Os03g0188200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os03g0188200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.77 | 0.659 | 4.56 | -0.909 | 1.49 | 1.95 | 0.179 | 2.43 | -0.0311 | 8.58 | 29.54 | 385 | -- | -- |
| 201.84 | 0.662 | 4.52 | -0.481 | 1.51 | 2.02 | 0.423 | -- | 0.0377 | 8.72 | 31.81 | 345 | -- | -- |
| 196.85 | 0.653 | 4.57 | -0.922 | 1.48 | 1.95 | -- | 2.53 | -0.0354 | 8.53 | 29.5 | 398 | -- | -- |
| 202.42 | 0.663 | 4.52 | -0.469 | 1.51 | 2.06 | -- | -- | 0.0239 | 8.73 | 32.36 | 341 | -- | -- |
| 290.53 | 0.794 | 4.57 | -0.637 | -- | 3.06 | -- | 2.25 | 0.113 | -- | 31.76 | 526 | -- | -- |
| 250.02 | 0.741 | 4.59 | -0.961 | 1.93 | -- | 0.716 | -- | -0.312 | 7.78 | -- | -- | -- | -- |
| 251.5 | 0.743 | 4.59 | -0.943 | 1.93 | -- | -- | -- | -0.313 | 7.78 | -- | -- | -- | -- |
| 296.04 | 0.801 | 4.53 | -0.188 | -- | 3.18 | -- | -- | 0.198 | -- | 33.14 | 527 | -- | -- |
| 207.56 | 0.671 | 4.51 | -- | 1.47 | 2.25 | -- | -- | 0.114 | 8.91 | 31.88 | 339 | -- | -- |
| 453.87 | 0.995 | 4.64 | -0.919 | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
| 274.93 | 0.776 | 4.57 | -- | 1.93 | -- | -- | -- | -0.208 | 7.82 | -- | -- | -- | -- |
| 296.88 | 0.802 | 4.52 | -- | -- | 3.24 | -- | -- | 0.233 | -- | 32.87 | 534 | -- | -- |
| 476.16 | 1.02 | 4.61 | -- | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 18 |
| 3 | 190.49 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 20 |
| 4 | 190.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 30 | 193.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 35 | 193.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 5 |
| 40 | 194.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 56 | 194.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 10 |
| 113 | 195.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 130 | 196.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 166 | 196.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 209 | 197.63 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 215 | 197.66 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 247 | 197.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 12 |
| 249 | 198.02 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 353 | 198.82 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 388 | 199.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 394 | 199.14 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 19 |
| 410 | 199.33 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 461 | 199.64 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 470 | 199.68 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 549 | 200.12 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 585 | 200.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 590 | 200.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 595 | 200.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 632 | 200.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 698 | 200.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 819 | 201.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 834 | 201.44 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 14 |
| 889 | 201.62 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 907 | 201.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 14 |
| 973 | 201.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 985 | 201.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 20 |