Os10g0544600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Fibrillarin family protein.
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Os10g0544600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Fibrillarin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 286.08 | 0.795 | 8.25 | -0.0318 | 0.846 | 2.27 | -1.24 | 0.378 | 0.557 | 2.41 | 21.02 | 7 | -- | -- |
| 286.32 | 0.788 | 8.25 | -0.0467 | 0.837 | 2.29 | -0.867 | -- | 0.552 | 2.47 | 21.06 | 5 | -- | -- |
| 288.23 | 0.791 | 8.24 | -0.0225 | 0.852 | 2.27 | -- | -0.34 | 0.568 | 2.26 | 21.19 | 5 | -- | -- |
| 288.91 | 0.792 | 8.25 | -0.0252 | 0.888 | 2.23 | -- | -- | 0.558 | 2.16 | 21.11 | 5 | -- | -- |
| 307.82 | 0.817 | 8.24 | -0.0139 | -- | 2.79 | -- | -0.388 | 0.567 | -- | 20.54 | 5 | -- | -- |
| 378.99 | 0.913 | 8.29 | -0.101 | 3.02 | -- | -0.32 | -- | 0.55 | 0.583 | -- | -- | -- | -- |
| 379.43 | 0.912 | 8.29 | -0.0883 | 3.02 | -- | -- | -- | 0.552 | 0.575 | -- | -- | -- | -- |
| 308.62 | 0.818 | 8.24 | 0.00147 | -- | 2.78 | -- | -- | 0.57 | -- | 20.39 | 5 | -- | -- |
| 288.93 | 0.792 | 8.24 | -- | 0.887 | 2.23 | -- | -- | 0.56 | 2.16 | 21.14 | 5 | -- | -- |
| 951.59 | 1.44 | 8.23 | 0.0177 | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
| 379.64 | 0.911 | 8.29 | -- | 3.02 | -- | -- | -- | 0.562 | 0.574 | -- | -- | -- | -- |
| 308.62 | 0.818 | 8.24 | -- | -- | 2.78 | -- | -- | 0.57 | -- | 20.39 | 5 | -- | -- |
| 951.6 | 1.44 | 8.23 | -- | -- | -- | -- | -- | 0.602 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 284.15 | radiation | 10.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 3 | 287.08 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 4 | 288.05 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 6 | 288.94 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 9 | 289.07 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 10 | 289.22 | radiation | 10.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 11 | 289.41 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 13 | 289.78 | radiation | 20.0 | 10 | < th | dose dependent | no | NA | NA |
| 14 | 290.10 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 15 | 290.24 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 25 | 291.70 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 28 | 292.41 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 41 | 294.56 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 50 | 296.08 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 62 | 296.70 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 109 | 300.48 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 120 | 301.29 | radiation | 10.0 | 10 | < th | dose independent | sin | 22 | NA |
| 227 | 305.33 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 232 | 305.49 | radiation | 10.0 | 10 | > th | dose independent | sin | 23 | NA |
| 245 | 305.80 | radiation | 10.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 269 | 306.80 | radiation | 10.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 275 | 306.93 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 8 |
| 289 | 307.34 | radiation | 10.0 | 10 | < th | dose independent | rect. | 13 | 22 |
| 331 | 308.60 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 373 | 309.55 | radiation | 20.0 | 90 | < th | dose independent | rect. | 11 | 9 |
| 397 | 309.74 | radiation | 10.0 | 10 | > th | dose independent | rect. | 7 | 9 |
| 410 | 310.05 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 440 | 310.35 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 449 | 310.48 | radiation | 10.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 452 | 310.58 | radiation | 10.0 | 10 | < th | dose independent | no | NA | NA |
| 467 | 310.94 | radiation | 10.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 525 | 311.44 | radiation | 10.0 | 10 | > th | dose independent | no | NA | NA |
| 612 | 311.64 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 620 | 311.79 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 627 | 311.85 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 653 | 312.22 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 690 | 312.61 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 735 | 313.41 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 17 |
| 743 | 313.57 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 788 | 314.33 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 790 | 314.36 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 806 | 314.62 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 815 | 314.72 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 9 |
| 826 | 314.87 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 828 | 314.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 859 | 315.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 19 |
| 860 | 315.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 866 | 315.27 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 17 |
| 887 | 315.70 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 889 | 315.77 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 12 |
| 903 | 315.79 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 923 | 315.95 | radiation | 1.0 | 10 | > th | dose dependent | no | NA | NA |
| 981 | 315.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 5 |