g0105200 Similar to Ras-related protein Rab-1B
Length = 116
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 101 TKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVET 160
T +F NVK+WL E+ +A ++ +L+GNK DL + V E+A +FAE G+SF+ET
Sbjct: 1 TDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDSKVVDTEEAKAFAESLGISFLET 60
Query: 161 SALDATNVDKAFQTVLTEIYR 181
SA ++ NV++AF T+ ++I +
Sbjct: 61 SAKESINVEEAFLTMSSDIKK 81
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,001,982
Number of extensions: 199981
Number of successful extensions: 679
Number of sequences better than 1.0e-10: 60
Number of HSP's gapped: 643
Number of HSP's successfully gapped: 60
Length of query: 223
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 126
Effective length of database: 11,971,043
Effective search space: 1508351418
Effective search space used: 1508351418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)