BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0450400 Os04g0450400|AK121979
(415 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0450400 Zinc finger, RING-type domain containing protein 381 e-106
Os02g0572350 Zinc finger, RING-type domain containing protein 130 1e-30
AK109940 129 3e-30
AK064102 127 1e-29
Os11g0610600 Similar to RING-H2 finger protein ATL2N 104 1e-22
Os02g0692000 Similar to RING finger family protein 96 5e-20
Os04g0590900 Similar to RING-H2 finger protein ATL1B 93 3e-19
Os01g0212700 Zinc finger, RING-type domain containing protein 87 2e-17
Os06g0695900 Zinc finger, RING-type domain containing protein 82 1e-15
Os08g0445000 Similar to RING-H2 finger protein ATL5A 80 3e-15
Os01g0822800 Similar to RING-H2 finger protein ATL3C 80 3e-15
Os02g0820200 Zinc finger, RING-type domain containing protein 79 5e-15
Os12g0432600 Zinc finger, RING-type domain containing protein 78 1e-14
Os06g0187300 77 2e-14
Os03g0391100 77 2e-14
Os03g0149700 Zinc finger, RING-type domain containing protein 77 3e-14
Os12g0596200 Similar to RING-H2 protein 77 3e-14
Os03g0340100 77 3e-14
Os01g0830900 77 3e-14
Os12g0115600 77 3e-14
Os05g0478000 Zinc finger, RING-type domain containing protein 76 5e-14
Os02g0832150 Zinc finger, RING-type domain containing protein 76 5e-14
Os01g0311100 76 5e-14
Os05g0360300 76 6e-14
Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-... 75 7e-14
Os09g0468300 Zinc finger, RING-type domain containing protein 75 1e-13
Os08g0563500 75 1e-13
Os02g0743100 Zinc finger, RING-type domain containing protein 75 1e-13
Os11g0703300 74 2e-13
Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-... 74 2e-13
Os08g0484200 Zinc finger, RING-type domain containing protein 74 2e-13
Os02g0759400 Zinc finger, RING-type domain containing protein 74 2e-13
Os01g0736600 Zinc finger, RING-type domain containing protein 74 2e-13
Os06g0537500 74 3e-13
Os12g0433100 Zinc finger, RING-type domain containing protein 73 3e-13
Os10g0574400 Similar to RING finger family protein 73 4e-13
Os02g0248900 73 4e-13
Os11g0703200 73 5e-13
Os01g0213400 Zinc finger, RING-type domain containing protein 73 5e-13
Os09g0376700 Zinc finger, RING-type domain containing protein 72 5e-13
Os02g0561400 72 7e-13
Os02g0561000 72 7e-13
Os02g0560600 72 7e-13
Os02g0560200 72 7e-13
Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-) 72 8e-13
Os04g0419500 Zinc finger, RING-type domain containing protein 72 9e-13
Os06g0233200 Similar to RING-H2 finger protein ATL1R (RING-... 72 9e-13
Os02g0686100 Similar to RING-H2 finger protein ATL1B 72 1e-12
Os06g0537300 72 1e-12
Os03g0149800 Similar to RING-H2 finger protein ATL1D 71 1e-12
Os06g0717600 Zinc finger, RING-type domain containing protein 71 1e-12
Os06g0539800 71 2e-12
Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1... 71 2e-12
Os01g0311400 Zinc finger, RING-type domain containing protein 71 2e-12
Os02g0572300 71 2e-12
Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1... 70 2e-12
Os02g0249200 70 2e-12
Os05g0164200 Zinc finger, RING-type domain containing protein 70 2e-12
Os05g0359500 Similar to RING-H2 finger protein ATL5C precursor 70 2e-12
Os03g0398600 Zinc finger, RING-type domain containing protein 70 3e-12
Os10g0544600 Fibrillarin family protein 70 3e-12
Os06g0666500 Zinc finger, RING-type domain containing protein 70 3e-12
Os06g0540400 Zinc finger, RING-type domain containing protein 70 3e-12
Os06g0271600 Zinc finger, RING-type domain containing protein 70 3e-12
Os05g0360400 Zinc finger, RING-type domain containing protein 70 4e-12
Os06g0155200 70 4e-12
Os01g0213000 Zinc finger, RING-type domain containing protein 69 5e-12
Os02g0676500 Zinc finger, RING-type domain containing protein 69 8e-12
Os08g0550400 Similar to RING-H2 finger protein ATL5P 69 8e-12
Os06g0167200 Similar to RING-H2 finger protein ATL1R (RING-... 69 9e-12
Os02g0248280 69 9e-12
Os03g0188200 Zinc finger, RING-type domain containing protein 69 1e-11
Os04g0192250 68 1e-11
Os02g0249300 Zinc finger, RING-type domain containing protein 68 2e-11
Os01g0755700 Zinc finger, RING-type domain containing protein 68 2e-11
Os02g0249101 67 2e-11
Os07g0146300 66 4e-11
Os12g0620100 66 5e-11
Os06g0536600 66 5e-11
Os03g0788100 Similar to RING-H2 finger protein ATL1P (RING-... 66 6e-11
Os06g0534900 Zinc finger, RING-type domain containing protein 65 8e-11
Os02g0557300 Similar to RING-H2 finger protein ATL1G 65 8e-11
Os02g0247900 65 8e-11
Os05g0526600 Zinc finger, RING-type domain containing protein 65 8e-11
Os01g0213100 65 9e-11
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/415 (55%), Positives = 232/415 (55%)
Query: 1 MPLHHRRALHSNDCDDGGYGCXXXXXXXXXXXVILTXXXXXXXXXXXXXXXXXXXXXXXL 60
MPLHHRRALHSNDCDDGGYGC VILT L
Sbjct: 1 MPLHHRRALHSNDCDDGGYGCSSWPLSPPPPSVILTPFASPSPAPWACPPAFPAPSPSPL 60
Query: 61 HGAAGGRRDQXXXXXXXXXXXXDADEHRRRIINLIVVGAAALAFLSMXXXXXXXXXXXXX 120
HGAAGGRRDQ DADEHRRRIINLIVVGAAALAFLSM
Sbjct: 61 HGAAGGRRDQGGYHGSPPGGGGDADEHRRRIINLIVVGAAALAFLSMILLVVIVAVRRRR 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHIWYIRTVGLDEA 180
HHIWYIRTVGLDEA
Sbjct: 121 LRRRRQRQQALLAPAAPADAVAVNVEDGGDDDAEGGGGGGGGGGVVHHIWYIRTVGLDEA 180
Query: 181 AIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNC 240
AIDSI DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNC
Sbjct: 181 AIDSIAATRYRAGAGLLGAADCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNC 240
Query: 241 PLCRSDVLGPAATATESGGGDTGSMPQADPVANTIXXXXXXXXPGDAILXXXXXXXXXXX 300
PLCRSDVLGPAATATESGGGDTGSMPQADPVANTI PGDAIL
Sbjct: 241 PLCRSDVLGPAATATESGGGDTGSMPQADPVANTIAAAQQAAAPGDAILERQEEEEEAEQ 300
Query: 301 XXXGAPPHMEENRQEQSSSPDPLPPPRNVRRAASMDXXXXXXXXXXXXXXXXXXXXXXXX 360
GAPPHMEENRQEQSSSPDPLPPPRNVRRAASMD
Sbjct: 301 EDQGAPPHMEENRQEQSSSPDPLPPPRNVRRAASMDAAIVSTAAEVAALERLPEAAPEEE 360
Query: 361 XXXXXXXXXXXXXXXXXSCLKVSSSGRLSNLGAAERLPRSFFSRHCRARSSVLPL 415
SCLKVSSSGRLSNLGAAERLPRSFFSRHCRARSSVLPL
Sbjct: 361 QSGGGGGGDKRGGAPGASCLKVSSSGRLSNLGAAERLPRSFFSRHCRARSSVLPL 415
>Os02g0572350 Zinc finger, RING-type domain containing protein
Length = 325
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 64/84 (76%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFH 226
HH W+IRTVGLDEAAI+SI DC VCLGEF+DGEL+RLLPKCGHAFH
Sbjct: 74 HHAWHIRTVGLDEAAIESIALARYRAGAGMLGATDCPVCLGEFRDGELLRLLPKCGHAFH 133
Query: 227 VPCIDTWLRAHVNCPLCRSDVLGP 250
VPCID WLRAHVNCPLCR+ VL P
Sbjct: 134 VPCIDAWLRAHVNCPLCRAHVLHP 157
>AK109940
Length = 373
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 64/84 (76%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFH 226
HH W+IRTVGLDEAAI+SI DC VCLGEF+DGEL+RLLPKCGHAFH
Sbjct: 122 HHAWHIRTVGLDEAAIESIALARYRAGAGMLGATDCPVCLGEFRDGELLRLLPKCGHAFH 181
Query: 227 VPCIDTWLRAHVNCPLCRSDVLGP 250
VPCID WLRAHVNCPLCR+ VL P
Sbjct: 182 VPCIDAWLRAHVNCPLCRAHVLHP 205
>AK064102
Length = 357
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 71/100 (71%), Gaps = 8/100 (8%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFH 226
HH+WYIRTVGLDEA I SI DC+VCLGEF+DGELVRLLP+C H FH
Sbjct: 124 HHVWYIRTVGLDEATITSIATAEYRAGVGWGG--DCAVCLGEFRDGELVRLLPRCSHPFH 181
Query: 227 VPCIDTWLRAHVNCPLCRSDVLGPA---ATATE---SGGG 260
PCIDTWLRAHVNCPLCRS V+ P+ ATATE GGG
Sbjct: 182 APCIDTWLRAHVNCPLCRSPVVVPSDLPATATEGEAEGGG 221
>Os11g0610600 Similar to RING-H2 finger protein ATL2N
Length = 405
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 57/92 (61%), Gaps = 11/92 (11%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXXX-----------DCSVCLGEFQDGELV 215
HH+WYIRTVGLDE AI +I C+VCL EF+DGE +
Sbjct: 176 HHVWYIRTVGLDERAIAAITALVYDAKKTGGGIGLAGGGGGGGGGSCAVCLTEFRDGETL 235
Query: 216 RLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
RLLP+C HAFH CIDTWLRAHVNCPLCR+ V
Sbjct: 236 RLLPRCRHAFHRGCIDTWLRAHVNCPLCRAPV 267
>Os02g0692000 Similar to RING finger family protein
Length = 389
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 50/72 (69%)
Query: 176 GLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLR 235
G+DE I+ I DCSVCLGEF++GE +RLLPKC HAFHVPCIDTWL+
Sbjct: 138 GMDETLINKITVCKYRRGDGFVDSTDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLK 197
Query: 236 AHVNCPLCRSDV 247
+H NCPLCR ++
Sbjct: 198 SHSNCPLCRCNI 209
>Os04g0590900 Similar to RING-H2 finger protein ATL1B
Length = 383
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 167 HHIWYIRT-VGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAF 225
H W + GLDE I+ I DCSVCLGEF DGE +RLLP+C HAF
Sbjct: 121 HESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAF 180
Query: 226 HVPCIDTWLRAHVNCPLCRSDV 247
H CIDTWL++H NCPLCR+++
Sbjct: 181 HQQCIDTWLKSHSNCPLCRANI 202
>Os01g0212700 Zinc finger, RING-type domain containing protein
Length = 185
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 176 GLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLR 235
G+ AAI ++ DC+VCLG+ GE VR LPKCGH FH C+D WLR
Sbjct: 73 GMSAAAIAALPTFGYEASAAAAAALDCAVCLGQVDAGEKVRQLPKCGHLFHAECVDAWLR 132
Query: 236 AHVNCPLCRSDVLGPAATA----TESGGGDT 262
AH CP+CR+ V GPA A SGGG T
Sbjct: 133 AHSTCPMCRAAVEGPATAAIAKKASSGGGAT 163
>Os06g0695900 Zinc finger, RING-type domain containing protein
Length = 398
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%)
Query: 173 RTVGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDT 232
R G+D A ++S+ +C+VCLG F+ E +RLLPKC H FHV C+DT
Sbjct: 88 RNSGVDRAVVESLPVFRFGALRGQKAGLECAVCLGRFEPTEALRLLPKCRHGFHVECVDT 147
Query: 233 WLRAHVNCPLCRSDV 247
WL AH CPLCRS V
Sbjct: 148 WLDAHSTCPLCRSRV 162
>Os08g0445000 Similar to RING-H2 finger protein ATL5A
Length = 501
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 167 HHIWYIRTVGLDEAAIDS--IXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHA 224
++++ G+D++ ID+ + DC+VCL EF D + +RLLPKC HA
Sbjct: 116 QQLFHLHDAGVDQSFIDTLPVFLYGAVVGAGRKDPFDCAVCLCEFADDDRLRLLPKCSHA 175
Query: 225 FHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
FHV CIDTWL +H CPLCR +L A + GGG
Sbjct: 176 FHVDCIDTWLLSHSTCPLCRRSLL---ADFSPYGGG 208
>Os01g0822800 Similar to RING-H2 finger protein ATL3C
Length = 208
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAAT 253
C++CLGEF DGE VR+LP+CGH FHV C+DTWL +H +CP CR VL A T
Sbjct: 124 CAICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHDSCPTCRGSVLHGATT 175
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 176 GLDEAAIDSI--XXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTW 233
GL+EAAI S+ +C+VC+ EFQ+ E VRLLP C H FHV CIDTW
Sbjct: 114 GLEEAAIQSLPAFRYRKAIKDTTADSSECAVCISEFQEEERVRLLPSCLHVFHVDCIDTW 173
Query: 234 LRAHVNCPLCRSDV 247
L+ + NCPLCR+ +
Sbjct: 174 LQGNANCPLCRAAI 187
>Os12g0432600 Zinc finger, RING-type domain containing protein
Length = 185
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 172 IRTVGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCID 231
+ GL + I++I C+VC+ +DG+ VR LP CGHAFH PC+D
Sbjct: 93 VEARGLSQEDIEAIPAFEYRRGSSGSGVAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVD 152
Query: 232 TWLRAHVNCPLCRSDVLGPAATAT 255
WLR H CP+CR+DV+ A T
Sbjct: 153 GWLRDHATCPMCRADVVKVAGETT 176
>Os06g0187300
Length = 444
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 167 HHIWYIRTVGLDEAAIDS----IXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCG 222
++++ G+D+ ID+ + DC+VCL EF + +RLLP CG
Sbjct: 84 QQLFHLHDAGVDQTFIDALPVFVYRAVVGAGLRKDDPFDCAVCLCEFAGDDKLRLLPTCG 143
Query: 223 HAFHVPCIDTWLRAHVNCPLCRSDVL 248
HAFHVPCID WL +H CP+CR VL
Sbjct: 144 HAFHVPCIDAWLLSHSTCPICRGSVL 169
>Os03g0391100
Length = 417
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 176 GLDEAAIDSIXXXXXXXXXXXXX---XXDCSVCLGEFQDG-ELVRLLPKCGHAFHVPCID 231
GLD AA++++ +C+VCL EF DG E +RLLP C H FH CID
Sbjct: 123 GLDVAAMEALPVLTYATARAVKAGRGALECAVCLAEFADGGEKLRLLPGCCHVFHAACID 182
Query: 232 TWLRAHVNCPLCRSDVLGPAATA 254
WL AHV CP+CR+D+ PA A
Sbjct: 183 VWLAAHVTCPVCRADLADPAVAA 205
>Os03g0149700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGP 250
+C+VCL EF + E VRLLP C HAFH+ CIDTWL+ + CP CRSDV P
Sbjct: 127 ECAVCLSEFVERERVRLLPNCSHAFHIDCIDTWLQGNARCPFCRSDVTLP 176
>Os12g0596200 Similar to RING-H2 protein
Length = 310
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATAT 255
DC+VCL EF DG+ +R LP C HAFH CID WLRAH +CPLCR+ V P A+
Sbjct: 103 DCAVCLLEFADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVALPPPVAS 157
>Os03g0340100
Length = 200
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
+C+VC+GE +DG+ RLLP+CGH FH C+D W R+H CPLCR+ V AA G G
Sbjct: 132 ECAVCIGELRDGDTGRLLPRCGHRFHAECVDKWFRSHATCPLCRAAV--AAADGDSGGEG 189
Query: 261 DT 262
DT
Sbjct: 190 DT 191
>Os01g0830900
Length = 189
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAAT 253
CS+CLGEF++GE V+ LP CGH FH C+D WLR+ +CPLCRS +L AAT
Sbjct: 126 QCSICLGEFEEGEKVKALPLCGHGFHPECVDAWLRSRPSCPLCRSSLLPAAAT 178
>Os12g0115600
Length = 170
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
+C++CLG+F DG+ VR+LP+C H FHV CIDTWL AH +CP CR +L A T GG
Sbjct: 112 ECAICLGDFADGDKVRVLPRCHHGFHVGCIDTWLAAHTSCPTCRDSILSVHAGVT---GG 168
Query: 261 DT 262
T
Sbjct: 169 QT 170
>Os05g0478000 Zinc finger, RING-type domain containing protein
Length = 189
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGGD 261
C++CLGEF DGE VR+LP+C H FHV C+D WL +H +CP CR V+G GGG
Sbjct: 124 CAICLGEFADGEKVRVLPRCRHGFHVRCVDAWLVSHGSCPTCRRQVIG--------GGGS 175
Query: 262 TGSMPQADPVANTI 275
T P +D +A +
Sbjct: 176 T-PPPDSDTIAVVV 188
>Os02g0832150 Zinc finger, RING-type domain containing protein
Length = 217
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 176 GLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLR 235
GL + AID++ +C++CL EF GE +RLLP CGHAFHV CIDTWL
Sbjct: 107 GLKKKAIDALPTVSFALKQQQQQA-ECAICLAEFAGGEELRLLPHCGHAFHVSCIDTWLG 165
Query: 236 AHVNCPLCRSDV 247
H CP CR+ V
Sbjct: 166 THATCPSCRATV 177
>Os01g0311100
Length = 249
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGP 250
DC+VCL EF+ G+ R LP+CGH FHV CID W R + CPLCR+DV P
Sbjct: 146 DCAVCLAEFEAGDKARALPRCGHRFHVECIDAWFRENSTCPLCRADVEAP 195
>Os05g0360300
Length = 199
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
+C+VC+ EF+DG+L RLLP+CGH FH C+ WLR H CPLCR+ L AA+ +
Sbjct: 124 ECAVCIVEFRDGDLARLLPRCGHRFHADCVGAWLRLHSTCPLCRAAALPLAASTATASVP 183
Query: 261 DTGSMPQADPVAN 273
+ P+ D A+
Sbjct: 184 NNNDDPKDDAAAH 196
>Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 321
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
+C+VCL E DGE VR+LPKC H FHV CID W +H CPLCR+ V GP ++GG
Sbjct: 111 ECAVCLSEVADGEKVRMLPKCDHGFHVECIDMWFHSHDTCPLCRAPV-GP-----DAGGE 164
Query: 261 DTGSMPQADPVA 272
+P+ +P A
Sbjct: 165 GLPRVPREEPAA 176
>Os09g0468300 Zinc finger, RING-type domain containing protein
Length = 392
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
+C+VC+ EF D E +RLLPKC H FH CIDTWL +H CP+CR++++ A+
Sbjct: 124 ECAVCISEFDDDETLRLLPKCSHVFHQDCIDTWLASHATCPVCRANLVDGASEPASDVAA 183
Query: 261 DTGSMPQADPVANT 274
+ + P P T
Sbjct: 184 ELPTAPAPRPEGAT 197
>Os08g0563500
Length = 241
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%)
Query: 173 RTVGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDT 232
R +GL+EAAI I C VCLGEF++GE +R LP C H+FH+ CID
Sbjct: 67 RGLGLEEAAIRRIPTLRYQQQQQHNKQQQCGVCLGEFREGERLRRLPPCLHSFHIDCIDA 126
Query: 233 WLRAHVNCPLCRSDV 247
WL + CPLCR+ V
Sbjct: 127 WLATALTCPLCRAHV 141
>Os02g0743100 Zinc finger, RING-type domain containing protein
Length = 396
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXX-XDCSVCLGEFQDGELVRLLPKCGHAF 225
++++ GLD+A ID++ DC+VCL EF + +RLLP CGHAF
Sbjct: 116 QQLFHLHDSGLDQAFIDALPVFAYRDIVGGDKEPFDCAVCLCEFDGEDRLRLLPVCGHAF 175
Query: 226 HVPCIDTWLRAHVNCPLCRSDVLGPAAT 253
H+ CIDTWL ++ CPLCR + P T
Sbjct: 176 HLHCIDTWLLSNSTCPLCRGTLYVPGLT 203
>Os11g0703300
Length = 170
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 36/53 (67%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATA 254
C VCL EF DGEL+RLLP+C H FH CID WLR CPLCR+ G +TA
Sbjct: 118 CPVCLSEFADGELIRLLPECMHYFHAACIDEWLRTRATCPLCRAAPAGDVSTA 170
>Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 428
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXX-----XDCSVCLGEFQDGELVRLLPKC 221
++++ G+D+A ID++ DC+VCL EF + +RLLPKC
Sbjct: 83 QQLFHLHDAGVDQAFIDALPVFLYRNVVGVGGEDGKDPFDCAVCLCEFAADDQLRLLPKC 142
Query: 222 GHAFHVPCIDTWLRAHVNCPLCRSDVL 248
HAFH+ CIDTWL +H CPLCR +L
Sbjct: 143 SHAFHLECIDTWLLSHSTCPLCRRSLL 169
>Os08g0484200 Zinc finger, RING-type domain containing protein
Length = 413
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+C+VCL EF D E +RLLP+C HAFH CID WL +HV CP+CR+++
Sbjct: 144 ECAVCLSEFDDDETLRLLPRCSHAFHADCIDAWLASHVTCPVCRANL 190
>Os02g0759400 Zinc finger, RING-type domain containing protein
Length = 437
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATE 256
+C+VCL EF+D E++R LPKC HAFH CI WL +HV CP+CR + L P TE
Sbjct: 149 ECAVCLSEFEDDEMLRFLPKCSHAFHPDCIGQWLASHVTCPVCRRN-LDPNKDTTE 203
>Os01g0736600 Zinc finger, RING-type domain containing protein
Length = 197
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 175 VGLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWL 234
VGLD AAI S CS+CL E+ DGE++R++P C H FHV C+D WL
Sbjct: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
Query: 235 RAHVNCPLCRSD-VLGPAAT 253
R + +CP+CRS + P AT
Sbjct: 155 RRNASCPVCRSSPIPTPVAT 174
>Os06g0537500
Length = 223
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 35/50 (70%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPA 251
CSVCLG FQ GE VRLLP C H +H CID WL AH CPLCRSD P+
Sbjct: 164 CSVCLGAFQLGETVRLLPACLHLYHAECIDPWLDAHTTCPLCRSDTGDPS 213
>Os12g0433100 Zinc finger, RING-type domain containing protein
Length = 212
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
C+VC+G + GE VR LP CGHAFH CID WLRAH CP+CR+DV
Sbjct: 154 QCAVCIGVVRRGETVRRLPACGHAFHAACIDGWLRAHATCPVCRADV 200
>Os10g0574400 Similar to RING finger family protein
Length = 197
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+C+VCL +F G+ +RLL C HAFH PCID+WLRAH CP+CRSD+
Sbjct: 122 ECAVCLSDFAAGDALRLLTVCRHAFHTPCIDSWLRAHTTCPVCRSDL 168
>Os02g0248900
Length = 195
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 41/72 (56%)
Query: 176 GLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLR 235
GL AAID++ CSVCL + + GE VR LP CGH +H CID WLR
Sbjct: 95 GLTAAAIDALPASEYERPRGGGGDPACSVCLEDVRGGETVRWLPACGHLYHAACIDAWLR 154
Query: 236 AHVNCPLCRSDV 247
+ CPLCRSD+
Sbjct: 155 SRTTCPLCRSDL 166
>Os11g0703200
Length = 170
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSD 246
C VCL EF DGE VR+LP+C H FHV CI TWLRA+ +CPLCR+D
Sbjct: 101 CPVCLSEFGDGEAVRVLPECMHYFHVDCIGTWLRANTSCPLCRAD 145
>Os01g0213400 Zinc finger, RING-type domain containing protein
Length = 237
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGP 250
DC+VCL E DGE VR LP C H FHV C+D WLR+ CPLCR++ P
Sbjct: 128 DCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAEAEVP 177
>Os09g0376700 Zinc finger, RING-type domain containing protein
Length = 392
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 176 GLDEAAIDSIXXXXXXX-----------XXXXXXXXDCSVCLGEFQDGELVRLLPKCGHA 224
GLD+AAID++ DC+VCL EF G+ +RLLP CGHA
Sbjct: 115 GLDQAAIDALPAFTYAELLAGAAAPNGGGGNGKRQFDCAVCLCEFDGGDRLRLLPLCGHA 174
Query: 225 FHVPCIDTWLRAHVNCPLCR 244
FH CIDTWLR+ CPLCR
Sbjct: 175 FHAACIDTWLRSSSTCPLCR 194
>Os02g0561400
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
+C+VCL E +DGE R LP+CGH FH C+D WL +H CPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0561000
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
+C+VCL E +DGE R LP+CGH FH C+D WL +H CPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0560600
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
+C+VCL E +DGE R LP+CGH FH C+D WL +H CPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0560200
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
+C+VCL E +DGE R LP+CGH FH C+D WL +H CPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-)
Length = 325
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
+C+VCL E +DGE R LP+CGH FH C+D WL +H CPLCR
Sbjct: 133 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>Os04g0419500 Zinc finger, RING-type domain containing protein
Length = 202
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLG---PAATATESG 258
C++CL +F+DGE VR+LPKC H FHV CID WL A CP CR + G A+ +ES
Sbjct: 116 CAICLSDFEDGEHVRVLPKCNHGFHVRCIDRWLLARSTCPTCRQSLFGAPQKASGCSESE 175
Query: 259 GGDTGSMPQADPV 271
G P A PV
Sbjct: 176 GSQAEPAP-ARPV 187
>Os06g0233200 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 436
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 167 HHIWYIRTVGLDEAAIDSIXXXXXXXXXXXXXX------XDCSVCLGEFQDGELVRLLPK 220
++++ GLD+A ID++ DC+VCL EF + +RLLP
Sbjct: 149 QQLFHLHDSGLDQAFIDALPVFAYREIVVGGGGDGDKEPFDCAVCLCEFDAEDRLRLLPL 208
Query: 221 CGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAAT 253
CGHAFH+ CIDTWL ++ CPLCR + P T
Sbjct: 209 CGHAFHLHCIDTWLLSNSTCPLCRGVLFVPGLT 241
>Os02g0686100 Similar to RING-H2 finger protein ATL1B
Length = 189
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
+C++CL EF+DG+ VR+LP+C H FH CIDTWLRAH +CP CR
Sbjct: 99 ECAICLVEFEDGQAVRVLPQCDHRFHAACIDTWLRAHSSCPSCR 142
>Os06g0537300
Length = 174
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGP 250
+CSVCLG Q GE VR LP C H +HV CID WL +H CP+CR++V P
Sbjct: 101 ECSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATCPICRTEVEPP 150
>Os03g0149800 Similar to RING-H2 finger protein ATL1D
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPA 251
+C+VCL EF E ++LLP C HAFH+ CIDTWL +V+CPLCR+ V G A
Sbjct: 121 ECAVCLSEFVRDERLKLLPSCSHAFHIDCIDTWLHHNVSCPLCRTVVTGGA 171
>Os06g0717600 Zinc finger, RING-type domain containing protein
Length = 232
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 174 TVGLDEAAIDSIXXXXXXXXXXXXXXXD---CSVCLGEFQDGELVRLLPKCGHAFHVPCI 230
T G+ A+ID + D CSVCL +FQ GE VR LP C H FHVPCI
Sbjct: 156 TNGMPRASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCI 215
Query: 231 DTWLRAHVNCPLCR 244
D WL H +CPLCR
Sbjct: 216 DGWLIKHGSCPLCR 229
>Os06g0539800
Length = 167
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+CSVCLG Q GE VR LP C H +HV CID WL +H CPLCR++V
Sbjct: 94 ECSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATCPLCRTEV 140
>Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 173 RTVGLDEAAIDSIXXXXXXXXXXXXX----XXDCSVCLGEFQDGELVRLLPKCGHAFHVP 228
R GLD AA+ +I +C+VCL F DG+ +RLLP+C HAFH
Sbjct: 90 RRRGLDPAAVAAIPVVPYAEVRKHRSGGGGALECAVCLTVFDDGDDLRLLPQCSHAFHPD 149
Query: 229 CIDTWLRAHVNCPLCRSDV 247
CID WL HV CPLCR+++
Sbjct: 150 CIDPWLEGHVTCPLCRANL 168
>Os01g0311400 Zinc finger, RING-type domain containing protein
Length = 198
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 204 VCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGG 259
VC+ E +DG+ R LP+CGH FH C+D WLR H CPLCR+ V+ AA GG
Sbjct: 128 VCIAELRDGDECRALPRCGHRFHASCVDGWLRLHTTCPLCRASVVALAAAPERKGG 183
>Os02g0572300
Length = 348
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
+C+VCL EF+D + +RLLP C HAFH CI WL HV CPLCR++VL
Sbjct: 128 ECAVCLLEFEDDDALRLLPACPHAFHPECIGLWLEKHVTCPLCRANVL 175
>Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 385
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+C+VCL F D +L+RLLP+C HAFH+ C+D WL + +CPLCR+ V
Sbjct: 123 ECAVCLARFDDADLLRLLPRCRHAFHLDCVDRWLESKASCPLCRARV 169
>Os02g0249200
Length = 166
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
C++CLG +DGE VR LP+C H FHV C+D WL +H CPLCR DV
Sbjct: 109 QCAICLGVVRDGEAVRRLPECKHLFHVECVDMWLYSHATCPLCRRDV 155
>Os05g0164200 Zinc finger, RING-type domain containing protein
Length = 178
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
C+VCLGE +DGEL RLLP C H FH CIDTWL CP+CR+ V
Sbjct: 112 QCAVCLGEMEDGELGRLLPACRHVFHAECIDTWLAVSSTCPVCRAAV 158
>Os05g0359500 Similar to RING-H2 finger protein ATL5C precursor
Length = 223
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
+C++C+ EF DGE RLLP+CGH FH C+D W + H CPLCR+ VL
Sbjct: 135 ECAICIAEFADGEEGRLLPRCGHRFHARCVDMWFQLHSTCPLCRAGVL 182
>Os03g0398600 Zinc finger, RING-type domain containing protein
Length = 267
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
DC+VC+ E GE R+LP+CGH FHV C+D WLR++ CPLCR V+
Sbjct: 90 DCAVCITELAAGESARVLPRCGHGFHVECVDMWLRSNSTCPLCRCAVI 137
>Os10g0544600 Fibrillarin family protein
Length = 233
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
CSVCL +F+ GE+ R LP C H FHVPCID WL H +CPLCR D+
Sbjct: 188 CSVCLQDFRVGEMARRLPSCRHVFHVPCIDCWLVRHGSCPLCRRDI 233
>Os06g0666500 Zinc finger, RING-type domain containing protein
Length = 181
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
C++CL +F DGE VRLLP CGH FHV CID WL AH +CP CR
Sbjct: 111 CAICLSDFADGERVRLLPACGHRFHVVCIDRWLLAHCSCPTCR 153
>Os06g0540400 Zinc finger, RING-type domain containing protein
Length = 168
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGP 250
CSVCLG + GE+VR LP C H +HV CID WL +H CPLCR++V P
Sbjct: 103 QCSVCLGAVRGGEMVRRLPACKHLYHVECIDMWLASHATCPLCRTEVEPP 152
>Os06g0271600 Zinc finger, RING-type domain containing protein
Length = 173
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPA 251
DC+VCL E + G+ R LP+C H+FH PC+D+WLR CP+CR+DV+G A
Sbjct: 89 DCAVCLEELEAGDRCRRLPRCEHSFHAPCVDSWLRKSRWCPVCRADVVGRA 139
>Os05g0360400 Zinc finger, RING-type domain containing protein
Length = 200
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
+C+VC+ EF+DG+ RLLP+CGH FH CI WL+ H CPLCR+ VL
Sbjct: 132 ECAVCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
>Os06g0155200
Length = 221
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
CS+CLG + GE VR LP CGH FH C+D WLRAH CPLCR+ V
Sbjct: 164 QCSICLGLARVGEAVRRLPSCGHLFHAGCVDEWLRAHATCPLCRAAV 210
>Os01g0213000 Zinc finger, RING-type domain containing protein
Length = 166
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPA 251
+C+VCLG ++GE VR LP C HAFH C+D WLR CPLCR+DV PA
Sbjct: 100 ECAVCLGAVEEGETVRALPCCPHAFHARCVDAWLRLRPTCPLCRADVPVPA 150
>Os02g0676500 Zinc finger, RING-type domain containing protein
Length = 210
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
CS+CLGE+ + E++R++PKC H FH+ CID WL+ CP+CR
Sbjct: 108 QCSICLGEYNEKEILRIMPKCRHNFHLSCIDVWLQKQTTCPICR 151
>Os08g0550400 Similar to RING-H2 finger protein ATL5P
Length = 260
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
CSVCL + +DGE R LP+CGH FH+ CID+WL H +CPLCR
Sbjct: 202 CSVCLQDLEDGERARRLPECGHTFHLRCIDSWLLRHASCPLCR 244
>Os06g0167200 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 363
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
DC+VCL EF + +RLLP CGHAFH+ CIDTWL ++ CPLCR
Sbjct: 130 DCAVCLCEFAGDDRLRLLPVCGHAFHIDCIDTWLLSNSTCPLCR 173
>Os02g0248280
Length = 189
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATE 256
CSVCL + Q GE+VR LP C H FHV CID WL +H CPLCR +V PA +
Sbjct: 111 CSVCLEDVQAGEMVRQLPACRHLFHVGCIDMWLHSHSTCPLCRCNVSPPATIVVK 165
>Os03g0188200 Zinc finger, RING-type domain containing protein
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
+C+VCL EF D + +R+LP C H FH CID WL A V CPLCR+++ P + +
Sbjct: 132 ECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTAPPVSLAAAESS 191
Query: 261 D 261
D
Sbjct: 192 D 192
>Os04g0192250
Length = 186
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 201 DCSVCLGEF-QDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+C+VCL EF DGE + LLP C H FH CID WL AHV CP+CR+D+
Sbjct: 73 ECAVCLAEFVDDGEKLCLLPGCCHVFHTACIDVWLAAHVTCPVCRADL 120
>Os02g0249300 Zinc finger, RING-type domain containing protein
Length = 199
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 32/43 (74%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
C+VCL QDG+ VR LP CGHAFH C+D WLRAH CP+CR
Sbjct: 120 CAVCLSGMQDGDAVRALPGCGHAFHAGCVDAWLRAHGTCPVCR 162
>Os01g0755700 Zinc finger, RING-type domain containing protein
Length = 238
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 173 RTVGLDEAAIDSIXXXXXXXXX---XXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPC 229
+ VGLD +AI ++ +C++CLG Q+ + VR+LP C H FHV C
Sbjct: 85 KQVGLDPSAIAALPTAAYGKVAGGDAAGGTTECAICLGAMQEADAVRVLPACRHVFHVAC 144
Query: 230 IDTWLRAHVNCPLCRSDV 247
ID WL + +CP+CR+ V
Sbjct: 145 IDKWLASSSSCPVCRAGV 162
>Os02g0249101
Length = 177
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
C+VCL Q+GE VR LP C H FHV CID WL +H CPLCR+ V E G
Sbjct: 115 QCAVCLSIVQEGETVRQLPACKHLFHVGCIDMWLHSHSTCPLCRASV--------EPLGK 166
Query: 261 DTGSMPQADPV 271
+T QA PV
Sbjct: 167 ETPLKDQAPPV 177
>Os07g0146300
Length = 209
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
+C VCL E ++G+ R LP+CGH FH C+D W+ +H CPLCR V+
Sbjct: 107 ECVVCLAELEEGDEARFLPRCGHGFHAECVDMWVGSHSTCPLCRLTVV 154
>Os12g0620100
Length = 153
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRS 245
C+VCL E++DG+ +R LP CGHAFH C+D WLR CP+CRS
Sbjct: 92 CAVCLAEYEDGDELRRLPGCGHAFHRRCVDEWLRRRPTCPVCRS 135
>Os06g0536600
Length = 239
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+C+VCLG ++GE+VR LP C H +H CID WL AH CPLCR ++
Sbjct: 181 ECAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCPLCRREL 227
>Os03g0788100 Similar to RING-H2 finger protein ATL1P (RING-H2 finger protein
ATL3)
Length = 208
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCR 244
CS+CL + DG+++R+LP+CGH FH C+D WLR H CP+CR
Sbjct: 142 CSICLDNYGDGDVLRMLPECGHLFHRECVDPWLRQHPTCPVCR 184
>Os06g0534900 Zinc finger, RING-type domain containing protein
Length = 412
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 32/46 (69%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
C+VCL + GE VR LP CGH FHV CID WL AH CPLCR D+
Sbjct: 148 CAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDL 193
>Os02g0557300 Similar to RING-H2 finger protein ATL1G
Length = 233
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 202 CSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATAT 255
CSVCL ++Q E ++ +P CGH FH+ CID WL + CPLCR +L TA+
Sbjct: 99 CSVCLADYQPDERLQRIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTAS 152
>Os02g0247900
Length = 209
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDV 247
+CSVCLGE + GE + LP C H FH CID WL +H CP+CRS V
Sbjct: 143 ECSVCLGEMRQGEAAKRLPVCLHVFHEECIDMWLGSHATCPICRSPV 189
>Os05g0526600 Zinc finger, RING-type domain containing protein
Length = 207
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 175 VGLDEAAIDSIXXX-XXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTW 233
VGLD A I S CS+CL E+++GE+ R++P+C H FH+ C+D W
Sbjct: 104 VGLDPAVIASYPKVPFSRAATGADAEAACSICLCEYKEGEMQRMMPECRHRFHLMCLDAW 163
Query: 234 LRAHVNCPLCRSD 246
LR +CP+CRS
Sbjct: 164 LRRSASCPVCRSS 176
>Os01g0213100
Length = 231
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 176 GLDEAAIDSIXXXXXXXXXXXXXXXDCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLR 235
GL E AI ++ +CS+CL DGE+ R LP+C H FH C+D WL
Sbjct: 117 GLGEDAIAALPKFEYRGTGDECDRWECSICLCAVADGEVARQLPRCMHLFHRGCVDMWLV 176
Query: 236 AHVNCPLCRSDVL 248
AH CP+CR++V+
Sbjct: 177 AHTTCPVCRAEVV 189
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,529,062
Number of extensions: 289614
Number of successful extensions: 1782
Number of sequences better than 1.0e-10: 104
Number of HSP's gapped: 1827
Number of HSP's successfully gapped: 107
Length of query: 415
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 312
Effective length of database: 11,657,759
Effective search space: 3637220808
Effective search space used: 3637220808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)