BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0312600 Os02g0312600|AF376055
(197 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0312600 Similar to Small GTP-binding protein (Fragment) 395 e-110
AK100585 338 1e-93
Os02g0120800 Similar to Small GTP-binding protein (Fragment) 337 3e-93
Os02g0834000 Similar to Rop4 small GTP binding protein 337 4e-93
Os02g0742200 Small GTP-binding protein OsRac3 325 1e-89
Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 ... 323 7e-89
Os05g0513800 Small GTP-binding protein OsRac2 309 7e-85
Os01g0229400 Small GTP-binding protein OsRac1 303 8e-83
AK107382 182 2e-46
Os05g0461300 Similar to RAB8C 101 3e-22
Os03g0819900 Similar to RAB8C 101 4e-22
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 100 5e-22
Os03g0843100 Ras GTPase family protein 94 5e-20
AK062838 94 6e-20
Os04g0470100 Similar to Small GTP binding protein Rab2 94 8e-20
Os11g0303400 Similar to Small GTP-binding protein OsRac2 93 1e-19
Os01g0558600 Ras-related protein RIC1 92 2e-19
Os03g0823700 Similar to Ras-related protein Rab11C 91 5e-19
Os01g0750000 Similar to Ras-related protein RIC2 91 5e-19
Os03g0151900 Similar to Small GTP-binding protein 91 5e-19
Os06g0551400 Ras-related protein RIC2 91 7e-19
AF327517 91 7e-19
Os10g0441800 Similar to RAB5B 90 1e-18
Os07g0496000 Similar to Nt-rab6 protein 89 2e-18
Os05g0280200 Similar to Ras-related protein Rab11A 88 4e-18
AK060839 88 4e-18
Os01g0848700 Similar to Ras-related protein Rab11C 87 6e-18
AK060246 87 6e-18
Os02g0653800 Similar to GTP-binding protein 87 6e-18
Os05g0516800 Similar to Ras-related protein RIC2 87 6e-18
Os01g0179700 Similar to GTP-binding protein YPTM2 87 7e-18
Os09g0327100 Similar to GTP-binding protein 85 3e-17
Os07g0195100 Similar to Ras-related protein ARA-3 85 3e-17
Os01g0714900 Similar to RAB7A 84 7e-17
Os05g0105100 Similar to Small GTPase rab11-related 84 8e-17
Os03g0146000 Similar to RAB1X 84 9e-17
Os10g0377400 Similar to Ras-related protein Rab11D 83 1e-16
Os12g0631100 Ras small GTPase, Ras type family protein 83 1e-16
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 83 1e-16
Os10g0456600 Ras GTPase family protein 82 3e-16
Os05g0564400 Similar to GTP-binding protein 80 7e-16
Os05g0341600 Similar to Ras-related protein Rab-21 80 1e-15
Os05g0536900 Similar to RAB7A 80 1e-15
Os01g0667600 Similar to GTP-binding protein 80 1e-15
Os03g0666500 Similar to Ras-related protein RHA1 79 2e-15
Os06g0714600 Ras GTPase family protein 78 4e-15
Os10g0208000 78 5e-15
Os05g0516600 Small GTP binding protein 77 1e-14
Os08g0525000 Ras GTPase family protein 76 2e-14
Os01g0227300 Similar to RAB7D 74 6e-14
Os09g0527600 Similar to GTP-binding protein (Fragment) 74 7e-14
AK107227 74 7e-14
Os03g0810600 Ras GTPase family protein 73 1e-13
Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (... 67 7e-12
Os01g0611100 Similar to GTP-binding nuclear protein Ran-2 67 8e-12
AK104720 65 2e-11
Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (... 64 6e-11
>Os02g0312600 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/197 (96%), Positives = 190/197 (96%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL 120
Query: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCX 180
DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLC
Sbjct: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCP 180
Query: 181 XXXXXXNTRKQRSCWIL 197
NTRKQRSCWIL
Sbjct: 181 PKPKKKNTRKQRSCWIL 197
>AK100585
Length = 197
Score = 338 bits (867), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 161/197 (81%), Positives = 175/197 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYEN+ KKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCX 180
DLR+DKQFF+DHPG+ PI+TAQGEEL++ IGA YIECSSKTQ NVK VFD+AIKVVL
Sbjct: 121 DLRDDKQFFVDHPGVVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQP 180
Query: 181 XXXXXXNTRKQRSCWIL 197
++ +C IL
Sbjct: 181 PKAKKKKKAQRGACSIL 197
>Os02g0120800 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 337 bits (865), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/197 (81%), Positives = 174/197 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYEN+ KKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCX 180
DLR+DKQFF+DHPG PI+TAQGEEL++ IGA YIECSSKTQ NVK VFD+AIKVVL
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQP 180
Query: 181 XXXXXXNTRKQRSCWIL 197
++ +C IL
Sbjct: 181 PKAKKKKKAQRGACSIL 197
>Os02g0834000 Similar to Rop4 small GTP binding protein
Length = 195
Score = 337 bits (863), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/197 (82%), Positives = 177/197 (89%), Gaps = 2/197 (1%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKL 120
TA EDYNRLRPLSYRGADVFLLAFSLISKASYEN+ KKWIPELRHYAP VPI+LVGTKL
Sbjct: 61 TA--EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 118
Query: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCX 180
DLR+DKQFF+DHPG PISTAQGEEL+++IGAAAYIECSSKTQQN+K+VFD+AIKVVL
Sbjct: 119 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 178
Query: 181 XXXXXXNTRKQRSCWIL 197
+ Q+ C IL
Sbjct: 179 PKQKKKKKKAQKGCAIL 195
>Os02g0742200 Small GTP-binding protein OsRac3
Length = 214
Score = 325 bits (833), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 150/177 (84%), Positives = 164/177 (92%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
S +RFIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVVVD TVNLGLWDT
Sbjct: 4 SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLD 121
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENI KKWIPEL+HYAP VPIVLVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPIVLVGTKLD 123
Query: 122 LREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
LREDK + LDHPG+ P++TAQGEEL++ IGAA YIECSSKTQQNVK VFD+AIKVV+
Sbjct: 124 LREDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFDAAIKVVI 180
>Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 (GTPase protein
ROP10)
Length = 215
Score = 323 bits (827), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 149/177 (84%), Positives = 164/177 (92%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
S +RFIKCVTVGDGAVGKTCMLI YTSN FPTDYVPTVFDNFSANVVVDG TVNLGLWDT
Sbjct: 4 SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLD 121
AGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYEN+ KKW+PEL+HYAP VPIVLVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQHYAPGVPIVLVGTKLD 123
Query: 122 LREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
LREDK + LDHP L P++TAQGEEL++ IGA YIECSSKTQQNVK+VFD+AIKVV+
Sbjct: 124 LREDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVFDAAIKVVI 180
>Os05g0513800 Small GTP-binding protein OsRac2
Length = 214
Score = 309 bits (792), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 144/179 (80%), Positives = 163/179 (91%), Gaps = 1/179 (0%)
Query: 1 MSTA-RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLW 59
MS A +FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDGN VNLGLW
Sbjct: 1 MSGATKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTK 119
DTAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASYEN+ KKW+PELR +APNVPIVLVGTK
Sbjct: 61 DTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTK 120
Query: 120 LDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
LDLR+ + + DHP + I+TAQGEEL++ IGAAAYIECSSKTQQN+K+VFD+AIKVVL
Sbjct: 121 LDLRDHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVFDTAIKVVL 179
>Os01g0229400 Small GTP-binding protein OsRac1
Length = 214
Score = 303 bits (775), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 137/177 (77%), Positives = 159/177 (89%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
+ RFIKCVTVGDGAVGKTCMLI YT N FPTDY+PTVFDNFSANV VDG+ VNLGLWDT
Sbjct: 6 AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65
Query: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLD 121
AGQEDY+RLRPLSYRGADVF+L+FSLIS+ASYEN+ KKW+PELR +AP VP+VLVGTKLD
Sbjct: 66 AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 125
Query: 122 LREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
LRED+ + DHP + I+T QGEEL+++IGA AYIECSSKTQ+N+K+VFD+AIKVVL
Sbjct: 126 LREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 182
>AK107382
Length = 195
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDY 67
K V VGDGA GKTC+LI ++ TFP YVPTVF+N+ A+V VDG V L LWDTAGQEDY
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66
Query: 68 NRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLDLREDKQ 127
+RLRPLSY + V L+ F++ S S +N+ + WI E+ H+ +PI+LVG K DLR D++
Sbjct: 67 DRLRPLSYPDSHVILICFAVDSPDSPDNVQENWISEVLHFCQGLPIILVGCKKDLRYDQK 126
Query: 128 FF--LDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
L P+S +GEE+++ I A Y+ECS+KT + V+ VF+ A + L
Sbjct: 127 IIEELRKTSQKPVSPEEGEEIRKKIAAYKYLECSAKTNEGVREVFEHATRAAL 179
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPEL-RHYAPNVPIVLVGTKLDLR 123
E + + YRGA LL + + ++S+ NI + WI + +H + NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
E K+ + TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR---------AVPTAKGQALADEYG-IKFFETSAKTNLNVEQVF 170
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPEL-RHYAPNVPIVLVGTKLDLR 123
E + + YRGA LL + + ++S+ NI + WI + +H + NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
E K+ + T++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR---------AVPTSKGQALADEYG-IKFFETSAKTNLNVEQVF 170
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPEL-RHYAPNVPIVLVGTKLDLR 123
E + + YRGA LL + + ++S+ NI + WI + +H + NV +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
E K+ + T++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR---------AVPTSKGQALADEYG-IKFFETSAKTNLNVEQVF 170
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N+F D T+ F+ + V+G V +WDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLR 123
E Y + YRGA LL + + ++EN+ K+W+ ELR +A N+ ++L+G K+DL+
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
Query: 124 -------EDKQFFLDHPGLAPISTA 141
ED F + GL+ + T+
Sbjct: 137 HLRSVSLEDATSFAEREGLSFVETS 161
>AK062838
Length = 201
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +T+ Y+ T+ +F + +DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLR 123
E + + YRGA ++ + + + S+ N+ K+W+ E+ YA NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLHEIDRYACENVNKLLVGNKSDLT 126
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
+ +ST +E +G ++E S+K NV++ F
Sbjct: 127 AKR----------VVSTDAAKEFAESLG-IEFLETSAKNAANVETAF 162
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLW 59
MS A K + +GD VGK+C+L+ +T F + T+ F A ++ VD V L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGT 118
DTAGQE + + YRGA LL + + + ++ ++ W+ + R +A N+ I+LVG
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL-ASWLEDARQHANANMTIMLVGN 119
Query: 119 KLDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
K DL + +S +GE+ + G ++E S+KT QNV+ F
Sbjct: 120 KSDLSHRR----------AVSYEEGEQFAKEHG-LIFMEASAKTAQNVEEAF 160
>Os11g0303400 Similar to Small GTP-binding protein OsRac2
Length = 115
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 51/56 (91%)
Query: 44 SANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKK 99
SANV VDGN +NLGLW TAGQEDY+RLR LSYRGAD+F+LAFSLIS+AS+EN+ K+
Sbjct: 15 SANVSVDGNIINLGLWGTAGQEDYSRLRILSYRGADIFVLAFSLISRASHENVLKE 70
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLR 123
E + + YRGA ++ + + + S+ N+ K+W+ E+ YA NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLA 126
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
E++ +S G+ L IG ++E S+K NV+ F
Sbjct: 127 ENR----------VVSYEAGKALADEIG-IPFLETSAKDATNVEKAF 162
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + ++G T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDL- 122
E Y + YRGA LL + + K ++ENI ++W+ ELR +A N+ I++VG K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKQTFENI-QRWLRELRDHADSNIVIMMVGNKSDLN 130
Query: 123 ------REDKQFFLDHPGLAPISTAQGEEL 146
ED Q + GL+ + T+ E L
Sbjct: 131 HLRSVPEEDGQALAEKEGLSFLETSALEAL 160
>Os01g0750000 Similar to Ras-related protein RIC2
Length = 221
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG V +WDTAGQ
Sbjct: 18 LFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQ 77
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA LL + + +A+++N+ +W+ ELR H P++ ++LVG K DLR
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTRRATFDNV-ARWLKELRDHTDPSIVVMLVGNKSDLR 136
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
L +ST G+E + ++E S+ NV++ F
Sbjct: 137 H----------LVAVSTEDGKEYAEA-ESLYFMETSALDATNVENAF 172
>Os03g0151900 Similar to Small GTP-binding protein
Length = 199
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGNTVNLGLWDTAGQ 64
K V +GD VGK+C+++ + F PT V TV +F + + D V +WDTAGQ
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTLALEDSTIVKFEIWDTAGQ 91
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPEL-RHYAPNVPIVLVGTKLDLR 123
E Y L PL YRGA ++ + + S S+ + W+ EL +H +P++ +VLVG K DL
Sbjct: 92 ERYAALAPLYYRGAAAAVVVYDITSPESFSKA-QYWVKELQKHGSPDIIMVLVGNKADLH 150
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIK 175
E++ +S+ + +E +IE S+KT N+ VF+ K
Sbjct: 151 ENRH----------VSSQEAQEYAEK-NNMVFIETSAKTADNINQVFEEIAK 191
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG V +WDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA LL + + +++EN+ ++W+ ELR H PN+ ++LVG K DLR
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLKELRDHTDPNIVVMLVGNKSDLR 132
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
L + T +G+ + ++E S+ NV++ F
Sbjct: 133 H----------LVAVQTDEGKAFAER-ESLYFMETSALESTNVENAF 168
>AF327517
Length = 217
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG V +WDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA LL + + +++EN+ ++W+ ELR H PN+ ++LVG K DLR
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLKELRDHTDPNIVVMLVGNKSDLR 132
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
L + T +G+ + ++E S+ NV++ F
Sbjct: 133 H----------LVAVQTDEGKAFAER-ESLYFMETSALESTNVENAF 168
>Os10g0441800 Similar to RAB5B
Length = 250
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGNTVNLGLWDTAG 63
+K V +GD VGK+C+++ + F PT V TV +F + + D TV +WDTAG
Sbjct: 83 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTLALEDSTTVKFEIWDTAG 141
Query: 64 QEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPEL-RHYAPNVPIVLVGTKLDL 122
QE Y L PL YRGA ++ + + S S+ N + W+ EL +H +P++ + LVG K DL
Sbjct: 142 QERYAALAPLYYRGAGAAIVVYDITSSESF-NKAQYWVKELQKHGSPDMIMALVGNKADL 200
Query: 123 REDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIK 175
+++ +S+ +E +IE S+KT N+ +F+ K
Sbjct: 201 HDNRS----------VSSQDAQEYAER-NTMFFIETSAKTADNINQLFEEIAK 242
>Os07g0496000 Similar to Nt-rab6 protein
Length = 208
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGNTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLRED 125
+ L P R + V ++ F + S+ S+ N KWI E+R +V IVLVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVIVFDVASRQSFLNTS-KWIEEVRTERGSDVIIVLVGNKTDLVDK 129
Query: 126 KQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
+Q +S +GE + +G +IE S+K N+K++F
Sbjct: 130 RQ----------VSIEEGEGKAKDLG-VMFIETSAKAGFNIKALF 163
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F D T+ F+ ++ ++G T+ +WDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLR 123
E Y + YRGA LL + + + S++N+H +W+ ELR +A ++ I++VG K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVH-RWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVV 177
L +S +G+ L G ++E S+ NV+ F + I V
Sbjct: 131 H----------LRAVSEDEGKALAEKEG-LFFLETSAMEAVNVEEAFQTIITEV 173
>AK060839
Length = 209
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K + +GD +VGK+C L+ + +++ Y+ T+ +F + +DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPN-VPIVLVGTKLDLR 123
E + + YRGA ++ + + S+ N+ K+W+ E+ YA + V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDITDMESFNNV-KEWMSEIDKYANDSVCKLLVGNKCDLA 126
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
E + + TA + IG ++E S+K NV+ F
Sbjct: 127 ESR----------VVETAVAQAYADEIG-IPFLETSAKDSINVEEAF 162
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + ++G T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDL- 122
E Y + YRGA LL F + + +++N+ ++W+ ELR +A N+ +++VG K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVFDITKRQTFDNV-QRWLRELRDHADANIVVMMVGNKSDLN 130
Query: 123 ------REDKQFFLDHPGLAPISTAQGEEL 146
ED F + GL+ + T+ E +
Sbjct: 131 HLRSVPEEDGHAFSEKEGLSFLETSALEAI 160
>AK060246
Length = 220
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG + +WDTAGQ
Sbjct: 17 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA LL + + +A+++N+ +W+ ELR H P++ +L+G K DLR
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRAAFDNVG-RWLRELRDHTDPSIVCMLIGNKSDLR 135
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
L +ST G+E + ++E S+ NV + F
Sbjct: 136 H----------LVAVSTEDGKEFAEA-ESMYFMETSALDATNVDNAF 171
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAP-NVPIVLVGTKLDLR 123
E + + YRGA ++ + + + S+ N+ K+W+ E+ YA NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNV-KQWLNEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
+K +S+ + +G ++E S+K NV+ F
Sbjct: 127 ANK----------VVSSETAKAFADEMG-IPFMETSAKNATNVEQAF 162
>Os05g0516800 Similar to Ras-related protein RIC2
Length = 220
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG + +WDTAGQ
Sbjct: 17 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA LL + + +A+++N+ +W+ ELR H P++ +L+G K DLR
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVG-RWLRELRDHTDPSIVCMLIGNKSDLR 135
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
L +ST G+E + ++E S+ NV + F
Sbjct: 136 H----------LVAVSTEDGKEFAEA-ESMYFMETSALDATNVDNAF 171
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAP-NVPIVLVGTKLDLR 123
E + + YRGA ++ + + + S+ N+ K+W+ E+ YA NV +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNV-KQWLNEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
+K +S+ + +G ++E S+K NV+ F
Sbjct: 127 ANK----------VVSSETAKAFADEMG-IPFMETSAKNATNVEQAF 162
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD V +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA L+ + + ++EN+ ++W+ ELR H N+ I+LVG K DLR
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 130
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
H + A+G + + ++E S+ NV+S F
Sbjct: 131 --------HLRAVSVEDAKGFAERE---STFFMETSALESMNVESAF 166
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 14/156 (8%)
Query: 17 VGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSY 75
+GK+C+L+ ++ +TF T ++ T+ +F V +DG V L +WDTAGQE + + Y
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 76 RGADVFLLAFSLISKASYENIHKKWIPEL-RHYAPNVPIVLVGTKLDLREDKQFFLDHPG 134
RGA LL + + ++S+ NI + WI + +H + NV +LVG K+D+ +
Sbjct: 144 RGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKVDMDTKR-------- 194
Query: 135 LAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVF 170
+STAQG++L G + E S+KT QNV+ VF
Sbjct: 195 --VVSTAQGQKLADEYG-MKFFETSAKTNQNVEQVF 227
>Os01g0714900 Similar to RAB7A
Length = 207
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 1 MSTAR---FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNL 56
MST+R +K + +GD VGKT ++ Y F Y T+ +F + V+++ V L
Sbjct: 1 MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
Query: 57 GLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENI---HKKWIPELRHYAPNV-P 112
+WDTAGQE + L YRGAD +L + + S S++ + H +++ + P P
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFP 120
Query: 113 IVLVGTKLDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDS 172
+L+G K+D +D +S + E G Y E S+K +NV S F S
Sbjct: 121 FILLGNKID--------VDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLS 172
Query: 173 AIKVVL 178
K+ L
Sbjct: 173 VAKLAL 178
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G + +WDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLR 123
E Y + YRGA +L + + +++NI +W+ ELR +A N+ I+LVG K DL+
Sbjct: 74 ERYRAITSAYYRGALGAVLVYDVSKPTTFDNI-SRWLKELRDHADANIRIMLVGNKTDLK 132
Query: 124 -------EDKQFFLDHPGLAPISTA 141
+D F + GL+ I T+
Sbjct: 133 HLRAVATDDAHKFAEAEGLSYIETS 157
>Os03g0146000 Similar to RAB1X
Length = 210
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 16/175 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYV-PTVFDNFSAN-VVVDGNTVNLGLWDTAGQE 65
K + +GD AVGK+ +L+S+ S + D + PT+ +F + V+G + L +WDTAGQE
Sbjct: 14 KILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIV--LVGTKLDLR 123
+ + YRGA +L + + + S+ N+ W E+ ++ N + LVG K+D
Sbjct: 74 RFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKECIKMLVGNKVDKN 133
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDS-AIKVV 177
E++ GLA + ++E S+KT++NV+ F+ A+K++
Sbjct: 134 EER-MVTREEGLAFAQES----------GCLFLESSAKTRENVEKCFEELALKIL 177
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQED 66
K V +GD AVGK+ +L + N F D T+ F + +++D +V +WDTAGQE
Sbjct: 12 KVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLRED 125
Y + YRGA LL + + + S+++I +W+ ELR H N+ I+LVG K DL ++
Sbjct: 72 YRAVTSAYYRGALGALLVYDITKRQSFDHI-PRWLEELRGHADKNIVIMLVGNKSDLEDE 130
Query: 126 KQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
+ +ST +E ++E S+ NV++ F + + +
Sbjct: 131 R----------AVSTEDAKEFAEKEN-LFFLETSALQATNVENAFQTVLSEIF 172
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAG 63
R K V +GD GK+ +++ + F T+ F S + V+ TV +WDTAG
Sbjct: 10 RNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 64 QEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDL 122
QE Y+ L P+ YRGA ++ + + + AS+ KKW+ EL+ PN + L G K D+
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNAASFTRA-KKWVQELQAQGNPNTIMALAGNKADM 128
Query: 123 REDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
E +Q P + AQ L ++E S+KT NV VF K +L
Sbjct: 129 VEARQV----PAEEAKTYAQENGL-------FFMETSAKTAINVNDVFHEIAKRLL 173
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQ 64
K V +GD +VGK+ +L + N F + T+ F + +V+DG + +WDTAGQ
Sbjct: 14 LFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E + + YRGA LL + + + +++++ +W+ EL H NV +LVG K DL+
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSV-GRWLNELHTHSDMNVVTILVGNKTDLK 132
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCXXXX 183
++ +STA+G+ L G ++E S+ NV F + +K +
Sbjct: 133 HARE----------VSTAEGKALAESQG-LFFMETSALDSSNVAEAFQTVVKEIYGILSR 181
Query: 184 XXXNTRKQR 192
+++Q+
Sbjct: 182 KVFQSQEQK 190
>Os10g0456600 Ras GTPase family protein
Length = 222
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNT----FPTDYVPTVFDNFSAN-VVVDGNTVNLGLWDTA 62
K + +GD VGK+ +L+S+ D PT+ +F + + G + L +WDTA
Sbjct: 21 KILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDTA 80
Query: 63 GQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIV--LVGTKL 120
GQE + + YRGA +L + + + S+ N+ + W E+ ++ N + LVG K+
Sbjct: 81 GQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKMLVGNKI 140
Query: 121 DLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDS-AIKVV 177
D +ED++ GLA + ++E S+KT+ NV+ F+ A+K++
Sbjct: 141 D-KEDERTVTREEGLAFAEES----------GCLFLESSAKTRDNVEKCFEELALKIM 187
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA L+ + + ++EN+ ++W+ EL+ H N+ I+LVG K DLR
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLR 130
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQED 66
K V +GDG VGKT +++ Y ++ F TV ++ + +VV+G + L +WDTAGQE
Sbjct: 16 KLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEK 75
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDLRED 125
++ L P+ YR AD LL + + ++ + KW+ EL+ A ++ + + K DL
Sbjct: 76 FHALGPIYYRDADAALLVYDITDNDTFLRV-TKWVKELKQMANKDIVMAIAANKSDLVRS 134
Query: 126 KQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
K I T + IGA ++ S+K + +F K +L
Sbjct: 135 KH----------IDTNEAASYAESIGATLFV-TSAKAGTGIDDIFSDIAKRLL 176
>Os05g0536900 Similar to RAB7A
Length = 206
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 1 MSTAR---FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNL 56
M+++R +K + +GD VGKT ++ Y + F Y T+ +F + V+++ V L
Sbjct: 1 MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL 60
Query: 57 GLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENI---HKKWIPELRHYAP-NVP 112
+WDTAGQE + L YRGAD +L + + +K S+ + H +++ + P + P
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP 120
Query: 113 IVLVGTKLDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDS 172
+L+G K+D +D I + +E G Y E S+K NV S F
Sbjct: 121 FILLGNKID--------IDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLC 172
Query: 173 AIKVVL 178
K+ L
Sbjct: 173 IAKLAL 178
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD VGK+ +L + + F + T+ F+ V VD V +WDTAGQ
Sbjct: 19 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQ 78
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E Y + YRGA L+ + + + ++EN ++W+ ELR H N+ ++LVG K DLR
Sbjct: 79 ERYRAITSAYYRGAVGALVVYDVTRRITFENA-ERWLKELRDHTDANIVVMLVGNKADLR 137
Query: 124 -------EDKQFFLDHPGLAPISTAQGE 144
ED + F + G + T+ E
Sbjct: 138 HLRAVPAEDARAFAEAHGTFSMETSALE 165
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAG 63
R K V +GD GK+ +++ + F T+ F S + V+ TV +WDTAG
Sbjct: 10 RNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAG 69
Query: 64 QEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIV-LVGTKLDL 122
QE Y+ L P+ YRGA ++ + + + AS+ KKW+ EL+ + +V L G K DL
Sbjct: 70 QERYHSLAPMYYRGAAAAIVVYDITNPASFTRA-KKWVQELQAQGNSSTVVALAGNKADL 128
Query: 123 REDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
E +Q ++ + AQ L ++E S+KT NV +F K +L
Sbjct: 129 LETRQVQIEEAK----TYAQENGL-------FFMETSAKTATNVNDIFYEIAKRLL 173
>Os06g0714600 Ras GTPase family protein
Length = 225
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQED 66
K V +GD AVGKT +L +T + F D T+ F V + G V +WDTAGQE
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQER 68
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPN-VPIVLVGTKLDL 122
Y + YRGA +L + + S+ S+ + +W+ +LR +A N + ++L+G K DL
Sbjct: 69 YRAVTSAYYRGALGAMLVYDVTSRRSFHHA-ARWLHDLRAHADNSIVVMLIGNKADL 124
>Os10g0208000
Length = 355
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAG 63
RF K VT+GD VGK+C+L+ +T F T + A VV VDG L +WDTAG
Sbjct: 8 RF-KFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAG 66
Query: 64 QEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPE-LRHYAPNVPIVLVGTKLDL 122
QE + + YRG LL + + S W+ + +H + + I+L+G K DL
Sbjct: 67 QEAFRCITRSYYRGNAACLLVYDITS----------WLEDATQHASARMTIILIGNKCDL 116
Query: 123 REDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVV 177
+ +S +GE+ + G ++E S+KT NV+ F A + V
Sbjct: 117 SHRR----------VVSYQEGEQFAKEHG-LLFMEASAKTAHNVEKAFILAARTV 160
>Os05g0516600 Small GTP binding protein
Length = 206
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLG 57
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPE-LRHYAP----NVP 112
+WDTAGQE + L YRGAD +L + + S S++N++ W E L +P N P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN-NWREEFLIQASPSDPDNFP 119
Query: 113 IVLVGTKLDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDS 172
VL+G K+D +D +S + + G Y E S+K NV+ F
Sbjct: 120 FVLLGNKVD--------VDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQC 171
Query: 173 AIKVVL 178
+K L
Sbjct: 172 IVKNAL 177
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F T+ F + ++G V +WDTAGQ
Sbjct: 13 LFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELR-HYAPNVPIVLVGTKLDLR 123
E + + YRGA LL + + +++++N+ +W+ EL H V +LVG K D
Sbjct: 73 ERFRAVTSAYYRGAFGALLVYDISRRSTFDNVG-RWLQELNTHSDTTVAKMLVGNKCD-- 129
Query: 124 EDKQFFLDHPGLAPISTAQGEELKRMIGAAA--YIECSSKTQQNVKSVFDSAIKVV 177
LD+ P+ EE K + A ++E S+ NV++ F+ IK +
Sbjct: 130 ------LDNIREVPV-----EEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEI 174
>Os01g0227300 Similar to RAB7D
Length = 207
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V +D L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPE-LRHYAP----NVPIVLVGTK 119
E + L YRGAD +L + + S+E ++ W E L +P N P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLN-SWREEFLIQASPSDPENFPFVVLGNK 126
Query: 120 LDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFD 171
+D +D +S + + G Y E S+K NV++ F+
Sbjct: 127 ID--------VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFE 170
>Os09g0527600 Similar to GTP-binding protein (Fragment)
Length = 239
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQED 66
K V VGD AVGKT +L +T + F D T+ F + + V +WDTAGQE
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQER 83
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIV-LVGTKLDL 122
Y + YRGA ++ + + + ++EN+ +W+ ELR +A +V L+G K D+
Sbjct: 84 YRAVTSAYYRGALGAMVVYDITRRRTFENV-ARWVEELRAHADGSTVVALIGNKADM 139
>AK107227
Length = 227
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 19 KTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGA 78
K+ + + + N F + Y PT+ D + +V+DG + + DTAG E + L+ L +
Sbjct: 16 KSALTVQFVRNVFVSTYDPTIEDTYRKMLVIDGQQCMVEILDTAGTEQFLALKELYIKSG 75
Query: 79 DVFLLAFSLISKASYENIH--KKWIPELRHYAPNVPIVLVGTKLDLREDKQFFLDHPGLA 136
F+L FSL S AS + ++ I ++ +P+VLVG K DLR D+Q
Sbjct: 76 QGFILVFSLTSLASVNELGPLREAIVRIKDTTA-IPLVLVGNKSDLRADRQ--------- 125
Query: 137 PISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVV 177
+ G L + G + E S++ + NV +F ++ +
Sbjct: 126 -VPREVGTSLSKAWGNVPFYEASARKRINVDEIFADVVRQI 165
>Os03g0810600 Ras GTPase family protein
Length = 642
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQED 66
++ V +GD GK+ +++S + FP + VP V + V + + DT+ +
Sbjct: 16 VRVVVIGDPGTGKSSLVVSVATEAFPEN-VPRVMPPTRLPADYFPDRVPITIVDTSSSPE 74
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLDLREDK 126
+ + AD +L ++ A+ E + W+PELR P+++VG KLDLR+++
Sbjct: 75 HRAKLIAECQAADAVVLTYACDRPATLERLSTFWLPELRRLQLKAPVIVVGCKLDLRDEQ 134
Query: 127 QFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVL 178
Q L+ +API ++ IECS+ Q V VF A K VL
Sbjct: 135 QVSLEQ-VMAPI-------MQTFREIETCIECSALRQIQVPEVFYYAQKAVL 178
>Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 221
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGNTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLDLR 123
+ LR Y ++ F + S+ +Y+N+ W +L N+PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>Os01g0611100 Similar to GTP-binding nuclear protein Ran-2
Length = 221
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGNTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLDLR 123
+ LR Y ++ F + S+ +Y+N+ W +L N+PIVL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVK 130
>AK104720
Length = 164
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPI 113
+ L +WDTAGQE + L YRGA ++ + + + ++ N+ W E+ Y+ N
Sbjct: 16 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 75
Query: 114 V--LVGTKLDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFD 171
+ LVG K+D ++ ++ +G E R G ++ECS+KT+ NV+ F+
Sbjct: 76 IKMLVGNKVDKESER----------AVTKKEGIEFAREYG-CLFLECSAKTKVNVEQCFE 124
Query: 172 SAIKVVL 178
+ +L
Sbjct: 125 ELVLKIL 131
>Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 226
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGNTVNLGLWDTAGQE 65
K + VGDG GKT + + + F Y PT+ + + V WDTAGQE
Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLDLR 123
+ LR Y ++ F + S+ +Y+N+ W ++ N+PIVL G K+D++
Sbjct: 78 KFGGLRDGYYIHGHCAIIMFDVTSRLTYKNV-PTWHKDICRVCDNIPIVLCGNKVDMK 134
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,276,280
Number of extensions: 246324
Number of successful extensions: 537
Number of sequences better than 1.0e-10: 58
Number of HSP's gapped: 462
Number of HSP's successfully gapped: 58
Length of query: 197
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 101
Effective length of database: 12,023,257
Effective search space: 1214348957
Effective search space used: 1214348957
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)