Os01g0755700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os01g0755700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 330.06 | 0.854 | 11.6 | -1.94 | 2.33 | 1.62 | 0.96 | 4.7 | 0.6 | 22.2 | 69.23 | 1432 | 11 | 1.2 |
| 352.15 | 0.874 | 11.5 | -1.41 | 2.04 | 1.56 | 1.12 | -- | 0.551 | 22.1 | 59.24 | 1132 | 11.2 | 2.67 |
| 317.39 | 0.83 | 11.6 | -1.86 | 2.29 | 1.89 | -- | 4.92 | 0.599 | 22.2 | 69.77 | 1338 | 11.7 | 0.0149 |
| 356.62 | 0.88 | 11.5 | -1.54 | 1.93 | 1.6 | -- | -- | 0.539 | 22.2 | 58.51 | 1103 | 11.6 | 2.21 |
| 459.81 | 0.999 | 11.8 | -1.22 | -- | 3.01 | -- | 3.64 | 0.0636 | -- | 22.91 | 2438 | 12.5 | 0.0324 |
| 403.61 | 0.942 | 11.5 | -1.75 | 2.33 | -- | 1.07 | -- | 0.511 | 22.1 | -- | -- | -- | -- |
| 407.97 | 0.946 | 11.5 | -1.79 | 2.32 | -- | -- | -- | 0.507 | 22.2 | -- | -- | -- | -- |
| 378.23 | 0.906 | 11.5 | -1.71 | -- | 2.89 | -- | -- | 0.359 | -- | 16.45 | 819 | 12.8 | 5.58 |
| 416.94 | 0.951 | 11.5 | -- | 1.85 | 1.9 | -- | -- | 0.615 | 22.2 | 57.98 | 1132 | 11.5 | 1.95 |
| 734.5 | 1.27 | 11.5 | -1.76 | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
| 492.83 | 1.04 | 11.5 | -- | 2.31 | -- | -- | -- | 0.707 | 22.1 | -- | -- | -- | -- |
| 448.54 | 0.986 | 11.5 | -- | -- | 2.97 | -- | -- | 0.621 | -- | 18.79 | 868 | 12.6 | 4.72 |
| 816.31 | 1.33 | 11.4 | -- | -- | -- | -- | -- | 0.707 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 297.59 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 20 | 308.66 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 21 | 308.88 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 24 | 309.44 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 27 | 309.66 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 29 | 309.93 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 52 | 311.52 | wind | 1 | 14400 | > th | dose dependent | rect. | 2 | 3 |
| 60 | 311.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 87 | 313.60 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 12 |
| 88 | 313.63 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 104 | 314.51 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 108 | 314.58 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 123 | 315.08 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 138 | 315.46 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 140 | 315.55 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 145 | 315.70 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 152 | 316.01 | wind | 3 | 43200 | < th | dose independent | sin | 7 | NA |
| 167 | 316.30 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 187 | 316.77 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 196 | 317.05 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 219 | 317.41 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 220 | 317.42 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 221 | 317.45 | wind | 3 | 43200 | > th | dose independent | sin | 6 | NA |
| 227 | 317.53 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 229 | 317.54 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 230 | 317.55 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 279 | 318.24 | wind | 3 | 43200 | < th | dose dependent | sin | 7 | NA |
| 322 | 318.82 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 325 | 318.89 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 350 | 319.26 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 557 | 322.13 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 570 | 322.30 | wind | 9 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 592 | 322.64 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 628 | 323.18 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 638 | 323.34 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 714 | 324.38 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 739 | 324.57 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 746 | 324.63 | wind | 9 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 837 | 325.54 | wind | 1 | 43200 | > th | dose dependent | sin | 9 | NA |
| 889 | 325.91 | wind | 3 | 14400 | > th | dose dependent | rect. | 4 | 7 |
| 896 | 326.02 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 930 | 326.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 1 |