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Os11g0610600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RING-H2 finger protein ATL2N.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0198) R2 : 0.00469
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0612 (0.0418) R2dN8 : 0.00606 R2N8 : 0.00469
σ : 0.374
deviance : 64.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.54 0.314 12.6 0.654 0.437 -0.399 0.0389 0.363 0.201 15.1 19.6 147 -- --
44.78 0.312 12.6 0.628 0.447 -0.5 0.128 -- 0.203 15.2 19.3 201 -- --
44.54 0.311 12.6 0.657 0.437 -0.398 -- 0.375 0.202 15.1 19.63 147 -- --
44.71 0.311 12.6 0.656 0.44 -0.56 -- -- 0.189 15.2 19.1 220 -- --
52.24 0.337 12.6 0.758 -- -0.339 -- 0.706 0.241 -- 20.8 751 -- --
50.75 0.334 12.6 0.47 0.366 -- 0.245 -- 0.12 15.4 -- -- -- --
50.94 0.334 12.6 0.475 0.367 -- -- -- 0.122 15.3 -- -- -- --
53.45 0.34 12.6 0.62 -- -0.396 -- -- 0.191 -- 20.5 833 -- --
53.99 0.342 12.6 -- 0.416 -0.281 -- -- 0.109 15 20.2 128 -- --
58.52 0.357 12.6 0.459 -- -- -- -- 0.112 -- -- -- -- --
56.88 0.353 12.6 -- 0.357 -- -- -- 0.069 15.4 -- -- -- --
59.32 0.359 12.7 -- -- 0.29 -- -- 0.0326 -- 28.2 266 -- --
64.09 0.374 12.6 -- -- -- -- -- 0.0612 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.19 temperature 20 30 > th dose independent rect. 19 16
3 40.75 temperature 20 270 > th dose independent rect. 17 16
12 41.14 temperature 30 10 < th dose dependent sin 7 NA
24 41.71 temperature 10 10 > th dose dependent sin 7 NA
29 42.00 temperature 20 90 < th dose independent sin 7 NA
54 42.47 temperature 20 90 > th dose independent sin 8 NA
61 42.58 temperature 15 30 > th dose dependent rect. 19 16
65 42.61 temperature 30 10 < th dose dependent rect. 22 19
66 42.64 temperature 20 10 > th dose dependent rect. 1 10
72 42.69 temperature 25 10 > th dose independent rect. 4 7
78 42.79 temperature 20 90 < th dose independent rect. 23 12
82 42.86 temperature 20 90 < th dose independent rect. 23 9
87 42.88 temperature 20 270 < th dose independent rect. 22 7
88 42.89 temperature 20 270 < th dose independent rect. 21 9
99 42.97 temperature 30 10 < th dose dependent rect. 22 17
101 42.99 temperature 20 90 < th dose independent rect. 23 16
127 43.21 temperature 20 90 > th dose independent rect. 1 10
128 43.21 temperature 25 720 < th dose dependent rect. 18 10
157 43.39 temperature 20 10 > th dose dependent rect. 4 7
170 43.46 temperature 15 270 > th dose dependent rect. 17 16
174 43.48 temperature 20 720 < th dose independent rect. 17 12
178 43.49 temperature 30 270 < th dose dependent rect. 21 8
180 43.50 temperature 20 90 < th dose independent rect. 21 18
184 43.51 temperature 25 90 < th dose dependent rect. 23 12
191 43.52 temperature 30 10 < th dose dependent rect. 22 10
197 43.56 temperature 20 90 < th dose independent rect. 21 14
200 43.57 temperature 20 720 < th dose independent rect. 18 9
201 43.57 temperature 20 90 > th dose independent rect. 23 12
227 43.63 temperature 15 270 > th dose dependent rect. 1 9
228 43.63 temperature 15 30 > th dose dependent rect. 17 18
233 43.64 temperature 25 90 < th dose dependent rect. 23 8
254 43.71 temperature 30 10 < th dose dependent rect. 22 8
260 43.73 temperature 20 10 < th dose independent rect. 24 7
266 43.74 temperature 20 720 > th dose independent sin 14 NA
287 43.77 temperature 30 10 < th dose dependent rect. 22 14
293 43.79 temperature 20 720 > th dose independent rect. 17 9
295 43.79 temperature 20 10 < th dose independent rect. 24 12
299 43.80 temperature 20 720 < th dose independent sin 14 NA
314 43.84 temperature 20 720 > th dose independent rect. 19 7
359 43.93 temperature 25 720 < th dose dependent sin 13 NA
366 43.94 temperature 25 270 < th dose dependent rect. 21 12
378 43.96 temperature 20 270 < th dose dependent rect. 23 6
455 44.07 temperature 20 30 > th dose independent rect. 17 23
519 44.16 temperature 20 90 > th dose independent rect. 3 23
560 44.21 radiation 1 270 < th dose dependent rect. 20 15
583 44.23 temperature 25 10 < th dose dependent rect. 24 8
729 44.39 temperature 25 10 < th dose dependent rect. 24 12
756 44.41 temperature 20 90 > th dose independent rect. 23 23
774 44.42 temperature 20 90 < th dose independent rect. 23 22
818 44.47 atmosphere 1005 270 < th dose independent rect. 13 12
949 44.59 temperature 20 270 > th dose independent rect. 1 22
973 44.61 temperature 20 90 < th dose independent rect. 11 22