Os12g0115600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os12g0115600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.35 | 0.555 | 11.9 | 0.282 | 1.24 | -1.62 | 0.298 | 0.264 | -0.382 | 17.8 | 75.33 | 962 | 6.98 | -- |
| 139.2 | 0.549 | 11.9 | 0.269 | 1.21 | -1.6 | 0.292 | -- | -0.374 | 17.9 | 76.35 | 958 | 7.07 | -- |
| 139.27 | 0.55 | 11.9 | 0.275 | 1.22 | -1.6 | -- | 0.282 | -0.371 | 17.9 | 76.47 | 971 | 7.28 | -- |
| 139.37 | 0.55 | 11.9 | 0.25 | 1.22 | -1.58 | -- | -- | -0.371 | 17.8 | 76.37 | 973 | 7.26 | -- |
| 164.49 | 0.597 | 11.8 | 0.0413 | -- | -2.31 | -- | -0.255 | -0.172 | -- | 126.7 | 1079 | 9.74 | -- |
| 219.66 | 0.695 | 11.8 | 0.0511 | 1.49 | -- | 0.233 | -- | -0.196 | 16.6 | -- | -- | -- | -- |
| 219.81 | 0.694 | 11.8 | 0.0527 | 1.49 | -- | -- | -- | -0.195 | 16.6 | -- | -- | -- | -- |
| 164.62 | 0.598 | 11.8 | 0.0591 | -- | -2.32 | -- | -- | -0.169 | -- | 127 | 1083 | 9.79 | -- |
| 140.98 | 0.553 | 11.9 | -- | 1.21 | -1.56 | -- | -- | -0.396 | 17.8 | 76.64 | 972 | 7.26 | -- |
| 338.58 | 0.86 | 11.8 | -0.00493 | -- | -- | -- | -- | -0.234 | -- | -- | -- | -- | -- |
| 219.88 | 0.694 | 11.8 | -- | 1.49 | -- | -- | -- | -0.201 | 16.6 | -- | -- | -- | -- |
| 164.71 | 0.598 | 11.8 | -- | -- | -2.32 | -- | -- | -0.176 | -- | 126.7 | 1082 | 9.77 | -- |
| 338.58 | 0.859 | 11.8 | -- | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.96 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 128.10 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 16 | 128.15 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 32 | 133.81 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 33 | 134.12 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 38 | 136.86 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 39 | 138.03 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 55 | 140.71 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 61 | 142.00 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 80 | 142.65 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 81 | 142.71 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 82 | 142.77 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 86 | 143.48 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 96 | 145.46 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 97 | 145.50 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 114 | 146.03 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 167 | 148.00 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 172 | 148.31 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 175 | 148.40 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 179 | 148.57 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 180 | 148.59 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 182 | 148.80 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 186 | 148.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 188 | 148.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 240 | 150.71 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 248 | 151.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 250 | 151.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 270 | 151.46 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 276 | 151.56 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 280 | 151.68 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 303 | 152.13 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 307 | 152.25 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 448 | 155.40 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 452 | 155.46 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 454 | 155.50 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 462 | 155.56 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 464 | 155.60 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 487 | 155.72 | humidity | 60.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 498 | 155.77 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 525 | 155.87 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 539 | 155.93 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 540 | 155.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 542 | 155.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 549 | 156.07 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 564 | 156.10 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 587 | 156.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 593 | 156.35 | humidity | 50.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 609 | 156.38 | humidity | 50.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 695 | 157.27 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 941 | 158.82 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 942 | 158.84 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 944 | 158.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 965 | 158.95 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |