BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0536900 Os05g0536900|AK105140
(206 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0536900 Similar to RAB7A 434 e-122
Os01g0714900 Similar to RAB7A 369 e-102
Os01g0227300 Similar to RAB7D 313 6e-86
Os05g0516600 Small GTP binding protein 310 5e-85
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 134 4e-32
Os05g0461300 Similar to RAB8C 133 8e-32
Os03g0819900 Similar to RAB8C 132 2e-31
AK062838 127 7e-30
Os08g0525000 Ras GTPase family protein 126 1e-29
Os10g0377400 Similar to Ras-related protein Rab11D 126 1e-29
Os03g0823700 Similar to Ras-related protein Rab11C 125 3e-29
Os01g0667600 Similar to GTP-binding protein 125 3e-29
Os05g0105100 Similar to Small GTPase rab11-related 124 5e-29
Os03g0843100 Ras GTPase family protein 124 5e-29
Os01g0179700 Similar to GTP-binding protein YPTM2 124 6e-29
Os02g0653800 Similar to GTP-binding protein 124 6e-29
Os12g0631100 Ras small GTPase, Ras type family protein 124 6e-29
Os01g0558600 Ras-related protein RIC1 123 7e-29
Os05g0280200 Similar to Ras-related protein Rab11A 122 2e-28
Os05g0564400 Similar to GTP-binding protein 122 2e-28
Os04g0470100 Similar to Small GTP binding protein Rab2 122 2e-28
Os05g0516800 Similar to Ras-related protein RIC2 122 2e-28
AK060246 122 2e-28
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 120 7e-28
Os01g0848700 Similar to Ras-related protein Rab11C 120 7e-28
Os09g0327100 Similar to GTP-binding protein 120 1e-27
Os01g0750000 Similar to Ras-related protein RIC2 119 2e-27
AK060839 119 2e-27
Os09g0527600 Similar to GTP-binding protein (Fragment) 118 4e-27
Os03g0151900 Similar to Small GTP-binding protein 117 7e-27
Os07g0496000 Similar to Nt-rab6 protein 117 8e-27
Os06g0551400 Ras-related protein RIC2 116 1e-26
AF327517 116 1e-26
Os03g0666500 Similar to Ras-related protein RHA1 114 4e-26
Os10g0441800 Similar to RAB5B 114 5e-26
Os05g0341600 Similar to Ras-related protein Rab-21 109 2e-24
Os06g0714600 Ras GTPase family protein 105 2e-23
Os07g0195100 Similar to Ras-related protein ARA-3 102 2e-22
Os01g0611100 Similar to GTP-binding nuclear protein Ran-2 100 8e-22
Os10g0208000 99 2e-21
Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (... 99 2e-21
Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (... 97 8e-21
Os10g0456600 Ras GTPase family protein 96 1e-20
Os03g0146000 Similar to RAB1X 95 4e-20
AK111978 94 9e-20
Os05g0513800 Small GTP-binding protein OsRac2 83 1e-16
Os01g0229400 Small GTP-binding protein OsRac1 83 1e-16
Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 ... 82 2e-16
Os02g0742200 Small GTP-binding protein OsRac3 82 4e-16
Os02g0120800 Similar to Small GTP-binding protein (Fragment) 80 1e-15
Os02g0312600 Similar to Small GTP-binding protein (Fragment) 80 1e-15
AK100585 79 2e-15
Os06g0687100 Ras GTPase family protein 75 3e-14
AK107227 71 5e-13
AK104720 70 9e-13
Os02g0834000 Similar to Rop4 small GTP binding protein 70 2e-12
AK110439 64 6e-11
>Os05g0536900 Similar to RAB7A
Length = 206
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL
Sbjct: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP 120
QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP 120
Query: 121 FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH 180
FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH
Sbjct: 121 FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH 180
Query: 181 EHDQDIYFKTVAQPAPDTEHTSGCAC 206
EHDQDIYFKTVAQPAPDTEHTSGCAC
Sbjct: 181 EHDQDIYFKTVAQPAPDTEHTSGCAC 206
>Os01g0714900 Similar to RAB7A
Length = 207
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/207 (84%), Positives = 186/207 (89%), Gaps = 1/207 (0%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
M++SRRRTLLKVIVLGDSGVGKTSLMNQYV+KKFSQQYKATIGADFVTKEVLIEDRLVTL
Sbjct: 1 MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP 120
QIWDTAGQERFQSLGVAFYRGADCC+LVYDVN+ RSF+ LNTWHDEFL QASPSDPK FP
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFP 120
Query: 121 FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH 180
FILLGNKID+D G R + EKKA EWC SKGNIPYFETSAK+D NVDSAFL +AKLALEH
Sbjct: 121 FILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALEH 180
Query: 181 EHDQDIYFKTVA-QPAPDTEHTSGCAC 206
E DQDIYF+TV P P+ E SGCAC
Sbjct: 181 ERDQDIYFQTVVPDPVPEAEQRSGCAC 207
>Os01g0227300 Similar to RAB7D
Length = 207
Score = 313 bits (802), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 172/206 (83%), Gaps = 2/206 (0%)
Query: 3 SSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQI 62
+SRRR LLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV I+DRL TLQI
Sbjct: 2 ASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQI 61
Query: 63 WDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFI 122
WDTAGQERFQSLGVAFYRGADCC+LVYDVN +SF LN+W +EFL QASPSDP++FPF+
Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFV 121
Query: 123 LLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEH 182
+LGNKID+D GN R + EKKAK WC SKGNIPYFETSAK+ +NV++AF CIA+ A+++E
Sbjct: 122 VLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEP 181
Query: 183 DQDIYFKTV--AQPAPDTEHTSGCAC 206
+++IY A + +SGC C
Sbjct: 182 EEEIYLPDTIDVGGAGRQQRSSGCEC 207
>Os05g0516600 Small GTP binding protein
Length = 206
Score = 310 bits (794), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%), Gaps = 16/211 (7%)
Query: 3 SSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQI 62
+SRRRTLLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV EDRL TLQI
Sbjct: 2 ASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQI 61
Query: 63 WDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFI 122
WDTAGQERFQSLGVAFYRGADCC+LVYDVN+ +SF+ LN W +EFL QASPSDP +FPF+
Sbjct: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV 121
Query: 123 LLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEH 182
LLGNK+D+D GN R + EKKAK WC SKGNIPYFETSAKD NV+ AF CI K AL++E
Sbjct: 122 LLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNEP 181
Query: 183 DQDIYFKTVAQPAPDT---------EHTSGC 204
++++Y PDT + +SGC
Sbjct: 182 EEELY-------VPDTVDVVGGNRAQRSSGC 205
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 12/199 (6%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ A+YRGA +LVYDV + SFN + W AS + K IL+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIA-----KLALEHEHD 183
D+D ++RA+P K + G I +FETSAK + NV+ F IA +LA
Sbjct: 131 DMDE-SKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKT 188
Query: 184 QDIYFKTVAQPAPDTEHTS 202
+D K + +P D E T+
Sbjct: 189 EDRTIK-INKPEGDAEATT 206
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 13/205 (6%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + + ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ A+YRGA +LVYDV + SFN + W AS + K IL+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH-------E 181
D+D ++RA+P K + G I +FETSAK + NV+ F IA+ +
Sbjct: 131 DMDE-SKRAVPTAKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKP 188
Query: 182 HDQDIYFKTVAQPAPDTEHTSGCAC 206
D+ I D SG AC
Sbjct: 189 EDKTIKINNKTDQGADKPAASGSAC 213
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + V ++ + + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ A+YRGA +LVYDV + SFN + W AS + K IL+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
D+D ++RA+P K + G I +FETSAK + NV+ F IA+
Sbjct: 131 DMDE-SKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEQVFFSIAR 175
>AK062838
Length = 201
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 107/166 (64%), Gaps = 7/166 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ ++YRGA ++VYDV + SFN + W E A + K +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNK----LLVGNKS 123
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIA 174
D+ A +R + AKE+ S G I + ETSAK+ NV++AF+ +A
Sbjct: 124 DLTA--KRVVSTDAAKEFAESLG-IEFLETSAKNAANVETAFMMMA 166
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 106/167 (63%), Gaps = 7/167 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDS VGK++L+++Y +F+ KATIG +F T+ + I + V QIWDTAGQ
Sbjct: 13 LFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQ 72
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ A+YRGA +LVYD++ + +F+ + W E T + + K +L+GNK
Sbjct: 73 ERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAK----MLVGNKC 128
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
D+D N R +P ++ K ++G + + ETSA D NV +AF + K
Sbjct: 129 DLD--NIREVPVEEGKALAEAEG-LFFMETSALDSTNVRTAFEIVIK 172
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
+ KV+++GDS VGK+ ++ ++ +FS KATIG +F T+ +LI+ + V QIWDTAGQ
Sbjct: 10 VFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTAGQ 69
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYD+ ++SF+ + W +E A K+ +L+GNK
Sbjct: 70 ERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHAD----KNIVIMLVGNKS 125
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
D++ + RA+ + AKE+ K N+ + ETSA NV++AF +
Sbjct: 126 DLE--DERAVSTEDAKEFA-EKENLFFLETSALQATNVENAFQTV 167
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 115/194 (59%), Gaps = 7/194 (3%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ + IE + + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDTAGQ 71
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYD+ K++F + W E A + +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADS----NIVIMMVGNKS 127
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHDQDIYF 188
D++ + R++PE+ + +G + + ETSA + NV+ AF I K + + +
Sbjct: 128 DLN--HLRSVPEEDGQALAEKEG-LSFLETSALEALNVEKAFQTILKDIHQIISKKALAA 184
Query: 189 KTVAQPAPDTEHTS 202
+ A P T+ T+
Sbjct: 185 QEAAGSGPPTQGTT 198
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + ++TIG +F TK V ++DRLV QIWDTAGQ
Sbjct: 19 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQ 78
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA ++VYDV + +F W E + +L+GNK
Sbjct: 79 ERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDA----NIVVMLVGNKA 134
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + RA+P + A+ + + G ETSA + NV+ AF
Sbjct: 135 DLR--HLRAVPAEDARAFAEAHGTFS-METSALEATNVEGAF 173
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 110/178 (61%), Gaps = 12/178 (6%)
Query: 1 MASSRRRT-----LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIED 55
MA +RR L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + +E
Sbjct: 1 MAGTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEG 60
Query: 56 RLVTLQIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSD 115
+++ QIWDTAGQER++++ A+YRGA +LVYDV+ +F+ ++ W E A
Sbjct: 61 KIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADA-- 118
Query: 116 PKHFPFILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
+ +L+GNK D+ + RA+ A ++ ++G + Y ETSA + NV+ AF I
Sbjct: 119 --NIRIMLVGNKTDLK--HLRAVATDDAHKFAEAEG-LSYIETSALEATNVEEAFQLI 171
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK++L++++ FS K+TIG +F T+ + +E ++V QIWDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYDV +F + W E A + +L+GNKI
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADS----NIVVMLIGNKI 133
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
D+ + R++ + A + +G + + ETSA D NVD AF +
Sbjct: 134 DLK--HLRSVSLEDATSFAEREG-LSFVETSALDATNVDKAFQTV 175
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 104/166 (62%), Gaps = 7/166 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V + + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ ++YRGA ++VYDV + SFN + W +E AS + K +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNK----LLVGNKS 123
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIA 174
D+ A + + + AK + G IP+ ETSAK+ NV+ AF+ +A
Sbjct: 124 DLTAN--KVVSSETAKAFADEMG-IPFMETSAKNATNVEQAFMAMA 166
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 104/166 (62%), Gaps = 7/166 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V + + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ ++YRGA ++VYDV + SFN + W +E AS + K +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNK----LLVGNKS 123
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIA 174
D+ A + + + AK + G IP+ ETSAK+ NV+ AF+ +A
Sbjct: 124 DLTAN--KVVSSETAKAFADEMG-IPFMETSAKNATNVEQAFMAMA 166
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 7/196 (3%)
Query: 11 KVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQER 70
K+++LGD G GK+SL+ ++V +F + ++TIGA F ++ + + D V +IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKIDI 130
+ SL +YRGA ++VYD+ SF W E Q +P+ L GNK D+
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNT----IMALAGNKADM 128
Query: 131 DAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHDQDIYFKT 190
R +P ++AK + G + + ETSAK NV+ F IAK L+ + QD
Sbjct: 129 VEA--RQVPAEEAKTYAQENG-LFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGM 185
Query: 191 VAQPAPDTEHTSGCAC 206
V P S +C
Sbjct: 186 VLNQRPAERMVSSSSC 201
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 16/189 (8%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V + + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ ++YRGA ++VYDV + SFN + W +E AS + K +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNK----LLVGNKC 123
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHDQDIYF 188
D+ A NR + +A + + IP+ ETSAKD NV+ AF+ +A +I
Sbjct: 124 DL-AENR--VVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAG---------EIKN 171
Query: 189 KTVAQPAPD 197
+ +QPA +
Sbjct: 172 RMASQPATN 180
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+++++++ FS K+TIG +F TK + +E + + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYD+ ++SF+ ++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
D+ + RA+ E + K +G + + ETSA + NV+ AF I
Sbjct: 128 DLI--HLRAVSEDEGKALAEKEG-LFFLETSAMEAVNVEEAFQTI 169
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++D++V QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA ++VYDV +F + W E + +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDA----NIVIMLVGNKA 127
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + RA+ + AK + K N + ETSA + NV++AF
Sbjct: 128 DLR--HLRAVSTEDAKAFA-EKENTFFMETSALESMNVENAF 166
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 101/166 (60%), Gaps = 7/166 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K I++GD+GVGK+ L+ Q+ +K+F + TIG +F + + ++ R V LQIWDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQ 65
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
E F+S+ ++YRGA +LVYD+ + +FN L +W L A + +L+GNK
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHLASW----LEDARQHANANMTIMLVGNKS 121
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIA 174
D+ +RRA+ ++ +++ G I + E SAK NV+ AF+ A
Sbjct: 122 DLS--HRRAVSYEEGEQFAKEHGLI-FMEASAKTAQNVEEAFVKTA 164
>Os05g0516800 Similar to Ras-related protein RIC2
Length = 220
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++ +++ QIWDTAGQ
Sbjct: 17 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYDV + +F+ + W E PS +L+GNK
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPS----IVCMLIGNKS 132
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + A+ + KE+ ++ ++ + ETSA D NVD+AF
Sbjct: 133 DLR--HLVAVSTEDGKEFAEAE-SMYFMETSALDATNVDNAF 171
>AK060246
Length = 220
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++ +++ QIWDTAGQ
Sbjct: 17 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYDV + +F+ + W E PS +L+GNK
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRAAFDNVGRWLRELRDHTDPS----IVCMLIGNKS 132
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + A+ + KE+ ++ ++ + ETSA D NVD+AF
Sbjct: 133 DLR--HLVAVSTEDGKEFAEAE-SMYFMETSALDATNVDNAF 171
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 105/167 (62%), Gaps = 7/167 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K+++LGDS VGK++L+ ++ +F K+TIG +F T++++I+ + + QIWDTAGQ
Sbjct: 14 LFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQ 73
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ A+YRGA +LVYD++ +++F+++ W +E T + + IL+GNK
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHS----DMNVVTILVGNKT 129
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
D+ + R + + K S+G + + ETSA D NV AF + K
Sbjct: 130 DLK--HAREVSTAEGKALAESQG-LFFMETSALDSSNVAEAFQTVVK 173
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ + IE + + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LV+D+ +++F+ + W E A + +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADA----NIVVMMVGNKS 127
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
D++ + R++PE+ + +G + + ETSA + NV+ AF +
Sbjct: 128 DLN--HLRSVPEEDGHAFSEKEG-LSFLETSALEAINVEKAFHTV 169
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++D++V QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 71
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA ++VYDV +F + W E + +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDA----NIVIMLVGNKA 127
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + RA+ + AK + + + + ETSA + NV+SAF
Sbjct: 128 DLR--HLRAVSVEDAKGFA-ERESTFFMETSALESMNVESAF 166
>Os01g0750000 Similar to Ras-related protein RIC2
Length = 221
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K +++GDSGVGK++L++++ +F + K+TIG +F T+ + ++ ++V QIWDTAGQ
Sbjct: 18 LFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQ 77
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYDV + +F+ + W E PS +L+GNK
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPS----IVVMLVGNKS 133
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + A+ + KE+ ++ ++ + ETSA D NV++AF
Sbjct: 134 DLR--HLVAVSTEDGKEYAEAE-SLYFMETSALDATNVENAF 172
>AK060839
Length = 209
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 98/165 (59%), Gaps = 7/165 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L K++++GDS VGK+ + ++ + + Y +TIG DF + + ++ + + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQIWDTAGQ 67
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ERF+++ ++YRGA ++VYD+ SFN + W E A+ S K +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDITDMESFNNVKEWMSEIDKYANDSVCK----LLVGNKC 123
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
D+ R + A+ + G IP+ ETSAKD NV+ AFL +
Sbjct: 124 DL--AESRVVETAVAQAYADEIG-IPFLETSAKDSINVEEAFLAM 165
>Os09g0527600 Similar to GTP-binding protein (Fragment)
Length = 239
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
+ KV+V+GDS VGKT L+ ++ +F K+TIG +F T+ + + + V QIWDTAGQ
Sbjct: 22 VFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQ 81
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA M+VYD+ +R+F + W +E A S L+GNK
Sbjct: 82 ERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGST----VVALIGNKA 137
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCI 173
D+ AG RR + +A + +G + + E SA NVD AFL +
Sbjct: 138 DMPAG-RREVAADEAARFAEEQG-LFFSEASALSGDNVDRAFLTL 180
>Os03g0151900 Similar to Small GTP-binding protein
Length = 199
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 11 KVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDR-LVTLQIWDTAGQE 69
K+++LGDSGVGK+ ++ ++V +F K T+GA F+++ + +ED +V +IWDTAGQE
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQE 92
Query: 70 RFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKID 129
R+ +L +YRGA ++VYD+ + SF+ W E SP +L+GNK D
Sbjct: 93 RYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSP----DIIMVLVGNKAD 148
Query: 130 IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
+ R + ++A+E+ K N+ + ETSAK N++ F IAK
Sbjct: 149 LH--ENRHVSSQEAQEYA-EKNNMVFIETSAKTADNINQVFEEIAK 191
>Os07g0496000 Similar to Nt-rab6 protein
Length = 208
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 11 KVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQER 70
K++ LGD VGKTS++ +++ KF Y+ATIG DF++K + +EDR V LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 71 FQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKIDI 130
F+SL ++ R + ++V+DV +++SF + W +E T+ +L+GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 131 DAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIA 174
+ +I E + K + + ETSAK +N+ + F IA
Sbjct: 127 VDKRQVSIEEGEGK---AKDLGVMFIETSAKAGFNIKALFRKIA 167
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++ ++V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYDV +F + W E P + +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + A+ + K + + ++ + ETSA + NV++AF
Sbjct: 130 DLR--HLVAVQTDEGKAFA-ERESLYFMETSALESTNVENAF 168
>AF327517
Length = 217
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + ++ ++V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA +LVYDV +F + W E P + +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
D+ + A+ + K + + ++ + ETSA + NV++AF
Sbjct: 130 DLR--HLVAVQTDEGKAFA-ERESLYFMETSALESTNVENAF 168
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 11 KVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQER 70
K+++LGD G GK+SL+ ++V +F + ++TIGA F ++ + + D V +IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKIDI 130
+ SL +YRGA ++VYD+ SF W E Q + S L GNK D+
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSST----VVALAGNKADL 128
Query: 131 DAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHDQDIYFKT 190
R + ++AK + G + + ETSAK NV+ F IAK L+ + Q+
Sbjct: 129 L--ETRQVQIEEAKTYAQENG-LFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQAGM 185
Query: 191 VAQPAPDTEHTSGCAC 206
V P+ S +C
Sbjct: 186 VLSQRPNERLVSSASC 201
>Os10g0441800 Similar to RAB5B
Length = 250
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRL-VTLQIWDTAGQ 68
+K+++LGDSGVGK+ ++ ++V +F K T+GA F+++ + +ED V +IWDTAGQ
Sbjct: 83 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQ 142
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER+ +L +YRGA ++VYD+ + SFN W E SP L+GNK
Sbjct: 143 ERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPD----MIMALVGNKA 198
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
D+ + R++ + A+E+ + + + ETSAK N++ F IAK
Sbjct: 199 DLH--DNRSVSSQDAQEYA-ERNTMFFIETSAKTADNINQLFEEIAK 242
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQE 69
K+++LGD VGKTSL+ +YVN FS + +AT+ A ++TK +++E +TL IWDTAGQE
Sbjct: 15 FKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQE 74
Query: 70 RFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKID 129
+F +LG +YR AD +LVYD+ +F + W E A+ K + NK D
Sbjct: 75 KFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMAN----KDIVMAIAANKSD 130
Query: 130 IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHD 183
+ + I +A + S G F TSAK +D F IAK LE +
Sbjct: 131 L--VRSKHIDTNEAASYAESIGAT-LFVTSAKAGTGIDDIFSDIAKRLLERRKN 181
>Os06g0714600 Ras GTPase family protein
Length = 225
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
+ KV+V+GDS VGKT L+ ++ +F K+TIG +F T+ V I + V QIWDTAGQ
Sbjct: 7 VFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQ 66
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKI 128
ER++++ A+YRGA MLVYDV ++RSF+ W + A S +L+GNK
Sbjct: 67 ERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNS----IVVMLIGNKA 122
Query: 129 DIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
D+ + + + E SA NV+ AFL + +
Sbjct: 123 DL---SHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLR 166
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 20 VGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFY 79
+GK+ L+ ++ + F+ + TIG DF + V ++ + V LQIWDTAGQERF+++ A+Y
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 80 RGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKIDIDAGNRRAIP 139
RGA +LVYDV + SFN + W AS + K IL+GNK+D+D +R +
Sbjct: 144 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKVDMDT--KRVVS 197
Query: 140 EKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
+ ++ G + +FETSAK + NV+ F IA+
Sbjct: 198 TAQGQKLADEYG-MKFFETSAKTNQNVEQVFFTIAR 232
>Os01g0611100 Similar to GTP-binding nuclear protein Ran-2
Length = 221
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 22/205 (10%)
Query: 1 MASSRRRTL----LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDR 56
MA ++T+ K++++GD G GKT+ + +++ +F ++Y+ TIG + +
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
Query: 57 LVTLQIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDP 116
+ WDTAGQE+F L +Y C ++++DV ++ ++ + TWH +
Sbjct: 61 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC----- 115
Query: 117 KHFPFILLGNKIDIDAGNRRAIPEKKAKEWCV-SKGNIPYFETSAKDDYNVDSAFLCIA- 174
++ P +L GNK+D+ NR+ KAK+ K N+ Y+E SAK +YN + FL +A
Sbjct: 116 ENIPIVLCGNKVDVK--NRQV----KAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLAR 169
Query: 175 KLALEHEHDQDIYF-KTVAQPAPDT 198
KLA D +++F +T A PD
Sbjct: 170 KLA----GDGNLHFVETPALAPPDV 190
>Os10g0208000
Length = 355
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 16/166 (9%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQE 69
K + +GD+GVGK+ L+ Q+ +K+F + T G ++ V ++ + LQIWDTAGQE
Sbjct: 9 FKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQE 68
Query: 70 RFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKID 129
F+ + ++YRG C+LVYD+ +W L A+ IL+GNK D
Sbjct: 69 AFRCITRSYYRGNAACLLVYDI---------TSW----LEDATQHASARMTIILIGNKCD 115
Query: 130 IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
+ +RR + ++ +++ G + + E SAK +NV+ AF+ A+
Sbjct: 116 L--SHRRVVSYQEGEQFAKEHG-LLFMEASAKTAHNVEKAFILAAR 158
>Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 221
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQE 69
K++++GD G GKT+ + +++ +F ++Y+ TIG + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQE 73
Query: 70 RFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKID 129
+F L +Y C ++++DV ++ ++ + TWH + ++ P +L GNK+D
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
Query: 130 IDAGNRRAIPEKKAKEWCV-SKGNIPYFETSAKDDYNVDSAFLCIAK 175
+ NR+ KAK+ K N+ Y+E SAK +YN + FL +A+
Sbjct: 129 VK--NRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
>Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 226
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 12/167 (7%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQE 69
K+I++GD G GKT+ + +++ +F ++Y+ TIG + + V WDTAGQE
Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQE 77
Query: 70 RFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKID 129
+F L +Y C ++++DV ++ ++ + TWH + + P +L GNK+D
Sbjct: 78 KFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVCD-----NIPIVLCGNKVD 132
Query: 130 IDAGNRRAIPEKKAKEWCV-SKGNIPYFETSAKDDYNVDSAFLCIAK 175
+ NR+ KAK K N+ Y+E SAK +YN + FL +A+
Sbjct: 133 MK--NRQV----KAKMVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 173
>Os10g0456600 Ras GTPase family protein
Length = 222
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKK----FSQQYKATIGADFVTKEVLIEDRLVTLQIWDT 65
K++++GDSGVGK+SL+ +V TIG DF K + I + + L IWDT
Sbjct: 20 FKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDT 79
Query: 66 AGQERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHFPFILL 124
AGQERF+++ ++YRGA +LVYDV + SF N W E + +S D +L+
Sbjct: 80 AGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIK---MLV 136
Query: 125 GNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALE 179
GNKID + + R + ++ + G + + E+SAK NV+ C +LAL+
Sbjct: 137 GNKIDKE--DERTVTREEGLAFAEESGCL-FLESSAKTRDNVEK---CFEELALK 185
>Os03g0146000 Similar to RAB1X
Length = 210
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVN-KKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
K++++GDS VGK+SL+ +V+ + TIG DF K + + + + L IWDTAGQ
Sbjct: 13 FKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQ 72
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHFPFILLGNK 127
ERF+ + ++YRGA +LVYDV + SF N + W E S K +L+GNK
Sbjct: 73 ERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELH---STNKECIKMLVGNK 129
Query: 128 IDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALE-----HEH 182
+D + R + ++ + G + + E+SAK NV+ F +A LE E
Sbjct: 130 VDKN--EERMVTREEGLAFAQESGCL-FLESSAKTRENVEKCFEELALKILEVPSLLEEG 186
Query: 183 DQDIYFKTVAQPAPDTEHTSGC 204
+ ++ Q + GC
Sbjct: 187 SSVVKRNSLKQKHENKAKNGGC 208
>AK111978
Length = 225
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQE 69
K+I++GD G GKT+ + +++ +F ++Y AT+G D ++ WDTAGQE
Sbjct: 23 FKLILVGDGGTGKTTFVKRHLTGEFEKRYIATVGVDVHPLHFHTNCGMICFNCWDTAGQE 82
Query: 70 RFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKID 129
+F L +Y C ++++DV ++ ++ ++ W+ + + P +L+GNK+D
Sbjct: 83 KFGGLRDGYYIQGQCAIIMFDVTSRNTYRSVPNWYRDIVRVCDV-----IPMVLVGNKVD 137
Query: 130 IDAGNRRAIPEKKAKEWCVS---KGNIPYFETSAKDDYNVDSAFLCIAK 175
P++ K ++ K + Y++ SAK +YN + FL +AK
Sbjct: 138 --------APDRAVKAKMITFHRKKTLQYYDISAKTNYNFEKPFLWLAK 178
>Os05g0513800 Small GTP-binding protein OsRac2
Length = 214
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
+K + +GD VGKT ++ Y + KF Y T+ +F + V ++ +V L +WDTAGQ
Sbjct: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVSVDGNIVNLGLWDTAGQ 65
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHFPFILLGNK 127
E + L YRGAD +L + + ++ S+ N L W E L + +P + P +L+G K
Sbjct: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
Query: 128 IDI--------DAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALE 179
+D+ D AI + +E G Y E S+K N+ + F K+ L+
Sbjct: 121 LDLRDHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVFDTAIKVVLQ 180
Query: 180 HEHDQDIYFKTVAQPAPDTEHTSGCA 205
+ T+A+ T ++GC+
Sbjct: 181 PPRRRG--ETTMAR--KKTRRSTGCS 202
>Os01g0229400 Small GTP-binding protein OsRac1
Length = 214
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
+K + +GD VGKT ++ Y KF Y T+ +F + V ++ +V L +WDTAGQ
Sbjct: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
Query: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHFPFILLGNK 127
E + L YRGAD +L + + ++ S+ N W E L + +P P +L+G K
Sbjct: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPE-LRRFAPG----VPVVLVGTK 123
Query: 128 IDI--------DAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALE 179
+D+ D I ++ +E G + Y E S+K N+ + F K+ L+
Sbjct: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
Query: 180 HEHDQDIYFKTVAQPA--PDTEHTSGCAC 206
+D+ K + + P + G AC
Sbjct: 184 PPRHKDVTRKKLQSSSNRPVRRYFCGSAC 212
>Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 (GTPase protein
ROP10)
Length = 215
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 16/188 (8%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
MASS R +K + +GD VGKT ++ Y + KF Y T+ +F + V+++ V L
Sbjct: 1 MASSASR-FIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNF-SANVVVDGTTVNL 58
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHF 119
+WDTAGQE + L YRGAD +L + + ++ S+ N + W E L +P
Sbjct: 59 GLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPE-LQHYAPG----V 113
Query: 120 PFILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFL 171
P +L+G K+D +D + + + +E G Y E S+K NV + F
Sbjct: 114 PIVLVGTKLDLREDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVFD 173
Query: 172 CIAKLALE 179
K+ ++
Sbjct: 174 AAIKVVIK 181
>Os02g0742200 Small GTP-binding protein OsRac3
Length = 214
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 16/193 (8%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
MASS R +K + +GD VGKT ++ Y + KF Y T+ +F + V+++ V L
Sbjct: 1 MASSASR-FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVVDSTTVNL 58
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHF 119
+WDTAGQE + L YRGAD +L + + ++ S+ N + W E L +P
Sbjct: 59 GLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPE-LQHYAPG----V 113
Query: 120 PFILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFL 171
P +L+G K+D +D + + +E G Y E S+K NV F
Sbjct: 114 PIVLVGTKLDLREDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFD 173
Query: 172 CIAKLALEHEHDQ 184
K+ ++ Q
Sbjct: 174 AAIKVVIQPPTKQ 186
>Os02g0120800 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
M++SR +K + +GD VGKT ++ Y + F Y T+ +F + V+++ V L
Sbjct: 1 MSASR---FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNL 56
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHF 119
+WDTAGQE + L YRGAD +L + + +K S+ N W E L +P
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPE-LKHYAPG----V 111
Query: 120 PFILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFL 171
P IL+G K+D +D I + +E G Y E S+K NV F
Sbjct: 112 PIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFD 171
Query: 172 CIAKLAL 178
K+ L
Sbjct: 172 AAIKVVL 178
>Os02g0312600 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
M+++R +K + +GD VGKT ++ Y + F Y T+ +F + V+++ V L
Sbjct: 1 MSTAR---FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNL 56
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP 120
+WDTAGQE + L YRGAD +L + + +K S+ + H +++ + P + P
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENI---HKKWIPELRHYAP-NVP 112
Query: 121 FILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLC 172
+L+G K+D +D I + +E G Y E S+K NV S F
Sbjct: 113 IVLVGTKLDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDS 172
Query: 173 IAKLAL 178
K+ L
Sbjct: 173 AIKVVL 178
>AK100585
Length = 197
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
M++SR +K + +GD VGKT ++ Y + F Y T+ +F + V+++ V L
Sbjct: 1 MSASR---FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNL 56
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHF 119
+WDTAGQE + L YRGAD +L + + +K S+ N W E L +P
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPE-LKHYAPG----V 111
Query: 120 PFILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFL 171
P IL+G K+D +D I + +E G Y E S+K NV F
Sbjct: 112 PIILVGTKLDLRDDKQFFVDHPGVVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFD 171
Query: 172 CIAKLAL 178
K+ L
Sbjct: 172 AAIKVVL 178
>Os06g0687100 Ras GTPase family protein
Length = 98
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 13 IVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQ 72
++LGD G GKTS++ ++ + ++TIGA F ++ +++++ V L IWDTAGQER+
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYH 68
Query: 73 SLGVAFYRGADCCMLVYDVNA 93
SL +YRGA ++VYD+++
Sbjct: 69 SLAPMYYRGAAAAVVVYDISS 89
>AK107227
Length = 227
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 22 KTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRG 81
K++L Q+V F Y TI D K ++I+ + ++I DTAG E+F +L + +
Sbjct: 16 KSALTVQFVRNVFVSTYDPTI-EDTYRKMLVIDGQQCMVEILDTAGTEQFLALKELYIKS 74
Query: 82 ADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKIDIDAGNRRAIPEK 141
+LV+ + + S N L + + D P +L+GNK D+ A R +P +
Sbjct: 75 GQGFILVFSLTSLASVNELGPLREAIV---RIKDTTAIPLVLVGNKSDLRAD--RQVPRE 129
Query: 142 KAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAK 175
+ GN+P++E SA+ NVD F + +
Sbjct: 130 VGTSLSKAWGNVPFYEASARKRINVDEIFADVVR 163
>AK104720
Length = 164
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 58 VTLQIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNAL-NTWHDEFLTQASPSDP 116
+ L IWDTAGQERF++L ++YRGA ++VYDV + +F L + W E ++ D
Sbjct: 16 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 75
Query: 117 KHFPFILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAF 170
+L+GNK+D ++ RA+ +K+ E+ G + + E SAK NV+ F
Sbjct: 76 IK---MLVGNKVDKES--ERAVTKKEGIEFAREYGCL-FLECSAKTKVNVEQCF 123
>Os02g0834000 Similar to Rop4 small GTP binding protein
Length = 195
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
M++SR +K + +GD VGKT ++ Y + F Y T+ +F + V+++ V L
Sbjct: 1 MSASR---FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNL 56
Query: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHF 119
+WDTA E + L YRGAD +L + + +K S+ N W E L +P
Sbjct: 57 GLWDTA--EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPE-LRHYAPG----V 109
Query: 120 PFILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFL 171
P IL+G K+D +D I + +E G Y E S+K N+ + F
Sbjct: 110 PIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFD 169
Query: 172 CIAKLAL 178
K+ L
Sbjct: 170 AAIKVVL 176
>AK110439
Length = 508
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 22 KTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRG 81
K+++ Q++ F + Y TI D K I+ + + I DTAGQE + ++ + G
Sbjct: 329 KSAITIQFIQGLFVEDYDPTI-EDSYRKTCTIDGLVTVIDILDTAGQEEYAAMRDTYIAG 387
Query: 82 ADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILLGNKIDIDAGNRRAIPE- 140
+ +L Y +N+ S+ +++ + L D FP +L+ NK D++ +R +PE
Sbjct: 388 GESFLLTYAINSLHSYEETASFYKQILRI---KDCDSFPIVLVANKCDLE--KQRQVPEE 442
Query: 141 ---KKAKEWCVSKGNIPYFETSAKDDYNVDSAFL 171
++AK+W V +FETSA N++ F
Sbjct: 443 QARQQAKQWKVQ-----FFETSAYMKINIEEIFF 471
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,738,890
Number of extensions: 263014
Number of successful extensions: 1004
Number of sequences better than 1.0e-10: 57
Number of HSP's gapped: 950
Number of HSP's successfully gapped: 57
Length of query: 206
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 110
Effective length of database: 12,023,257
Effective search space: 1322558270
Effective search space used: 1322558270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)