Os02g0759400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0759400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.47 | 0.76 | 7.63 | -0.136 | 2.09 | 1.61 | -0.554 | 2.06 | -0.259 | 7.44 | 7.263 | 4077 | -- | -- |
| 262.96 | 0.755 | 7.59 | -0.191 | 2.09 | 1.24 | -0.542 | -- | -0.245 | 7.41 | 7.311 | 4142 | -- | -- |
| 262.31 | 0.754 | 7.63 | -0.15 | 2.09 | 1.64 | -- | 2.21 | -0.26 | 7.43 | 7.273 | 4076 | -- | -- |
| 263.79 | 0.756 | 7.59 | -0.208 | 2.09 | 1.25 | -- | -- | -0.243 | 7.43 | 7.368 | 4112 | -- | -- |
| 483.58 | 1.02 | 7.7 | -0.00672 | -- | 1.94 | -- | 2.28 | -0.295 | -- | 8 | 4195 | -- | -- |
| 294.08 | 0.804 | 7.61 | -0.585 | 2.16 | -- | -0.67 | -- | -0.343 | 7.39 | -- | -- | -- | -- |
| 295.31 | 0.805 | 7.61 | -0.6 | 2.16 | -- | -- | -- | -0.341 | 7.4 | -- | -- | -- | -- |
| 488.86 | 1.03 | 7.69 | -0.117 | -- | 1.58 | -- | -- | -0.312 | -- | 8.123 | 4195 | -- | -- |
| 264.81 | 0.758 | 7.59 | -- | 2.09 | 1.34 | -- | -- | -0.237 | 7.46 | 7.372 | 4103 | -- | -- |
| 544.41 | 1.09 | 7.66 | -0.565 | -- | -- | -- | -- | -0.306 | -- | -- | -- | -- | -- |
| 304.81 | 0.817 | 7.6 | -- | 2.16 | -- | -- | -- | -0.275 | 7.42 | -- | -- | -- | -- |
| 488.79 | 1.03 | 7.68 | -- | -- | 1.6 | -- | -- | -0.252 | -- | 8.101 | 4194 | -- | -- |
| 552.84 | 1.1 | 7.65 | -- | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.44 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 2 | 246.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 4 | 247.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 7 | 248.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 17 | 1 |
| 16 | 249.74 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 20 | 250.14 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 21 | NA |
| 21 | 250.16 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 22 | 250.16 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 23 | 250.31 | precipitation | 0.1 | 10 | > th | dose independent | sin | 21 | NA |
| 26 | 250.46 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 29 | 250.80 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 30 | 251.05 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 33 | 251.20 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 47 | 251.81 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 49 | 251.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 50 | 252.00 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 5 |
| 60 | 252.00 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 5 |
| 118 | 252.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 3 |
| 138 | 252.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 165 | 252.96 | wind | 5.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 190 | 253.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 201 | 253.68 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 203 | 253.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 217 | 254.23 | wind | 5.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 221 | 254.35 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 226 | 254.49 | radiation | 1.0 | 270 | < th | dose independent | sin | 0 | NA |
| 229 | 254.60 | wind | 7.0 | 90 | < th | dose dependent | rect. | 14 | 14 |
| 231 | 254.62 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 237 | 254.76 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 240 | 254.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 245 | 254.91 | wind | 9.0 | 10 | < th | dose dependent | rect. | 22 | 7 |
| 249 | 254.97 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 252 | 255.00 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 283 | 255.43 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 289 | 255.60 | wind | 9.0 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 291 | 255.65 | wind | 9.0 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 295 | 255.69 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 315 | 255.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 316 | 255.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 324 | 256.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 331 | 256.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 344 | 256.44 | wind | 1.0 | 270 | > th | dose dependent | rect. | 14 | 9 |
| 352 | 256.52 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 7 |
| 354 | 256.55 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 11 | 18 |
| 360 | 256.60 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 361 | 256.61 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 5 |
| 371 | 256.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 374 | 256.76 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 382 | 256.93 | wind | 5.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 399 | 257.20 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 402 | 257.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 415 | 257.32 | temperature | 25.0 | 90 | < th | dose independent | rect. | 17 | 4 |
| 419 | 257.37 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 15 |
| 423 | 257.43 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 424 | 257.45 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 23 | 6 |
| 425 | 257.45 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 438 | 257.52 | wind | 7.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 442 | 257.56 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 449 | 257.64 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 450 | 257.65 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 451 | 257.66 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 473 | 257.89 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 13 |
| 475 | 257.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 488 | 258.00 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 7 |
| 502 | 258.08 | wind | 5.0 | 270 | > th | dose independent | rect. | 17 | 1 |
| 505 | 258.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 506 | 258.14 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 507 | 258.15 | precipitation | 0.1 | 10 | < th | dose independent | sin | 22 | NA |
| 508 | 258.15 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 22 | NA |
| 524 | 258.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 549 | 258.42 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 556 | 258.45 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 7 |
| 573 | 258.57 | wind | 5.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 579 | 258.61 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 12 |
| 601 | 258.77 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 9 |
| 613 | 258.87 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 614 | 258.87 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 615 | 258.87 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 618 | 258.87 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 624 | 258.87 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 626 | 258.87 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 631 | 258.87 | wind | 3.0 | 270 | > th | dose dependent | rect. | 15 | 13 |
| 639 | 258.91 | wind | 5.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 642 | 258.92 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 645 | 258.93 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 13 |
| 661 | 259.04 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 677 | 259.11 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 705 | 259.11 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 734 | 259.12 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 5 |
| 737 | 259.14 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 742 | 259.15 | radiation | 1.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 745 | 259.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 9 |
| 746 | 259.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 774 | 259.21 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 791 | 259.28 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 792 | 259.29 | temperature | 25.0 | 10 | < th | dose independent | rect. | 16 | 6 |
| 794 | 259.30 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 805 | 259.37 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 807 | 259.39 | wind | 1.0 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 812 | 259.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 815 | 259.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 816 | 259.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 831 | 259.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 7 |
| 832 | 259.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 904 | 259.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 17 |
| 905 | 259.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 17 |
| 990 | 260.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 17 |