BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0736600 Os01g0736600|AK099546
(197 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0736600 Zinc finger, RING-type domain containing protein 254 2e-68
Os05g0526600 Zinc finger, RING-type domain containing protein 141 3e-34
Os02g0676500 Zinc finger, RING-type domain containing protein 87 1e-17
Os04g0450400 Zinc finger, RING-type domain containing protein 84 9e-17
AK109940 80 1e-15
Os02g0572350 Zinc finger, RING-type domain containing protein 79 1e-15
Os04g0571800 Zinc finger, RING-type domain containing protein 79 2e-15
Os10g0574400 Similar to RING finger family protein 79 2e-15
Os01g0755700 Zinc finger, RING-type domain containing protein 79 3e-15
Os12g0620300 77 6e-15
AK064102 77 9e-15
Os02g0686100 Similar to RING-H2 finger protein ATL1B 75 4e-14
Os11g0703200 74 5e-14
Os01g0213400 Zinc finger, RING-type domain containing protein 74 6e-14
Os08g0484200 Zinc finger, RING-type domain containing protein 72 3e-13
Os02g0820200 Zinc finger, RING-type domain containing protein 72 3e-13
Os03g0149800 Similar to RING-H2 finger protein ATL1D 71 4e-13
Os04g0590900 Similar to RING-H2 finger protein ATL1B 71 4e-13
Os05g0478000 Zinc finger, RING-type domain containing protein 71 5e-13
Os02g0832150 Zinc finger, RING-type domain containing protein 71 6e-13
Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1... 70 7e-13
Os11g0703300 70 1e-12
Os04g0419500 Zinc finger, RING-type domain containing protein 70 1e-12
Os03g0788100 Similar to RING-H2 finger protein ATL1P (RING-... 70 1e-12
Os08g0550400 Similar to RING-H2 finger protein ATL5P 69 2e-12
Os07g0159600 69 2e-12
Os02g0248900 69 3e-12
Os06g0695900 Zinc finger, RING-type domain containing protein 69 3e-12
Os12g0596200 Similar to RING-H2 protein 68 3e-12
Os01g0311100 68 4e-12
Os12g0620100 68 4e-12
Os02g0692000 Similar to RING finger family protein 68 4e-12
Os12g0115600 68 4e-12
Os06g0666500 Zinc finger, RING-type domain containing protein 68 5e-12
Os07g0159400 68 5e-12
Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1... 67 6e-12
Os02g0759400 Zinc finger, RING-type domain containing protein 67 8e-12
Os09g0468300 Zinc finger, RING-type domain containing protein 67 8e-12
Os01g0822800 Similar to RING-H2 finger protein ATL3C 67 8e-12
Os01g0830900 67 9e-12
Os11g0610600 Similar to RING-H2 finger protein ATL2N 67 1e-11
Os08g0563500 66 1e-11
Os01g0276600 Zinc finger, RING-type domain containing protein 66 2e-11
Os07g0479100 Zinc finger, RING-type domain containing protein 66 2e-11
Os02g0249200 66 2e-11
Os01g0213100 65 3e-11
Os03g0391100 65 4e-11
Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-... 65 4e-11
Os05g0360300 65 4e-11
Os08g0445000 Similar to RING-H2 finger protein ATL5A 64 5e-11
Os12g0432600 Zinc finger, RING-type domain containing protein 64 5e-11
Os06g0540400 Zinc finger, RING-type domain containing protein 64 5e-11
Os03g0398600 Zinc finger, RING-type domain containing protein 64 6e-11
Os01g0212700 Zinc finger, RING-type domain containing protein 64 6e-11
Os03g0149700 Zinc finger, RING-type domain containing protein 64 7e-11
Os06g0717600 Zinc finger, RING-type domain containing protein 64 8e-11
Os10g0544600 Fibrillarin family protein 64 1e-10
>Os01g0736600 Zinc finger, RING-type domain containing protein
Length = 197
Score = 254 bits (650), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/185 (72%), Positives = 134/185 (72%)
Query: 13 ATLGLGYSIAIXXXXXXXXXXXXXXSYFCFXXXXXXXHFSGVLTPXXXXXHLSITVPRVL 72
ATLGLGYSIAI SYFCF HFSGVLTP HLSITVPRVL
Sbjct: 13 ATLGLGYSIAIALGFLVLLASLLLASYFCFRRGGGGGHFSGVLTPSSSSSHLSITVPRVL 72
Query: 73 FVAEGSESPDXXXXXXXXXXXPVGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADG 132
FVAEGSESPD PVGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADG
Sbjct: 73 FVAEGSESPDAYSSGVAAASSPVGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADG 132
Query: 133 EMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSSXXXXXXXXXXXXXXSELVPLSQYAAD 192
EMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSS SELVPLSQYAAD
Sbjct: 133 EMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSSPIPTPVATPLATPLSELVPLSQYAAD 192
Query: 193 RRRSR 197
RRRSR
Sbjct: 193 RRRSR 197
>Os05g0526600 Zinc finger, RING-type domain containing protein
Length = 207
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 98/139 (70%), Gaps = 4/139 (2%)
Query: 63 HLSITVPRVLFVAEGSESPDXXXXXXXXXXX---PVGLDPAAIASYPKVPF-YSGAGADA 118
H+SITVPRV+FVA+ S+SP PVGLDPA IASYPKVPF + GADA
Sbjct: 69 HISITVPRVIFVADDSDSPGSSSRGGAGGGAASSPVGLDPAVIASYPKVPFSRAATGADA 128
Query: 119 DAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSSXXXXXXXXXXXX 178
+A CSICL EY +GEM R+MP+CRHRFH+ CLDAWLRR+ASCPVCRSS
Sbjct: 129 EAACSICLCEYKEGEMQRMMPECRHRFHLMCLDAWLRRSASCPVCRSSPIPTPVSTPLAT 188
Query: 179 XXSELVPLSQYAADRRRSR 197
SELVPLSQYAADRRR R
Sbjct: 189 PLSELVPLSQYAADRRRHR 207
>Os02g0676500 Zinc finger, RING-type domain containing protein
Length = 210
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 96 GLDPAAIASYPKVPF-YSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
GL+P +A+ P + + Y + DA CSICL EY + E+LR+MP CRH FH+ C+D WL
Sbjct: 82 GLEPFVVAAIPTMKYSYEAFQSKDDAQCSICLGEYNEKEILRIMPKCRHNFHLSCIDVWL 141
Query: 155 RRNASCPVCRSS 166
++ +CP+CR S
Sbjct: 142 QKQTTCPICRIS 153
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
VGLD AAI S + +GAG A CS+CL E+ DGE++R++P C H FHV C+D WL
Sbjct: 175 VGLDEAAIDSIAATRYRAGAGLLGAADCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWL 234
Query: 155 RRNASCPVCRS 165
R + +CP+CRS
Sbjct: 235 RAHVNCPLCRS 245
>AK109940
Length = 373
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
VGLD AAI S + +GAG C +CL E+ DGE+LR++P C H FHV C+DAWL
Sbjct: 130 VGLDEAAIESIALARYRAGAGMLGATDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWL 189
Query: 155 RRNASCPVCRS 165
R + +CP+CR+
Sbjct: 190 RAHVNCPLCRA 200
>Os02g0572350 Zinc finger, RING-type domain containing protein
Length = 325
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
VGLD AAI S + +GAG C +CL E+ DGE+LR++P C H FHV C+DAWL
Sbjct: 82 VGLDEAAIESIALARYRAGAGMLGATDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWL 141
Query: 155 RRNASCPVCRS 165
R + +CP+CR+
Sbjct: 142 RAHVNCPLCRA 152
>Os04g0571800 Zinc finger, RING-type domain containing protein
Length = 202
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 GLDPAAIASYPKVPFYSGA-GADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
GL+P A+A+ P + + A ++ D CSICLSEY + ++LR++P C H FH+ CLDAWL
Sbjct: 69 GLEPLAVAAIPTMKYNCEAFHSEDDTQCSICLSEYKEKDILRIVPICHHNFHLYCLDAWL 128
Query: 155 RRNASCPVCRSS 166
+ +CP+CR S
Sbjct: 129 LKQTTCPICRIS 140
>Os10g0574400 Similar to RING finger family protein
Length = 197
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 94 PVGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
P GLDPA +AS+P + F + A A C++CLS++A G+ LR++ CRH FH C+D+W
Sbjct: 98 PPGLDPAILASFPTLRFKASAAAPE---CAVCLSDFAAGDALRLLTVCRHAFHTPCIDSW 154
Query: 154 LRRNASCPVCRS 165
LR + +CPVCRS
Sbjct: 155 LRAHTTCPVCRS 166
>Os01g0755700 Zinc finger, RING-type domain containing protein
Length = 238
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADA---DAMCSICLSEYADGEMLRVMPDCRHRFHVCCLD 151
VGLDP+AIA+ P + AG DA C+ICL + + +RV+P CRH FHV C+D
Sbjct: 87 VGLDPSAIAALPTAAYGKVAGGDAAGGTTECAICLGAMQEADAVRVLPACRHVFHVACID 146
Query: 152 AWLRRNASCPVCRS 165
WL ++SCPVCR+
Sbjct: 147 KWLASSSSCPVCRA 160
>Os12g0620300
Length = 121
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
GLD AAI + PKV + G A A++ C++CL EY G+ LRV+ C H FH C+D WLR
Sbjct: 45 GLDEAAIKALPKVVY--GTAAAAESSCAVCLGEYGGGDELRVLSWCAHSFHRHCVDPWLR 102
Query: 156 RNASCPVCRSS 166
N +CPVCR+S
Sbjct: 103 LNPTCPVCRTS 113
>AK064102
Length = 357
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
VGLD A I S + +G G D C++CL E+ DGE++R++P C H FH C+D WL
Sbjct: 132 VGLDEATITSIATAEYRAGVGWGGD--CAVCLGEFRDGELVRLLPRCSHPFHAPCIDTWL 189
Query: 155 RRNASCPVCRS 165
R + +CP+CRS
Sbjct: 190 RAHVNCPLCRS 200
>Os02g0686100 Similar to RING-H2 finger protein ATL1B
Length = 189
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
G+ + S P V + S G C+ICL E+ DG+ +RV+P C HRFH C+D WLR
Sbjct: 74 GVKKEVLRSLPTVTYVSDGGGGEAEECAICLVEFEDGQAVRVLPQCDHRFHAACIDTWLR 133
Query: 156 RNASCPVCR 164
++SCP CR
Sbjct: 134 AHSSCPSCR 142
>Os11g0703200
Length = 170
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 111 YSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRS 165
Y A +AMC +CLSE+ DGE +RV+P+C H FHV C+ WLR N SCP+CR+
Sbjct: 90 YKKAEEWGEAMCPVCLSEFGDGEAVRVLPECMHYFHVDCIGTWLRANTSCPLCRA 144
>Os01g0213400 Zinc finger, RING-type domain containing protein
Length = 237
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 15/84 (17%)
Query: 96 GLDPAAIASYPKVPFYSGA--------------GADADAMCSICLSEYADGEMLRVMPDC 141
GLD +A+A+ P + GA A A C++CLSE ADGE +R +P+C
Sbjct: 90 GLDASALAALPVTAYRKNGGGGGGGEGSNRGGPGATA-ADCAVCLSELADGEKVRELPNC 148
Query: 142 RHRFHVCCLDAWLRRNASCPVCRS 165
RH FHV C+DAWLR +CP+CR+
Sbjct: 149 RHVFHVECVDAWLRSRTTCPLCRA 172
>Os08g0484200 Zinc finger, RING-type domain containing protein
Length = 413
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 96 GLDPAAIASYPKVPF------YSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCC 149
GLDPA + ++P + + +G GA C++CLSE+ D E LR++P C H FH C
Sbjct: 116 GLDPAVLGAFPTMAYADVKAHKAGKGA---LECAVCLSEFDDDETLRLLPRCSHAFHADC 172
Query: 150 LDAWLRRNASCPVCRSS 166
+DAWL + +CPVCR++
Sbjct: 173 IDAWLASHVTCPVCRAN 189
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 94 PVGLDPAAIASYPKVPFYSGAGADADA---MCSICLSEYADGEMLRVMPDCRHRFHVCCL 150
P GL+ AAI S P Y A D A C++C+SE+ + E +R++P C H FHV C+
Sbjct: 112 PRGLEEAAIQSLPAFR-YRKAIKDTTADSSECAVCISEFQEEERVRLLPSCLHVFHVDCI 170
Query: 151 DAWLRRNASCPVCRSS 166
D WL+ NA+CP+CR++
Sbjct: 171 DTWLQGNANCPLCRAA 186
>Os03g0149800 Similar to RING-H2 finger protein ATL1D
Length = 300
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADA--MCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
GLDP +A+ P V + A + + C++CLSE+ E L+++P C H FH+ C+D W
Sbjct: 94 GLDPDVVAALPVVKYRRAASGKSASPQECAVCLSEFVRDERLKLLPSCSHAFHIDCIDTW 153
Query: 154 LRRNASCPVCRS 165
L N SCP+CR+
Sbjct: 154 LHHNVSCPLCRT 165
>Os04g0590900 Similar to RING-H2 finger protein ATL1B
Length = 383
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 94 PVGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
P GLD I + G G CS+CL E++DGE LR++P C H FH C+D W
Sbjct: 129 PSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTW 188
Query: 154 LRRNASCPVCRSS 166
L+ +++CP+CR++
Sbjct: 189 LKSHSNCPLCRAN 201
>Os05g0478000 Zinc finger, RING-type domain containing protein
Length = 189
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 101 AIASYPKVPFYSGAGADADA-MCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNAS 159
A+ S P V Y G A+ +C+ICL E+ADGE +RV+P CRH FHV C+DAWL + S
Sbjct: 103 ALRSIP-VEVYCGGEETAETDVCAICLGEFADGEKVRVLPRCRHGFHVRCVDAWLVSHGS 161
Query: 160 CPVCR 164
CP CR
Sbjct: 162 CPTCR 166
>Os02g0832150 Zinc finger, RING-type domain containing protein
Length = 217
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
GL AI + P V F + A C+ICL+E+A GE LR++P C H FHV C+D WL
Sbjct: 107 GLKKKAIDALPTVSF-ALKQQQQQAECAICLAEFAGGEELRLLPHCGHAFHVSCIDTWLG 165
Query: 156 RNASCPVCRSS 166
+A+CP CR++
Sbjct: 166 THATCPSCRAT 176
>Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 349
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 96 GLDPAAIASYPKVPF------YSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCC 149
GLDPAA+A+ P VP+ SG G + C++CL+ + DG+ LR++P C H FH C
Sbjct: 93 GLDPAAVAAIPVVPYAEVRKHRSGGGGALE--CAVCLTVFDDGDDLRLLPQCSHAFHPDC 150
Query: 150 LDAWLRRNASCPVCRSS 166
+D WL + +CP+CR++
Sbjct: 151 IDPWLEGHVTCPLCRAN 167
>Os11g0703300
Length = 170
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 119 DAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSS 166
+ C +CLSE+ADGE++R++P+C H FH C+D WLR A+CP+CR++
Sbjct: 115 ETACPVCLSEFADGELIRLLPECMHYFHAACIDEWLRTRATCPLCRAA 162
>Os04g0419500 Zinc finger, RING-type domain containing protein
Length = 202
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 96 GLDPAAIASYPKVPFYSGAGADA-DAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
GL A+ S P + + +G + MC+ICLS++ DGE +RV+P C H FHV C+D WL
Sbjct: 89 GLRRKALRSMPILLYSTGLKLNTVSPMCAICLSDFEDGEHVRVLPKCNHGFHVRCIDRWL 148
Query: 155 RRNASCPVCRSS 166
++CP CR S
Sbjct: 149 LARSTCPTCRQS 160
>Os03g0788100 Similar to RING-H2 finger protein ATL1P (RING-H2 finger protein
ATL3)
Length = 208
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 95 VGLDPAAIASYPKVPF---------------YSGAGADADAMCSICLSEYADGEMLRVMP 139
+G+D A + YP+V + GA + CSICL Y DG++LR++P
Sbjct: 100 LGIDEATLKGYPEVVYGQPRKEAAKAASAAATKKGGATTCSCCSICLDNYGDGDVLRMLP 159
Query: 140 DCRHRFHVCCLDAWLRRNASCPVCR 164
+C H FH C+D WLR++ +CPVCR
Sbjct: 160 ECGHLFHRECVDPWLRQHPTCPVCR 184
>Os08g0550400 Similar to RING-H2 finger protein ATL5P
Length = 260
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
G+ AIA+ P F + AG D A CS+CL + DGE R +P+C H FH+ C+D+WL
Sbjct: 176 GMPADAIAALPVTTFAAAAGGDDRAGCSVCLQDLEDGERARRLPECGHTFHLRCIDSWLL 235
Query: 156 RNASCPVCRSS 166
R+ASCP+CR +
Sbjct: 236 RHASCPLCRRT 246
>Os07g0159600
Length = 182
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 95 VGLDPAAIASYPKVPF-----YSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCC 149
G+D A + ++P+V + G A C +CL Y DG++LR +PDC H FH C
Sbjct: 84 TGIDDATLEAFPEVVYGEARKARGGAAATQTCCPVCLENYGDGDVLRALPDCGHLFHREC 143
Query: 150 LDAWLRRNASCPVCRSS 166
+D WLR+ +CPVCR+S
Sbjct: 144 VDPWLRQRPTCPVCRTS 160
>Os02g0248900
Length = 195
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
GL AAI + P + G D CS+CL + GE +R +P C H +H C+DAWLR
Sbjct: 95 GLTAAAIDALPASEYERPRGGGGDPACSVCLEDVRGGETVRWLPACGHLYHAACIDAWLR 154
Query: 156 RNASCPVCRS 165
+CP+CRS
Sbjct: 155 SRTTCPLCRS 164
>Os06g0695900 Zinc finger, RING-type domain containing protein
Length = 398
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
G+D A + S P F + G A C++CL + E LR++P CRH FHV C+D WL
Sbjct: 91 GVDRAVVESLPVFRFGALRGQKAGLECAVCLGRFEPTEALRLLPKCRHGFHVECVDTWLD 150
Query: 156 RNASCPVCRS 165
+++CP+CRS
Sbjct: 151 AHSTCPLCRS 160
>Os12g0596200 Similar to RING-H2 protein
Length = 310
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Query: 94 PVGLDPAAIASYPKVPFYSGAGADADAM------------CSICLSEYADGEMLRVMPDC 141
P GLD AAI S P + + A C++CL E+ADG+ LR +P C
Sbjct: 64 PYGLDDAAIKSLPSAQYLKSSAMAARGGGGGGGADTAARDCAVCLLEFADGDELRALPLC 123
Query: 142 RHRFHVCCLDAWLRRNASCPVCRSS 166
H FH C+D WLR +ASCP+CR++
Sbjct: 124 AHAFHADCIDVWLRAHASCPLCRAA 148
>Os01g0311100
Length = 249
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 94 PVGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
P GLDPA + + P V + A D C++CL+E+ G+ R +P C HRFHV C+DAW
Sbjct: 121 PRGLDPAVLRALPVVVVAAAGAAPGD--CAVCLAEFEAGDKARALPRCGHRFHVECIDAW 178
Query: 154 LRRNASCPVCRS 165
R N++CP+CR+
Sbjct: 179 FRENSTCPLCRA 190
>Os12g0620100
Length = 153
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAM--------------CSICLSEYADGEMLRVMPDC 141
GLD A +A YP + + + A C++CL+EY DG+ LR +P C
Sbjct: 52 GLDEAVLAEYPTTVYSCSSSSAAVPEEAAAAAVDAGDGTGCAVCLAEYEDGDELRRLPGC 111
Query: 142 RHRFHVCCLDAWLRRNASCPVCRSS 166
H FH C+D WLRR +CPVCRSS
Sbjct: 112 GHAFHRRCVDEWLRRRPTCPVCRSS 136
>Os02g0692000 Similar to RING finger family protein
Length = 389
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
G+D I + G G CS+CL E+ +GE LR++P C H FHV C+D WL+
Sbjct: 138 GMDETLINKITVCKYRRGDGFVDSTDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLK 197
Query: 156 RNASCPVCR 164
+++CP+CR
Sbjct: 198 SHSNCPLCR 206
>Os12g0115600
Length = 170
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 119 DAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSS 166
DA C+ICL ++ADG+ +RV+P C H FHV C+D WL + SCP CR S
Sbjct: 110 DAECAICLGDFADGDKVRVLPRCHHGFHVGCIDTWLAAHTSCPTCRDS 157
>Os06g0666500 Zinc finger, RING-type domain containing protein
Length = 181
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
GL + + P V Y + A + A C+ICLS++ADGE +R++P C HRFHV C+D WL
Sbjct: 86 GLKREDVVALP-VATYVASPAPSVAGCAICLSDFADGERVRLLPACGHRFHVVCIDRWLL 144
Query: 156 RNASCPVCR 164
+ SCP CR
Sbjct: 145 AHCSCPTCR 153
>Os07g0159400
Length = 177
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
VG+D A + + P V + G A C++CL Y G++LR +P+C H FH C+ WL
Sbjct: 79 VGIDEATLQALPLVLY--GEARTAQTSCAVCLESYGGGDVLRALPECGHLFHRDCIFTWL 136
Query: 155 RRNASCPVCR 164
RR +CPVCR
Sbjct: 137 RRRPTCPVCR 146
>Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 385
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
G+ I S P F + GA C++CL+ + D ++LR++P CRH FH+ C+D WL
Sbjct: 98 GVAKPVIESLPFFRFAALRGARQGLECAVCLARFDDADLLRLLPRCRHAFHLDCVDRWLE 157
Query: 156 RNASCPVCRS 165
ASCP+CR+
Sbjct: 158 SKASCPLCRA 167
>Os02g0759400 Zinc finger, RING-type domain containing protein
Length = 437
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 94 PVGLDPAAIASYPKVPFYS------GAGADADAMCSICLSEYADGEMLRVMPDCRHRFHV 147
P GLD + + +P + + G A A C++CLSE+ D EMLR +P C H FH
Sbjct: 116 PRGLDSSVVRMFPTMKYAEAKALRVGKVAGAALECAVCLSEFEDDEMLRFLPKCSHAFHP 175
Query: 148 CCLDAWLRRNASCPVCRSS 166
C+ WL + +CPVCR +
Sbjct: 176 DCIGQWLASHVTCPVCRRN 194
>Os09g0468300 Zinc finger, RING-type domain containing protein
Length = 392
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 96 GLDPAAIASYPKVPF---YSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDA 152
GLD + +A++P + + + C++C+SE+ D E LR++P C H FH C+D
Sbjct: 96 GLDQSVLATFPTMAYADVKAHKSVKGALECAVCISEFDDDETLRLLPKCSHVFHQDCIDT 155
Query: 153 WLRRNASCPVCRSS 166
WL +A+CPVCR++
Sbjct: 156 WLASHATCPVCRAN 169
>Os01g0822800 Similar to RING-H2 finger protein ATL3C
Length = 208
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 116 ADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSS 166
A A +C+ICL E+ADGE +RV+P C H FHV C+D WL + SCP CR S
Sbjct: 118 AAAAEVCAICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHDSCPTCRGS 168
>Os01g0830900
Length = 189
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 67 TVPRVLFVAEGSESPDXXXXXXXXXXXPVGLDPAAIASYPKVPFYSGAGADADA------ 120
T P + G S GLD A IAS P + + A A D
Sbjct: 66 TTPMPATTSSGFSSSHAAATAPGSASSVTGLDDATIASMPVALYRAVASAAGDGDDGGAA 125
Query: 121 MCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRSS 166
CSICL E+ +GE ++ +P C H FH C+DAWLR SCP+CRSS
Sbjct: 126 QCSICLGEFEEGEKVKALPLCGHGFHPECVDAWLRSRPSCPLCRSS 171
>Os11g0610600 Similar to RING-H2 finger protein ATL2N
Length = 405
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 122 CSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRS 165
C++CL+E+ DGE LR++P CRH FH C+D WLR + +CP+CR+
Sbjct: 222 CAVCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVNCPLCRA 265
>Os08g0563500
Length = 241
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 95 VGLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
+GL+ AAI P + + + C +CL E+ +GE LR +P C H FH+ C+DAWL
Sbjct: 69 LGLEEAAIRRIPTLRYQQQQQHNKQQQCGVCLGEFREGERLRRLPPCLHSFHIDCIDAWL 128
Query: 155 RRNASCPVCRS 165
+CP+CR+
Sbjct: 129 ATALTCPLCRA 139
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 101 AIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASC 160
A+ S P V AG D D+ C++CL +YA GE MP CRHRFH C+ WL+ ++SC
Sbjct: 194 AVESMPTVEV--AAGGDCDSACAVCLEDYAAGERATEMP-CRHRFHAKCIVPWLKMHSSC 250
Query: 161 PVCR 164
PVCR
Sbjct: 251 PVCR 254
>Os07g0479100 Zinc finger, RING-type domain containing protein
Length = 249
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 96 GLDPAAIASYPKVPFYSGAGAD--ADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
G+ I PK F + D D C++CL ++ + +RV+P C+H FH C+D W
Sbjct: 169 GMSRDLINRIPKTTFSAATNPDQETDNCCAVCLQDFGASQFVRVLPHCQHTFHARCIDNW 228
Query: 154 LRRNASCPVCRS 165
L R+ASCP+CR+
Sbjct: 229 LFRHASCPLCRA 240
>Os02g0249200
Length = 166
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 96 GLDPAAIASYPKVPFYSGAGADAD--AMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
GL P+A+A+ PK + GA A C+ICL DGE +R +P+C+H FHV C+D W
Sbjct: 82 GLAPSALAAIPKFAYRRGAAGGGGGWAQCAICLGVVRDGEAVRRLPECKHLFHVECVDMW 141
Query: 154 LRRNASCPVCR 164
L +A+CP+CR
Sbjct: 142 LYSHATCPLCR 152
>Os01g0213100
Length = 231
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAM-CSICLSEYADGEMLRVMPDCRHRFHVCCLDAWL 154
GL AIA+ PK Y G G + D CSICL ADGE+ R +P C H FH C+D WL
Sbjct: 117 GLGEDAIAALPKFE-YRGTGDECDRWECSICLCAVADGEVARQLPRCMHLFHRGCVDMWL 175
Query: 155 RRNASCPVCRSS 166
+ +CPVCR+
Sbjct: 176 VAHTTCPVCRAE 187
>Os03g0391100
Length = 417
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADA---MCSICLSEYADG-EMLRVMPDCRHRFHVCCLD 151
GLD AA+ + P + + + A C++CL+E+ADG E LR++P C H FH C+D
Sbjct: 123 GLDVAAMEALPVLTYATARAVKAGRGALECAVCLAEFADGGEKLRLLPGCCHVFHAACID 182
Query: 152 AWLRRNASCPVCRS 165
WL + +CPVCR+
Sbjct: 183 VWLAAHVTCPVCRA 196
>Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAM--CSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
GL AA+ + P + A A + C++CLSE ADGE +R++P C H FHV C+D W
Sbjct: 84 GLPAAALRALPVTVYAKPAAARGEEALECAVCLSEVADGEKVRMLPKCDHGFHVECIDMW 143
Query: 154 LRRNASCPVCRS 165
+ +CP+CR+
Sbjct: 144 FHSHDTCPLCRA 155
>Os05g0360300
Length = 199
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 102 IASYPKVPFYSGA---GADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNA 158
IAS V YS A A A C++C+ E+ DG++ R++P C HRFH C+ AWLR ++
Sbjct: 102 IASSLPVSVYSSADVGNGKAAAECAVCIVEFRDGDLARLLPRCGHRFHADCVGAWLRLHS 161
Query: 159 SCPVCRSS 166
+CP+CR++
Sbjct: 162 TCPLCRAA 169
>Os08g0445000 Similar to RING-H2 finger protein ATL5A
Length = 501
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 96 GLDPAAIASYPKVPFYS--GAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAW 153
G+D + I + P + + GAG C++CL E+AD + LR++P C H FHV C+D W
Sbjct: 125 GVDQSFIDTLPVFLYGAVVGAGRKDPFDCAVCLCEFADDDRLRLLPKCSHAFHVDCIDTW 184
Query: 154 LRRNASCPVCRSS 166
L +++CP+CR S
Sbjct: 185 LLSHSTCPLCRRS 197
>Os12g0432600 Zinc finger, RING-type domain containing protein
Length = 185
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
GL I + P + G+ A C++C++ DG+ +R +P C H FH C+D WLR
Sbjct: 97 GLSQEDIEAIPAFEYRRGSSGSGVAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVDGWLR 156
Query: 156 RNASCPVCRS 165
+A+CP+CR+
Sbjct: 157 DHATCPMCRA 166
>Os06g0540400 Zinc finger, RING-type domain containing protein
Length = 168
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 107 KVPFY----SGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPV 162
K+P + S +G + A CS+CL GEM+R +P C+H +HV C+D WL +A+CP+
Sbjct: 85 KIPEFAYTGSASGGEGAAQCSVCLGAVRGGEMVRRLPACKHLYHVECIDMWLASHATCPL 144
Query: 163 CRSS 166
CR+
Sbjct: 145 CRTE 148
>Os03g0398600 Zinc finger, RING-type domain containing protein
Length = 267
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 97 LDPAAIASYPKVPFYSGAGADAD----AMCSICLSEYADGEMLRVMPDCRHRFHVCCLDA 152
LD AAIA+ P + A A C++C++E A GE RV+P C H FHV C+D
Sbjct: 62 LDEAAIAALPTKVVAAAAEGGDGGDPAADCAVCITELAAGESARVLPRCGHGFHVECVDM 121
Query: 153 WLRRNASCPVCR 164
WLR N++CP+CR
Sbjct: 122 WLRSNSTCPLCR 133
>Os01g0212700 Zinc finger, RING-type domain containing protein
Length = 185
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 96 GLDPAAIASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLR 155
G+ AAIA+ P + + A A A C++CL + GE +R +P C H FH C+DAWLR
Sbjct: 73 GMSAAAIAALPTFGYEASAAAAAALDCAVCLGQVDAGEKVRQLPKCGHLFHAECVDAWLR 132
Query: 156 RNASCPVCRSS 166
+++CP+CR++
Sbjct: 133 AHSTCPMCRAA 143
>Os03g0149700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 122 CSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCRS 165
C++CLSE+ + E +R++P+C H FH+ C+D WL+ NA CP CRS
Sbjct: 128 CAVCLSEFVERERVRLLPNCSHAFHIDCIDTWLQGNARCPFCRS 171
>Os06g0717600 Zinc finger, RING-type domain containing protein
Length = 232
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 96 GLDPAAIASYPKV----PFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHVCCLD 151
G+ A+I P+V + A D CS+CL ++ GE +R +PDC H FHV C+D
Sbjct: 158 GMPRASIDKLPEVRITEEYRRNAIGDLSG-CSVCLQDFQTGEKVRSLPDCWHVFHVPCID 216
Query: 152 AWLRRNASCPVCR 164
WL ++ SCP+CR
Sbjct: 217 GWLIKHGSCPLCR 229
>Os10g0544600 Fibrillarin family protein
Length = 233
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 122 CSICLSEYADGEMLRVMPDCRHRFHVCCLDAWLRRNASCPVCR 164
CS+CL ++ GEM R +P CRH FHV C+D WL R+ SCP+CR
Sbjct: 188 CSVCLQDFRVGEMARRLPSCRHVFHVPCIDCWLVRHGSCPLCR 230
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.138 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,653,304
Number of extensions: 161195
Number of successful extensions: 785
Number of sequences better than 1.0e-10: 88
Number of HSP's gapped: 823
Number of HSP's successfully gapped: 88
Length of query: 197
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 101
Effective length of database: 12,023,257
Effective search space: 1214348957
Effective search space used: 1214348957
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 153 (63.5 bits)