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Os07g0146300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.15 (0.0286) R2 : 0.789
β1 : 4.02 (0.108) R2dD : 0.717 R2D : 0.567
β2 : 1.25 (0.0713) R2dC : 0.145 R2C : 0.139
β3 : -0.967 (0.0966) R2dE : 0.0519 R2E : -0.0499
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.494 (0.0625) R2dN8 : 0.0417 R2N8 : -0.0431
σ : 0.531
deviance : 129.95
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C
peak time of C : 20.6
E
wheather : temperature
threshold : 19.7
memory length : 177
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.94 0.508 7.13 4.03 1.21 -0.727 -1.65 0.887 0.523 20.7 20.46 99 -- --
120.71 0.512 7.15 3.89 1.22 -0.793 -1.79 -- 0.5 20.8 20.4 141 -- --
125.59 0.522 7.13 4.13 1.21 -0.721 -- 1.07 0.535 20.6 20.54 76 -- --
129.95 0.531 7.15 4.02 1.25 -0.967 -- -- 0.494 20.6 19.7 177 -- --
206.09 0.672 7.09 4.13 -- -0.861 -- 1.03 0.546 -- 20.54 76 -- --
144.57 0.564 7.19 3.65 1.26 -- -1.86 -- 0.337 21.2 -- -- -- --
156.77 0.586 7.19 3.72 1.28 -- -- -- 0.34 21.1 -- -- -- --
211.86 0.681 7.11 3.94 -- -0.907 -- -- 0.504 -- 20.54 76 -- --
510.84 1.05 7.28 -- 1.28 1.34 -- -- -0.0884 21.5 16.7 101 -- --
250.53 0.74 7.15 3.72 -- -- -- -- 0.332 -- -- -- -- --
520.94 1.07 7.28 -- 1.27 -- -- -- -0.0743 21.3 -- -- -- --
565.06 1.11 7.28 -- -- 1.79 -- -- -0.234 -- 18.5 806 -- --
615.53 1.16 7.25 -- -- -- -- -- -0.0804 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 105.46 atmosphere 995 43200 < th dose dependent rect. 15 1
2 106.01 atmosphere 995 43200 < th dose independent rect. 14 2
4 106.37 atmosphere 995 43200 > th dose independent rect. 14 2
6 106.50 humidity 80 43200 > th dose independent rect. 23 2
7 106.62 wind 9 43200 > th dose dependent rect. 20 4
8 106.63 wind 9 43200 > th dose dependent rect. 20 7
24 107.14 atmosphere 995 43200 > th dose independent rect. 7 10
34 107.25 atmosphere 995 43200 > th dose independent rect. 7 15
58 107.42 atmosphere 995 43200 < th dose dependent rect. 14 8
59 107.47 atmosphere 995 43200 > th dose independent sin 22 NA
67 107.51 atmosphere 995 43200 < th dose independent rect. 7 15
70 107.52 atmosphere 995 43200 < th dose independent rect. 7 10
72 107.52 wind 9 43200 > th dose dependent rect. 17 15
101 107.62 wind 3 43200 > th dose dependent rect. 14 19
105 107.66 wind 9 43200 > th dose dependent sin 13 NA
116 107.70 atmosphere 995 43200 < th dose independent sin 22 NA
126 107.77 atmosphere 995 43200 > th dose independent rect. 11 10
149 107.91 humidity 80 43200 < th dose independent rect. 22 3
197 108.29 wind 9 43200 > th dose dependent rect. 20 1
199 108.31 wind 5 43200 < th dose independent rect. 15 17
203 108.34 wind 5 43200 < th dose independent rect. 14 19
213 108.44 wind 9 43200 > th dose independent rect. 20 7
234 108.59 wind 5 43200 > th dose independent rect. 14 18
250 108.68 wind 9 43200 < th dose dependent rect. 14 20
263 108.76 wind 9 43200 > th dose independent rect. 20 5
287 108.99 humidity 90 14400 > th dose dependent rect. 21 2
301 109.08 wind 9 43200 < th dose independent rect. 20 1
302 109.08 wind 3 43200 > th dose dependent sin 13 NA
316 109.13 wind 9 43200 > th dose independent rect. 20 1
321 109.17 wind 9 43200 < th dose independent rect. 20 8
342 109.28 wind 3 43200 > th dose dependent rect. 6 1
350 109.33 wind 1 43200 > th dose dependent rect. 2 19
357 109.34 wind 1 43200 > th dose dependent rect. 24 22
370 109.37 humidity 90 14400 < th dose independent rect. 18 1
394 109.46 wind 1 43200 > th dose dependent rect. 18 23
397 109.48 wind 9 43200 > th dose independent rect. 20 11
401 109.49 wind 9 43200 < th dose dependent rect. 24 21
430 109.57 wind 1 43200 > th dose dependent no NA NA
452 109.61 wind 9 43200 < th dose dependent rect. 18 23
463 109.64 wind 1 43200 > th dose dependent rect. 6 23
474 109.66 wind 1 43200 > th dose dependent rect. 2 16
497 109.71 wind 9 43200 < th dose independent rect. 20 5
502 109.72 radiation 10 43200 < th dose dependent rect. 9 1
511 109.74 wind 9 43200 < th dose dependent no NA NA
518 109.75 radiation 1 43200 < th dose dependent rect. 20 8
547 109.81 wind 7 43200 < th dose dependent rect. 2 16
583 109.85 wind 5 43200 < th dose independent sin 14 NA
595 109.85 wind 9 43200 < th dose dependent rect. 6 23
598 109.86 wind 9 43200 < th dose dependent rect. 6 1
614 109.88 wind 1 43200 > th dose dependent rect. 4 13
637 109.92 wind 3 43200 < th dose dependent rect. 7 3
661 109.95 atmosphere 1000 43200 < th dose dependent rect. 11 1
699 110.01 wind 9 43200 < th dose independent rect. 20 11
733 110.07 humidity 80 43200 < th dose dependent rect. 22 1
752 110.10 wind 9 43200 < th dose dependent rect. 8 23
764 110.12 wind 9 43200 > th dose independent rect. 18 13
803 110.18 wind 3 43200 > th dose independent rect. 3 14
804 110.18 atmosphere 1000 43200 < th dose dependent rect. 9 1
807 110.19 wind 9 43200 > th dose independent rect. 17 15
808 110.19 wind 1 43200 > th dose dependent sin 2 NA
844 110.24 radiation 1 43200 < th dose dependent rect. 20 6
854 110.26 wind 5 43200 > th dose independent sin 14 NA
855 110.26 wind 9 43200 > th dose independent rect. 18 10
886 110.32 wind 9 43200 < th dose dependent sin 12 NA
887 110.32 atmosphere 1000 43200 < th dose dependent rect. 8 7
892 110.33 wind 7 43200 < th dose dependent sin 2 NA
893 110.33 atmosphere 1000 43200 < th dose dependent rect. 9 4
903 110.35 wind 9 43200 < th dose independent rect. 18 10
984 110.48 wind 9 43200 > th dose dependent rect. 13 20