Os02g0559800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : E3 ubiquitin ligase EL5 (EC 6.3.2.-).
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Os02g0559800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : E3 ubiquitin ligase EL5 (EC 6.3.2.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 663.86 | 1.21 | 8.91 | 3.73 | 1.76 | 7.29 | -0.112 | 8.09 | 1.13 | 18.4 | 5.862 | 73 | 5.29 | -- |
| 666.91 | 1.2 | 8.91 | 3.72 | 1.73 | 5.71 | -0.38 | -- | 1.1 | 18.3 | 5.795 | 72 | 5.1 | -- |
| 663.74 | 1.2 | 8.91 | 3.74 | 1.75 | 7.41 | -- | 8.74 | 1.12 | 18.4 | 5.917 | 72 | 5.47 | -- |
| 665.72 | 1.2 | 8.89 | 3.71 | 1.77 | 5.88 | -- | -- | 1.13 | 18.4 | 5.902 | 72 | 5.09 | -- |
| 771 | 1.29 | 8.9 | 4.04 | -- | 5.98 | -- | 6.98 | 1.01 | -- | 4.112 | 58 | 8.75 | -- |
| 737.21 | 1.27 | 8.92 | 3.39 | 2.01 | -- | -0.672 | -- | 1.04 | 18.5 | -- | -- | -- | -- |
| 738.32 | 1.27 | 8.92 | 3.4 | 2.01 | -- | -- | -- | 1.03 | 18.5 | -- | -- | -- | -- |
| 737.11 | 1.26 | 8.83 | 4.35 | -- | 3.61 | -- | -- | 0.866 | -- | 1.135 | 68 | 10.7 | -- |
| 1011.12 | 1.48 | 8.99 | -- | 1.81 | 3.56 | -- | -- | 0.682 | 18.5 | 6 | 49 | 5.52 | -- |
| 948.69 | 1.44 | 8.88 | 3.35 | -- | -- | -- | -- | 0.992 | -- | -- | -- | -- | -- |
| 1042.24 | 1.51 | 9 | -- | 1.97 | -- | -- | -- | 0.656 | 18.6 | -- | -- | -- | -- |
| 1045.92 | 1.51 | 9.01 | -- | -- | 2.31 | -- | -- | 0.472 | -- | -15.02 | 70 | 11.8 | -- |
| 1243.94 | 1.65 | 8.96 | -- | -- | -- | -- | -- | 0.621 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 665.87 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 11 |
| 2 | 665.96 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 15 |
| 6 | 667.35 | wind | 7 | 90 | < th | dose independent | sin | 11 | NA |
| 9 | 668.11 | wind | 7 | 90 | > th | dose independent | sin | 12 | NA |
| 14 | 671.40 | wind | 5 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 15 | 671.78 | wind | 7 | 90 | > th | dose dependent | sin | 11 | NA |
| 21 | 673.96 | wind | 5 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 67 | 680.33 | wind | 7 | 270 | > th | dose independent | rect. | 14 | 12 |
| 96 | 681.80 | wind | 7 | 270 | > th | dose independent | rect. | 14 | 21 |
| 97 | 681.84 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 6 |
| 160 | 684.89 | wind | 7 | 270 | > th | dose dependent | rect. | 15 | 20 |
| 249 | 688.03 | wind | 5 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 281 | 688.67 | wind | 1 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 288 | 688.91 | wind | 5 | 90 | > th | dose dependent | rect. | 11 | 21 |
| 307 | 689.15 | wind | 7 | 90 | > th | dose independent | rect. | 19 | 9 |
| 308 | 689.19 | wind | 1 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 316 | 689.28 | wind | 7 | 90 | > th | dose independent | rect. | 19 | 13 |
| 350 | 689.93 | wind | 1 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 393 | 690.69 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 17 |
| 414 | 691.09 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 433 | 691.44 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 457 | 691.88 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 9 |
| 498 | 692.47 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 2 |
| 521 | 692.74 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 3 |
| 525 | 692.82 | humidity | 60 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 546 | 693.04 | wind | 1 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 567 | 693.38 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 570 | 693.41 | wind | 3 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 571 | 693.42 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 615 | 693.87 | humidity | 60 | 720 | < th | dose independent | rect. | 14 | 20 |
| 616 | 693.90 | wind | 7 | 10 | > th | dose independent | rect. | 20 | 8 |
| 650 | 694.29 | wind | 1 | 4320 | < th | dose dependent | rect. | 7 | 4 |
| 674 | 694.55 | wind | 3 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 699 | 694.90 | wind | 7 | 90 | > th | dose independent | rect. | 21 | 7 |
| 705 | 695.01 | temperature | 25 | 10 | < th | dose independent | rect. | 12 | 8 |
| 746 | 695.30 | radiation | 10 | 720 | < th | dose independent | rect. | 11 | 7 |
| 759 | 695.46 | humidity | 60 | 720 | < th | dose independent | rect. | 15 | 3 |
| 760 | 695.46 | humidity | 60 | 720 | < th | dose dependent | rect. | 13 | 21 |
| 784 | 695.71 | wind | 1 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 808 | 695.87 | wind | 7 | 90 | > th | dose dependent | rect. | 21 | 11 |
| 820 | 696.01 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 846 | 696.16 | wind | 7 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 869 | 696.26 | wind | 7 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 939 | 696.69 | humidity | 60 | 720 | > th | dose independent | sin | 14 | NA |
| 948 | 696.76 | wind | 5 | 30 | < th | dose independent | rect. | 8 | 23 |
| 949 | 696.77 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 13 |
| 969 | 696.81 | radiation | 10 | 720 | < th | dose independent | rect. | 11 | 15 |
| 996 | 696.92 | humidity | 60 | 720 | > th | dose independent | rect. | 20 | 22 |