Os01g0736600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0736600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, RING-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.28 | 0.491 | 9.04 | -0.142 | 1.83 | -1.3 | 1.43 | -1.26 | -0.122 | 3.2 | 25.7 | 10 | -- | -- |
| 111.26 | 0.495 | 9.06 | -0.341 | 1.83 | -1.2 | 0.974 | -- | -0.166 | 3.23 | 26.1 | 6 | -- | -- |
| 114.1 | 0.501 | 9.06 | -0.304 | 1.81 | -1.21 | -- | -0.325 | -0.153 | 3.26 | 25.71 | 6 | -- | -- |
| 114.26 | 0.498 | 9.06 | -0.357 | 1.83 | -1.19 | -- | -- | -0.167 | 3.28 | 25.91 | 6 | -- | -- |
| 270.77 | 0.771 | 9.02 | -0.0835 | -- | 0.205 | -- | 1.39 | 0.112 | -- | 20.27 | 18 | -- | -- |
| 132.99 | 0.541 | 9 | -0.0633 | 1.56 | -- | 0.9 | -- | 0.093 | 3.51 | -- | -- | -- | -- |
| 135.48 | 0.545 | 9 | -0.0788 | 1.57 | -- | -- | -- | 0.0877 | 3.55 | -- | -- | -- | -- |
| 258.22 | 0.748 | 8.98 | 0.179 | -- | 0.983 | -- | -- | 0.258 | -- | 92.65 | 147 | -- | -- |
| 117.31 | 0.507 | 9.05 | -- | 1.79 | -1.06 | -- | -- | -0.102 | 3.3 | 25.91 | 6 | -- | -- |
| 272.22 | 0.771 | 9.01 | -0.013 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 135.64 | 0.545 | 9 | -- | 1.56 | -- | -- | -- | 0.0964 | 3.55 | -- | -- | -- | -- |
| 259.01 | 0.75 | 8.98 | -- | -- | 0.924 | -- | -- | 0.232 | -- | 98.94 | 144 | -- | -- |
| 272.22 | 0.77 | 9.01 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 22 |
| 29 | 106.12 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 80 | 107.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 84 | 108.02 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 20 |
| 102 | 108.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 145 | 109.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 147 | 109.46 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 23 |
| 153 | 109.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 165 | 109.66 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 168 | 109.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 173 | 109.78 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 183 | 109.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 186 | 109.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 191 | 109.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 202 | 110.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 224 | 110.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 240 | 110.46 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 19 |
| 253 | 110.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 255 | 110.71 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 266 | 110.84 | temperature | 20 | 270 | > th | dose dependent | sin | 11 | NA |
| 271 | 110.88 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 273 | 110.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 286 | 110.98 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 12 |
| 289 | 110.99 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 318 | 111.20 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 338 | 111.40 | temperature | 20 | 90 | > th | dose dependent | sin | 9 | NA |
| 408 | 111.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 508 | 112.36 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 526 | 112.46 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 638 | 113.01 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 660 | 113.14 | radiation | 10 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 662 | 113.15 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 19 |
| 674 | 113.21 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 683 | 113.24 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 722 | 113.41 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 19 |
| 732 | 113.45 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 739 | 113.51 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 17 |
| 747 | 113.55 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 11 |
| 753 | 113.59 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 816 | 113.81 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 849 | 113.94 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 850 | 113.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 4 |
| 878 | 114.03 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 879 | 114.03 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 14 |
| 882 | 114.04 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 917 | 114.14 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 927 | 114.17 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 10 |
| 930 | 114.18 | temperature | 25 | 270 | < th | dose independent | sin | 13 | NA |
| 931 | 114.18 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 7 |