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Os12g0596200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RING-H2 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.37 (0.0362) R2 : 0.559
β1 : -0.877 (0.133) R2dD : 0.0493 R2D : 0.0786
β2 : 1.72 (0.0935) R2dC : 0.35 R2C : 0.348
β3 : 1.05 (0.103) R2dE : 0.102 R2E : 0.093
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.5 (0.0791) R2dN8 : 0.0584 R2N8 : 0.0274
σ : 0.673
deviance : 208.79
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C
peak time of C : 17.1
E
wheather : humidity
threshold : 79.96
memory length : 1348
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 10.9
open length of G : 1.08

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
203.79 0.671 6.38 -0.969 1.77 1.17 1.03 0.845 0.497 17.1 80.01 1355 11 1.05
206.2 0.669 6.37 -0.885 1.72 1.08 1.05 -- 0.491 17.1 79.87 1347 11 1.07
206.39 0.669 6.38 -0.961 1.78 1.19 -- 0.898 0.498 17.2 80.03 1355 11 1.07
208.79 0.673 6.37 -0.877 1.72 1.05 -- -- 0.5 17.1 79.96 1348 10.9 1.08
340.91 0.86 6.39 -0.992 -- 1.58 -- 1.29 0.497 -- 70 729 11.2 1.43
250.59 0.742 6.41 -1.11 1.79 -- 1.07 -- 0.328 17.2 -- -- -- --
253.44 0.746 6.41 -1.11 1.8 -- -- -- 0.333 17.2 -- -- -- --
337.53 0.856 6.42 -0.994 -- 1.36 -- -- 0.402 -- 69.35 727 11.2 1.52
227.96 0.703 6.33 -- 1.82 1.21 -- -- 0.633 17.1 80 1352 11.1 1.18
422.8 0.961 6.38 -1.18 -- -- -- -- 0.288 -- -- -- -- --
286.19 0.791 6.38 -- 1.82 -- -- -- 0.457 17.2 -- -- -- --
302.39 0.81 6.38 -- -- 1.43 -- -- 0.325 -- 55.31 731 10.8 2.18
459.4 1 6.35 -- -- -- -- -- 0.418 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 204.68 humidity 80.0 1440 > th dose independent rect. 11 1
2 205.36 humidity 80.0 1440 < th dose independent rect. 11 1
5 208.32 humidity 80.0 1440 > th dose independent rect. 10 3
6 208.95 humidity 80.0 1440 > th dose dependent rect. 11 1
8 209.28 humidity 80.0 1440 > th dose dependent rect. 10 3
10 209.80 humidity 80.0 1440 < th dose independent rect. 9 5
11 209.87 humidity 80.0 1440 > th dose independent rect. 9 5
18 210.81 humidity 80.0 1440 > th dose dependent rect. 9 5
54 216.38 precipitation 0.1 14400 > th dose dependent rect. 16 2
56 216.54 precipitation 0.1 14400 > th dose independent rect. 15 2
58 216.59 precipitation 0.1 14400 < th dose independent rect. 15 2
59 216.59 precipitation 0.1 14400 < th dose dependent rect. 15 2
94 217.95 precipitation 0.1 14400 > th dose independent rect. 13 6
100 218.06 precipitation 0.1 14400 < th dose independent rect. 13 6
102 218.06 precipitation 0.1 14400 < th dose dependent rect. 13 6
104 218.12 precipitation 0.1 14400 > th dose independent rect. 11 6
109 218.29 precipitation 0.1 14400 < th dose independent rect. 18 1
110 218.29 precipitation 0.1 14400 < th dose dependent rect. 18 1
113 218.32 precipitation 0.1 14400 > th dose independent rect. 18 1
134 218.53 humidity 80.0 14400 > th dose independent rect. 13 1
144 218.77 humidity 80.0 14400 > th dose independent rect. 10 4
148 218.81 precipitation 0.1 14400 > th dose dependent rect. 11 6
151 218.85 humidity 80.0 1440 < th dose independent sin 2 NA
195 219.40 humidity 80.0 14400 > th dose independent rect. 10 1
200 219.45 precipitation 0.1 14400 > th dose dependent rect. 18 1
206 219.58 humidity 80.0 1440 > th dose independent sin 2 NA
211 219.62 humidity 80.0 14400 < th dose independent rect. 13 1
233 219.94 precipitation 0.1 14400 > th dose dependent rect. 13 7
263 220.24 humidity 80.0 14400 < th dose independent rect. 11 3
267 220.28 humidity 70.0 1440 > th dose dependent rect. 2 13
287 220.50 humidity 70.0 1440 > th dose dependent rect. 4 11
290 220.51 humidity 70.0 14400 < th dose dependent rect. 11 2
308 220.71 humidity 60.0 14400 < th dose dependent rect. 13 20
315 220.76 humidity 60.0 14400 < th dose dependent sin 15 NA
328 220.91 humidity 70.0 14400 < th dose dependent rect. 19 19
329 220.93 humidity 60.0 14400 < th dose dependent rect. 13 7
340 220.94 humidity 80.0 14400 > th dose dependent rect. 10 1
342 220.95 humidity 60.0 14400 < th dose independent rect. 11 2
360 221.07 humidity 70.0 14400 < th dose dependent rect. 8 6
364 221.09 humidity 70.0 14400 > th dose independent rect. 19 14
388 221.15 humidity 90.0 14400 > th dose independent rect. 20 1
439 221.36 humidity 60.0 14400 < th dose independent rect. 18 19
447 221.42 humidity 70.0 14400 < th dose independent rect. 19 14
465 221.50 humidity 70.0 1440 > th dose dependent sin 3 NA
510 221.61 humidity 60.0 14400 < th dose independent rect. 15 22
515 221.62 humidity 70.0 14400 < th dose dependent sin 6 NA
534 221.68 humidity 60.0 14400 < th dose independent rect. 8 6
537 221.68 humidity 60.0 14400 < th dose dependent rect. 15 23
539 221.69 humidity 60.0 14400 < th dose independent rect. 18 23
557 221.76 wind 1.0 43200 < th dose independent rect. 5 2
581 221.86 humidity 60.0 14400 < th dose independent rect. 8 9
584 221.87 humidity 60.0 14400 < th dose independent sin 3 NA
637 221.97 humidity 60.0 14400 < th dose independent rect. 8 12
638 221.97 humidity 60.0 14400 < th dose independent rect. 11 23
669 222.00 humidity 60.0 14400 < th dose dependent rect. 8 12
710 222.02 humidity 60.0 14400 < th dose dependent no NA NA
711 222.02 humidity 90.0 1440 < th dose dependent rect. 11 1
845 222.11 humidity 60.0 14400 < th dose independent no NA NA
931 222.17 precipitation 0.1 1440 > th dose dependent rect. 5 8
996 222.29 humidity 70.0 14400 > th dose independent rect. 7 3