BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0229400 Os01g0229400|AB029508
(214 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0229400 Small GTP-binding protein OsRac1 444 e-125
Os05g0513800 Small GTP-binding protein OsRac2 359 e-100
Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 ... 321 2e-88
Os02g0742200 Small GTP-binding protein OsRac3 320 5e-88
Os02g0312600 Similar to Small GTP-binding protein (Fragment) 310 4e-85
Os02g0834000 Similar to Rop4 small GTP binding protein 302 1e-82
Os02g0120800 Similar to Small GTP-binding protein (Fragment) 301 2e-82
AK100585 300 4e-82
AK107382 175 2e-44
Os11g0303400 Similar to Small GTP-binding protein OsRac2 98 4e-21
Os01g0558600 Ras-related protein RIC1 96 3e-20
Os03g0151900 Similar to Small GTP-binding protein 94 7e-20
AK062838 93 1e-19
Os01g0750000 Similar to Ras-related protein RIC2 93 1e-19
Os01g0714900 Similar to RAB7A 91 5e-19
Os07g0496000 Similar to Nt-rab6 protein 91 7e-19
Os05g0461300 Similar to RAB8C 91 9e-19
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 90 1e-18
Os03g0819900 Similar to RAB8C 90 2e-18
Os10g0441800 Similar to RAB5B 89 2e-18
Os02g0653800 Similar to GTP-binding protein 89 2e-18
Os01g0179700 Similar to GTP-binding protein YPTM2 89 2e-18
AK060839 88 5e-18
Os04g0470100 Similar to Small GTP binding protein Rab2 88 5e-18
Os05g0516800 Similar to Ras-related protein RIC2 87 7e-18
AK060246 87 1e-17
Os03g0843100 Ras GTPase family protein 87 1e-17
Os01g0848700 Similar to Ras-related protein Rab11C 87 1e-17
Os12g0631100 Ras small GTPase, Ras type family protein 86 2e-17
Os06g0551400 Ras-related protein RIC2 86 2e-17
AF327517 86 2e-17
Os03g0823700 Similar to Ras-related protein Rab11C 86 3e-17
Os03g0146000 Similar to RAB1X 85 5e-17
Os05g0280200 Similar to Ras-related protein Rab11A 84 7e-17
Os05g0536900 Similar to RAB7A 83 1e-16
Os10g0377400 Similar to Ras-related protein Rab11D 82 4e-16
Os05g0516600 Small GTP binding protein 80 8e-16
Os05g0105100 Similar to Small GTPase rab11-related 80 1e-15
Os05g0564400 Similar to GTP-binding protein 80 1e-15
Os09g0327100 Similar to GTP-binding protein 80 1e-15
Os09g0527600 Similar to GTP-binding protein (Fragment) 79 3e-15
Os08g0525000 Ras GTPase family protein 79 3e-15
Os03g0666500 Similar to Ras-related protein RHA1 78 4e-15
Os10g0208000 77 7e-15
Os01g0227300 Similar to RAB7D 77 1e-14
Os10g0456600 Ras GTPase family protein 76 2e-14
Os07g0195100 Similar to Ras-related protein ARA-3 75 4e-14
Os01g0667600 Similar to GTP-binding protein 75 4e-14
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 75 5e-14
Os06g0714600 Ras GTPase family protein 74 1e-13
AK107227 71 6e-13
Os05g0341600 Similar to Ras-related protein Rab-21 71 6e-13
Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (... 70 1e-12
Os03g0810600 Ras GTPase family protein 70 2e-12
AK104720 69 2e-12
AK111978 69 3e-12
Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (... 69 3e-12
Os01g0611100 Similar to GTP-binding nuclear protein Ran-2 69 3e-12
AK110439 67 9e-12
>Os01g0229400 Small GTP-binding protein OsRac1
Length = 214
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNL 60
MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNL
Sbjct: 1 MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNL 60
Query: 61 GLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLV 120
GLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLV
Sbjct: 61 GLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLV 120
Query: 121 GTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKV 180
GTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKV
Sbjct: 121 GTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKV 180
Query: 181 VLQPPRHKDVTRKKLQSSSNRPVRRYFCGSACFA 214
VLQPPRHKDVTRKKLQSSSNRPVRRYFCGSACFA
Sbjct: 181 VLQPPRHKDVTRKKLQSSSNRPVRRYFCGSACFA 214
>Os05g0513800 Small GTP-binding protein OsRac2
Length = 214
Score = 359 bits (921), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/211 (81%), Positives = 188/211 (89%), Gaps = 3/211 (1%)
Query: 5 AAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWD 64
+ AT+FIKCVTVGDGAVGKTCMLICYT NKFPTDYIPTVFDNFSANVSVDG++VNLGLWD
Sbjct: 2 SGATKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 61
Query: 65 TAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKL 124
TAGQEDYSRLRPLSYRGAD+F+L+FSLISRASYENV KKWMPELRRFAP VP+VLVGTKL
Sbjct: 62 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 121
Query: 125 DLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQP 184
DLR+ R+YLADHPA+S ITT QGEELRK IGA AYIECSSKTQ+NIKAVFDTAIKVVLQP
Sbjct: 122 DLRDHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVFDTAIKVVLQP 181
Query: 185 PRHKDVT---RKKLQSSSNRPVRRYFCGSAC 212
PR + T RKK + S+ ++ CGSAC
Sbjct: 182 PRRRGETTMARKKTRRSTGCSLKNLMCGSAC 212
>Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 (GTPase protein
ROP10)
Length = 215
Score = 321 bits (823), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 147/182 (80%), Positives = 167/182 (91%)
Query: 4 AAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLW 63
A++A+RFIKCVTVGDGAVGKTCMLICYT NKFPTDY+PTVFDNFSANV VDG+ VNLGLW
Sbjct: 2 ASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLW 61
Query: 64 DTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTK 123
DTAGQEDY+RLRPLSYRGADVF+L+FSL+SRASYENV KKW+PEL+ +APGVP+VLVGTK
Sbjct: 62 DTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQHYAPGVPIVLVGTK 121
Query: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
LDLRED+ YL DHP+ +TT QGEELRK IGA YIECSSKTQ+N+KAVFD AIKVV++
Sbjct: 122 LDLREDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVFDAAIKVVIK 181
Query: 184 PP 185
PP
Sbjct: 182 PP 183
>Os02g0742200 Small GTP-binding protein OsRac3
Length = 214
Score = 320 bits (820), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 146/182 (80%), Positives = 164/182 (90%)
Query: 4 AAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLW 63
A++A+RFIKCVTVGDGAVGKTCMLICYT NKFPTDYIPTVFDNFSANV VD + VNLGLW
Sbjct: 2 ASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLW 61
Query: 64 DTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTK 123
DTAGQEDY+RLRPLSYRGADVF+L+FSL+SRASYEN+ KKW+PEL+ +APGVP+VLVGTK
Sbjct: 62 DTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPIVLVGTK 121
Query: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
LDLRED+ YL DHP +TT QGEELRK IGA YIECSSKTQ+N+K VFD AIKVV+Q
Sbjct: 122 LDLREDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFDAAIKVVIQ 181
Query: 184 PP 185
PP
Sbjct: 182 PP 183
>Os02g0312600 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 310 bits (795), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 167/192 (86%)
Query: 6 AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65
+ RFIKCVTVGDGAVGKTCMLI YT N FPTDY+PTVFDNFSANV VDG+ VNLGLWDT
Sbjct: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
Query: 66 AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 125
AGQEDY+RLRPLSYRGADVF+L+FSLIS+ASYEN+ KKW+PELR +AP VP+VLVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLD 121
Query: 126 LREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPP 185
LRED+ + DHP + I+T QGEEL+++IGA AYIECSSKTQ+N+K+VFD+AIKVVL PP
Sbjct: 122 LREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFDSAIKVVLCPP 181
Query: 186 RHKDVTRKKLQS 197
+ K +K +S
Sbjct: 182 KPKKKNTRKQRS 193
>Os02g0834000 Similar to Rop4 small GTP binding protein
Length = 195
Score = 302 bits (774), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/177 (80%), Positives = 159/177 (89%), Gaps = 2/177 (1%)
Query: 6 AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65
+A+RFIKCVTVGDGAVGKTCMLI YT N FPTDY+PTVFDNFSANV VDGS VNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
Query: 66 AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 125
A EDY+RLRPLSYRGADVF+L+FSLIS+ASYENV KKW+PELR +APGVP++LVGTKLD
Sbjct: 62 A--EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLD 119
Query: 126 LREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 182
LR+D+ + DHP + I+T QGEELRKLIGA AYIECSSKTQ+NIKAVFD AIKVVL
Sbjct: 120 LRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVL 176
>Os02g0120800 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 301 bits (771), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 157/177 (88%)
Query: 6 AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65
+A+RFIKCVTVGDGAVGKTCMLI YT N FPTDY+PTVFDNFSANV VDG+ VNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
Query: 66 AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 125
AGQEDY+RLRPLSYRGADVF+L+FSLIS+ASYENV KKW+PEL+ +APGVP++LVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLD 121
Query: 126 LREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 182
LR+D+ + DHP + ITT QGEELRK IGA YIECSSKTQ N+K VFD AIKVVL
Sbjct: 122 LRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVL 178
>AK100585
Length = 197
Score = 300 bits (769), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 139/177 (78%), Positives = 156/177 (88%)
Query: 6 AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65
+A+RFIKCVTVGDGAVGKTCMLI YT N FPTDY+PTVFDNFSANV VDG+ VNLGLWDT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
Query: 66 AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 125
AGQEDY+RLRPLSYRGADVF+L+FSLIS+ASYENV KKW+PEL+ +APGVP++LVGTKLD
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLD 121
Query: 126 LREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 182
LR+D+ + DHP ITT QGEELRK IGA YIECSSKTQ N+K VFD AIKVVL
Sbjct: 122 LRDDKQFFVDHPGVVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVL 178
>AK107382
Length = 195
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 12 KCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGQEDY 71
K V VGDGA GKTC+LI ++ FP Y+PTVF+N+ A+V VDG V L LWDTAGQEDY
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66
Query: 72 SRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDRA 131
RLRPLSY + V ++ F++ S S +NVQ+ W+ E+ F G+P++LVG K DLR D+
Sbjct: 67 DRLRPLSYPDSHVILICFAVDSPDSPDNVQENWISEVLHFCQGLPIILVGCKKDLRYDQK 126
Query: 132 YLADHPASSI--ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 182
+ + +S ++ E+GEE+RK I A Y+ECS+KT ++ VF+ A + L
Sbjct: 127 IIEELRKTSQKPVSPEEGEEIRKKIAAYKYLECSAKTNEGVREVFEHATRAAL 179
>Os11g0303400 Similar to Small GTP-binding protein OsRac2
Length = 115
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 53/56 (94%)
Query: 48 SANVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKK 103
SANVSVDG+++NLGLW TAGQEDYSRLR LSYRGAD+F+L+FSLISRAS+ENV K+
Sbjct: 15 SANVSVDGNIINLGLWGTAGQEDYSRLRILSYRGADIFVLAFSLISRASHENVLKE 70
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K + +GD VGK+C+L+ + + + YI T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E + + YRGA I+ + + + S+ NV K+W+ E+ R+A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLA 126
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDT 176
E+R +++ E G+ L IG + ++E S+K N++ F T
Sbjct: 127 ENR----------VVSYEAGKALADEIG-IPFLETSAKDATNVEKAFMT 164
>Os03g0151900 Similar to Small GTP-binding protein
Length = 199
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 97/176 (55%), Gaps = 15/176 (8%)
Query: 12 KCVTVGDGAVGKTCMLICYTCNKF-PTDYIPTVFDNFSANVSV-DGSVVNLGLWDTAGQE 69
K V +GD VGK+C+++ + +F PT + S +++ D ++V +WDTAGQE
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQE 92
Query: 70 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRF-APGVPVVLVGTKLDLRE 128
Y+ L PL YRGA ++ + + S S+ Q W+ EL++ +P + +VLVG K DL E
Sbjct: 93 RYAALAPLYYRGAAAAVVVYDITSPESFSKAQ-YWVKELQKHGSPDIIMVLVGNKADLHE 151
Query: 129 DRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQP 184
+R +++++ +E + V +IE S+KT NI VF+ K + +P
Sbjct: 152 NRH----------VSSQEAQEYAEKNNMV-FIETSAKTADNINQVFEEIAKRLPRP 196
>AK062838
Length = 201
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K + +GD VGK+C+L+ + + + YI T+ +F + +DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E + + YRGA I+ + + + S+ NV K+W+ E+ R+A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLHEIDRYACENVNKLLVGNKSDL- 125
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
A +++T+ +E + +G + ++E S+K N++ F
Sbjct: 126 ---------TAKRVVSTDAAKEFAESLG-IEFLETSAKNAANVETAF 162
>Os01g0750000 Similar to Ras-related protein RIC2
Length = 221
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 22/200 (11%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ ++ VDG VV +WDTAGQ
Sbjct: 18 LFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQ 77
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + RA+++NV +W+ ELR P + V+LVG K DLR
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVA-RWLKELRDHTDPSIVVMLVGNKSDLR 136
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRH 187
H + ++TE G+E + ++ ++E S+ N++ F + + Q
Sbjct: 137 --------HLVA--VSTEDGKEYAE-AESLYFMETSALDATNVENAFAEVLTQIYQT--- 182
Query: 188 KDVTRKKLQSS---SNRPVR 204
V++K +++S SN P++
Sbjct: 183 --VSKKTVEASDDGSNAPIK 200
>Os01g0714900 Similar to RAB7A
Length = 207
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
+K + +GD VGKT ++ Y KF Y T+ +F + V ++ +V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPE-LRRFAPG----VPVVLVGTK 123
E + L YRGAD +L + + S S++ + W E L + +P P +L+G K
Sbjct: 69 ERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLN-TWHDEFLNQASPSDPKTFPFILLGNK 127
Query: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
+D+ D S +++ ++ E G + Y E S+K RN+ + F + K+ L+
Sbjct: 128 IDV--------DGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALE 179
Query: 184 PPRHKDV 190
R +D+
Sbjct: 180 HERDQDI 186
>Os07g0496000 Similar to Nt-rab6 protein
Length = 208
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 1 MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTV-FDNFSANVSVDGSVVN 59
M+ +A ++ K V +GD +VGKT ++ + +KF Y T+ D S + ++ V
Sbjct: 1 MAPVSALAKY-KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
Query: 60 LGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELR-RFAPGVPVV 118
L LWDTAGQE + L P R + V ++ F + SR S+ N KW+ E+R V +V
Sbjct: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTS-KWIEEVRTERGSDVIIV 118
Query: 119 LVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
LVG K DL + R ++ E+GE K +G V +IE S+K NIKA+F
Sbjct: 119 LVGNKTDLVDKRQ----------VSIEEGEGKAKDLG-VMFIETSAKAGFNIKALF 163
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA +L + + +S+ N+ + W+ + + A V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ---- 183
E + + T +G+ L G + + E S+KT N++ VF + + + Q
Sbjct: 134 ESK---------RAVPTAKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAE 183
Query: 184 ---PPRHKDVT-RKKLQSSSNRPVRRYFCGSAC 212
P K + K +++P GSAC
Sbjct: 184 TDSKPEDKTIKINNKTDQGADKPAA---SGSAC 213
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
IK + +GD VGK+C+L+ ++ F T +I T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA +L + + +S+ N+ + W+ + + A V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRH 187
E + + T +G+ L G + + E S+KT N++ VF + + + Q
Sbjct: 134 ESK---------RAVPTSKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAE 183
Query: 188 KDVTRKKLQSSSNRP 202
D + N+P
Sbjct: 184 TDSKTEDRTIKINKP 198
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 13/167 (7%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
IK + +GD VGK+C+L+ ++ F T +I T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA +L + + +S+ N+ + W+ + + A V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
E + + T +G+ L G + + E S+KT N++ VF
Sbjct: 134 ESK---------RAVPTSKGQALADEYG-IKFFETSAKTNLNVEQVF 170
>Os10g0441800 Similar to RAB5B
Length = 250
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 11 IKCVTVGDGAVGKTCMLICYTCNKF-PTDYIPTVFDNFSANVSV-DGSVVNLGLWDTAGQ 68
+K V +GD VGK+C+++ + +F PT + S +++ D + V +WDTAGQ
Sbjct: 83 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQ 142
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRF-APGVPVVLVGTKLDLR 127
E Y+ L PL YRGA I+ + + S S+ Q W+ EL++ +P + + LVG K DL
Sbjct: 143 ERYAALAPLYYRGAGAAIVVYDITSSESFNKAQ-YWVKELQKHGSPDMIMALVGNKADLH 201
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQP 184
++R+ ++++ +E + + +IE S+KT NI +F+ K + +P
Sbjct: 202 DNRS----------VSSQDAQEYAER-NTMFFIETSAKTADNINQLFEEIAKRLPRP 247
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K + +GD VGK+C+L+ + + + YI T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA I+ + + + S+ NV K+W+ E+ R+A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNV-KQWLNEIDRYASDNVNKLLVGNKSDL- 125
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
A+ ++++E + +G + ++E S+K N++ F
Sbjct: 126 ---------TANKVVSSETAKAFADEMG-IPFMETSAKNATNVEQAF 162
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K + +GD VGK+C+L+ + + + YI T+ +F V DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA I+ + + + S+ NV K+W+ E+ R+A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNV-KQWLNEIDRYASDNVNKLLVGNKSDL- 125
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
A+ ++++E + +G + ++E S+K N++ F
Sbjct: 126 ---------TANKVVSSETAKAFADEMG-IPFMETSAKNATNVEQAF 162
>AK060839
Length = 209
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K + +GD +VGK+C L+ + + + YI T+ +F + +DG + L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E + + YRGA I+ + + S+ NV K+WM E+ ++A V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDITDMESFNNV-KEWMSEIDKYANDSVCKLLVGNKCDLA 126
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
E R ++ T + IG + ++E S+K N++ F
Sbjct: 127 ESR----------VVETAVAQAYADEIG-IPFLETSAKDSINVEEAF 162
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 14/167 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSAN-VSVDGSVVNLGLWDTAGQ 68
K + +GD VGK+C+L+ +T +F + T+ F A ++VD V L +WDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQ 65
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E + + YRGA +L + + R ++ ++ W+ + R+ A + ++LVG K DL
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHL-ASWLEDARQHANANMTIMLVGNKSDLS 124
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
RA ++ E+GE+ K G + ++E S+KT +N++ F
Sbjct: 125 HRRA----------VSYEEGEQFAKEHGLI-FMEASAKTAQNVEEAF 160
>Os05g0516800 Similar to Ras-related protein RIC2
Length = 220
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 1 MSSAAAATR-------FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVS 52
MS+AA R K V +GD VGK+ +L +T N+F + T+ F+ ++
Sbjct: 1 MSAAAGGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQ 60
Query: 53 VDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA 112
VDG V+ +WDTAGQE Y + YRGA +L + + RA+++NV +W+ ELR
Sbjct: 61 VDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNV-GRWLRELRDHT 119
Query: 113 -PGVPVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIK 171
P + +L+G K DLR H + ++TE G+E + ++ ++E S+ N+
Sbjct: 120 DPSIVCMLIGNKSDLR--------HLVA--VSTEDGKEFAE-AESMYFMETSALDATNVD 168
Query: 172 AVFDTAIKVVLQPPRHKDV 190
F + + Q K V
Sbjct: 169 NAFAEVLTQIYQIVNKKPV 187
>AK060246
Length = 220
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 1 MSSAAAATR-------FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVS 52
MS+AA R K V +GD VGK+ +L +T N+F + T+ F+ ++
Sbjct: 1 MSAAAGGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQ 60
Query: 53 VDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA 112
VDG V+ +WDTAGQE Y + YRGA +L + + RA+++NV +W+ ELR
Sbjct: 61 VDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRAAFDNV-GRWLRELRDHT 119
Query: 113 -PGVPVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIK 171
P + +L+G K DLR H + ++TE G+E + ++ ++E S+ N+
Sbjct: 120 DPSIVCMLIGNKSDLR--------HLVA--VSTEDGKEFAE-AESMYFMETSALDATNVD 168
Query: 172 AVFDTAIKVVLQPPRHKDV 190
F + + Q K V
Sbjct: 169 NAFAEVLTQMYQIVNKKPV 187
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N F D T+ F+ + V+G +V +WDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + ++ENV K+W+ ELR A + V+L+G K+DL+
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENV-KRWLKELRDHADSNIVVMLIGNKIDLK 136
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAI 178
R+ ++ A+S E ++++E S+ N+ F T +
Sbjct: 137 HLRS-VSLEDATSFAERE----------GLSFVETSALDATNVDKAFQTVL 176
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ + ++G + +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L F + R +++NVQ +W+ ELR A + V++VG K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVFDITKRQTFDNVQ-RWLRELRDHADANIVVMMVGNKSDLN 130
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRH 187
R+ + E G + G ++++E S+ N++ F T + + Q
Sbjct: 131 HLRS----------VPEEDGHAFSEKEG-LSFLETSALEAINVEKAFHTVLSEIHQIVSK 179
Query: 188 KDVTRKKLQSSSNRPVR 204
K + ++ S++ R ++
Sbjct: 180 KALAAQESASTNGRSMQ 196
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 9 RFIKCVTVGDGAVGKTCMLICYTCNKF---PTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65
R K V +GD GK+ +++ + +F I F FS ++V+ V +WDT
Sbjct: 10 RNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAF--FSQTLAVNDETVKFEIWDT 67
Query: 66 AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELR-RFAPGVPVVLVGTKL 124
AGQE Y L P+ YRGA I+ + + + AS+ KKW+ EL+ + P + L G K
Sbjct: 68 AGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRA-KKWVQELQAQGNPNTIMALAGNKA 126
Query: 125 DLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQP 184
D+ E R PA T Q L ++E S+KT N+ VF K +LQ
Sbjct: 127 DMVEARQV----PAEEAKTYAQENGLF-------FMETSAKTAINVNDVFHEIAKRLLQG 175
Query: 185 PRHKDVTRKKLQSSSNRPVRRYFCGSAC 212
+ +D + + RP R S+C
Sbjct: 176 QQAQDTPAGMV--LNQRPAERMVSSSSC 201
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ ++ VDG VV +WDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + +++ENV+ +W+ ELR P + V+LVG K DLR
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVE-RWLKELRDHTDPNIVVMLVGNKSDLR 132
>AF327517
Length = 217
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ ++ VDG VV +WDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + +++ENV+ +W+ ELR P + V+LVG K DLR
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVE-RWLKELRDHTDPNIVVMLVGNKSDLR 132
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 19/188 (10%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ + ++G + +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDTAGQ 71
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + + ++EN+Q +W+ ELR A + +++VG K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKQTFENIQ-RWLRELRDHADSNIVIMMVGNKSDLN 130
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRH 187
R+ + E G+ L + G ++++E S+ N++ F T +K + H
Sbjct: 131 HLRS----------VPEEDGQALAEKEG-LSFLETSALEALNVEKAFQTILKDI-----H 174
Query: 188 KDVTRKKL 195
+ +++K L
Sbjct: 175 QIISKKAL 182
>Os03g0146000 Similar to RAB1X
Length = 210
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 12 KCVTVGDGAVGKTCMLICYTCNKFPTDYI-PTVFDNFSAN-VSVDGSVVNLGLWDTAGQE 69
K + +GD AVGK+ +L+ + D I PT+ +F ++V+G + L +WDTAGQE
Sbjct: 14 KILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQE 73
Query: 70 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVV--LVGTKLDLR 127
+ + YRGA IL + + R S+ N+ W E+ + + LVG K+D
Sbjct: 74 RFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKECIKMLVGNKVDKN 133
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPP 185
E+R ++T E+G + G + ++E S+KT+ N++ F+ +L+ P
Sbjct: 134 EER----------MVTREEGLAFAQESGCL-FLESSAKTRENVEKCFEELALKILEVP 180
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 14/174 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N F D T+ F+ ++ ++G + +WDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + R S++NV +W+ ELR A + +++VG K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVH-RWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVV 181
RA ++ ++G+ L + G + ++E S+ N++ F T I V
Sbjct: 131 HLRA----------VSEDEGKALAEKEG-LFFLETSAMEAVNVEEAFQTIITEV 173
>Os05g0536900 Similar to RAB7A
Length = 206
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
+K + +GD VGKT ++ Y KF Y T+ +F + V ++ +V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 68
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPE-LRRFAPG----VPVVLVGTK 123
E + L YRGAD +L + + ++ S+ N W E L + +P P +L+G K
Sbjct: 69 ERFQSLGVAFYRGADCCMLVYDVNAKRSF-NALNTWHDEFLTQASPSDPKHFPFILLGNK 127
Query: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
+D+ D I ++ +E G + Y E S+K N+ + F K+ L+
Sbjct: 128 IDI--------DAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALE 179
Query: 184 PPRHKDVTRKKLQSSSNRPVRRYFCGSAC 212
+D+ K + + P + G AC
Sbjct: 180 HEHDQDIYFKTVAQPA--PDTEHTSGCAC 206
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 1 MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVN 59
M+ K V +GD AVGK+ +L + N+F D T+ F + +D V
Sbjct: 1 MAGGEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVK 60
Query: 60 LGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVV 118
+WDTAGQE Y + YRGA +L + + R S++++ +W+ ELR A + ++
Sbjct: 61 AQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHI-PRWLEELRGHADKNIVIM 119
Query: 119 LVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAI 178
LVG K DL ++RA ++TE +E + + ++E S+ N++ F T +
Sbjct: 120 LVGNKSDLEDERA----------VSTEDAKEFAEKEN-LFFLETSALQATNVENAFQTVL 168
Query: 179 KVVLQPPRHKDV 190
+ + K++
Sbjct: 169 SEIFKIHSKKNM 180
>Os05g0516600 Small GTP binding protein
Length = 206
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
+K + +GD VGKT ++ Y KF Y T+ +F + V + + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPE-LRRFAP----GVPVVLVGTK 123
E + L YRGAD +L + + S S++N+ W E L + +P P VL+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN-NWREEFLIQASPSDPDNFPFVLLGNK 126
Query: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
+D+ D S +++ ++ + G + Y E S+K N++ F +K L+
Sbjct: 127 VDV--------DGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALK 178
Query: 184 PPRHKDV 190
+++
Sbjct: 179 NEPEEEL 185
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ + V+G ++ +WDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 73
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA +L + + +++N+ +W+ ELR A + ++LVG K DL+
Sbjct: 74 ERYRAITSAYYRGALGAVLVYDVSKPTTFDNIS-RWLKELRDHADANIRIMLVGNKTDLK 132
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
RA + T+ + + G ++YIE S+ N++ F
Sbjct: 133 HLRA----------VATDDAHKFAEAEG-LSYIETSALEATNVEEAF 168
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD VV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA ++ + + ++ENV+ +WM EL+ + ++LVG K DLR
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVE-RWMRELKDHTDANIVIMLVGNKADLR 130
Query: 128 EDRA 131
RA
Sbjct: 131 HLRA 134
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD VV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 71
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA ++ + + ++ENV+ +W+ ELR + ++LVG K DLR
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVE-RWLKELRDHTDANIVIMLVGNKADLR 130
Query: 128 EDRA 131
RA
Sbjct: 131 HLRA 134
>Os09g0527600 Similar to GTP-binding protein (Fragment)
Length = 239
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 11 IKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQE 69
K V VGD AVGKT +L +T ++F D T+ F +S+ V +WDTAGQE
Sbjct: 23 FKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQE 82
Query: 70 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVV-LVGTKLDLRE 128
Y + YRGA ++ + + R ++ENV +W+ ELR A G VV L+G K D+
Sbjct: 83 RYRAVTSAYYRGALGAMVVYDITRRRTFENV-ARWVEELRAHADGSTVVALIGNKADMPA 141
Query: 129 DRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRHK 188
R +A A+ EQG + + E S+ + N+ F T ++ +
Sbjct: 142 GRREVAADEAAR-FAEEQG---------LFFSEASALSGDNVDRAFLTLLEEIFAV---- 187
Query: 189 DVTRKKLQSSSNRPVR 204
V+R+ L+ R +R
Sbjct: 188 -VSRRALELDEARRMR 202
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
K V +GD AVGK+ +L Y N+F T+ F + ++ ++G V +WDTAGQ
Sbjct: 13 LFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQ 72
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA +L + + R++++NV +W+ EL + V +LVG K DL
Sbjct: 73 ERFRAVTSAYYRGAFGALLVYDISRRSTFDNV-GRWLQELNTHSDTTVAKMLVGNKCDLD 131
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRH 187
R + E+G+ L + G + ++E S+ N++ F+ IK + +
Sbjct: 132 NIRE----------VPVEEGKALAEAEG-LFFMETSALDSTNVRTAFEIVIKEI-----Y 175
Query: 188 KDVTRKKLQSSS 199
+V+RK L S S
Sbjct: 176 SNVSRKILNSDS 187
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 22/216 (10%)
Query: 2 SSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKF---PTDYIPTVFDNFSANVSVDGSVV 58
++A R K V +GD GK+ +++ + +F I F FS ++V+ V
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAF--FSQTLAVNDETV 60
Query: 59 NLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVV 118
+WDTAGQE Y L P+ YRGA I+ + + + AS+ KKW+ EL+ VV
Sbjct: 61 KFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRA-KKWVQELQAQGNSSTVV 119
Query: 119 -LVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTA 177
L G K DL E R + E+ + + G + ++E S+KT N+ +F
Sbjct: 120 ALAGNKADLLETRQ----------VQIEEAKTYAQENG-LFFMETSAKTATNVNDIFYEI 168
Query: 178 IKVVLQ-PPRHKDVTRKKLQSSSNRPVRRYFCGSAC 212
K +LQ P L S RP R ++C
Sbjct: 169 AKRLLQGQPAQNPQAGMVL---SQRPNERLVSSASC 201
>Os10g0208000
Length = 355
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 24/181 (13%)
Query: 3 SAAAATRFIKCVTVGDGAVGKTCMLICYTCNKF-PTDYIPTVFDNFSANVSVDGSVVNLG 61
S A RF K VT+GD VGK+C+L+ +T +F + + T + + V+VDG L
Sbjct: 2 SCTYAYRF-KFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQ 60
Query: 62 LWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPG-VPVVLV 120
+WDTAGQE + + YRG +L + + S W+ + + A + ++L+
Sbjct: 61 IWDTAGQEAFRCITRSYYRGNAACLLVYDITS----------WLEDATQHASARMTIILI 110
Query: 121 GTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKV 180
G K DL R +++ ++GE+ K G + ++E S+KT N++ F A +
Sbjct: 111 GNKCDLSHRR----------VVSYQEGEQFAKEHG-LLFMEASAKTAHNVEKAFILAART 159
Query: 181 V 181
V
Sbjct: 160 V 160
>Os01g0227300 Similar to RAB7D
Length = 207
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
+K + +GD VGKT ++ Y KF Y T+ +F + V +D + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPE-LRRFAP----GVPVVLVGTK 123
E + L YRGAD +L + + S+E + W E L + +P P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLN-SWREEFLIQASPSDPENFPFVVLGNK 126
Query: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
+D+ D S ++ ++ + G + Y E S+K N++A F+ + ++
Sbjct: 127 IDV--------DGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIK 178
Query: 184 PPRHKDV 190
+++
Sbjct: 179 NEPEEEI 185
>Os10g0456600 Ras GTPase family protein
Length = 222
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 12 KCVTVGDGAVGKTCMLICYTCN----KFPTDYIPTVFDNFSAN-VSVDGSVVNLGLWDTA 66
K + +GD VGK+ +L+ + D PT+ +F +++ G + L +WDTA
Sbjct: 21 KILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDTA 80
Query: 67 GQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVV--LVGTKL 124
GQE + + YRGA IL + + R S+ N+ + W E+ + + LVG K+
Sbjct: 81 GQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKMLVGNKI 140
Query: 125 DLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDT-AIKVVLQ 183
D ++R +T E+G + G + ++E S+KT+ N++ F+ A+K++
Sbjct: 141 DKEDERT----------VTREEGLAFAEESGCL-FLESSAKTRDNVEKCFEELALKIMDV 189
Query: 184 PP 185
P
Sbjct: 190 PS 191
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%), Gaps = 14/165 (8%)
Query: 21 VGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQEDYSRLRPLSY 79
+GK+C+L+ ++ + F T +I T+ +F V +DG V L +WDTAGQE + + Y
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 80 RGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLREDRAYLADHPA 138
RGA +L + + +S+ N+ + W+ + + A V +LVG K+D+ R
Sbjct: 144 RGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKVDMDTKR-------- 194
Query: 139 SSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
+++T QG++L G + + E S+KT +N++ VF T + + Q
Sbjct: 195 --VVSTAQGQKLADEYG-MKFFETSAKTNQNVEQVFFTIARDIKQ 236
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQ 68
K V +GD VGK+ +L + ++F + T+ F+ V VD +V +WDTAGQ
Sbjct: 19 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQ 78
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 127
E Y + YRGA ++ + + R ++EN + +W+ ELR + V+LVG K DLR
Sbjct: 79 ERYRAITSAYYRGAVGALVVYDVTRRITFENAE-RWLKELRDHTDANIVVMLVGNKADLR 137
Query: 128 EDRAYLAD 135
RA A+
Sbjct: 138 HLRAVPAE 145
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
K V +GD +VGK+ +L + N+F + T+ F + + +DG + +WDTAGQ
Sbjct: 14 LFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQ 73
Query: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAP-GVPVVLVGTKLDLR 127
E + + YRGA +L + + R ++++V +W+ EL + V +LVG K DL+
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSV-GRWLNELHTHSDMNVVTILVGNKTDLK 132
Query: 128 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPPRH 187
R ++T +G+ L + G + ++E S+ N+ F T +K + +
Sbjct: 133 HARE----------VSTAEGKALAESQG-LFFMETSALDSSNVAEAFQTVVKEI-----Y 176
Query: 188 KDVTRKKLQSSSNR 201
++RK QS +
Sbjct: 177 GILSRKVFQSQEQK 190
>Os06g0714600 Ras GTPase family protein
Length = 225
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 12 KCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSA-NVSVDGSVVNLGLWDTAGQED 70
K V +GD AVGKT +L +T ++F D T+ F V + G V +WDTAGQE
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQER 68
Query: 71 YSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPG-VPVVLVGTKLDL 126
Y + YRGA +L + + SR S+ + +W+ +LR A + V+L+G K DL
Sbjct: 69 YRAVTSAYYRGALGAMLVYDVTSRRSFHHA-ARWLHDLRAHADNSIVVMLIGNKADL 124
>AK107227
Length = 227
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 23 KTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGA 82
K+ + + + N F + Y PT+ D + + +DG + + DTAG E + L+ L +
Sbjct: 16 KSALTVQFVRNVFVSTYDPTIEDTYRKMLVIDGQQCMVEILDTAGTEQFLALKELYIKSG 75
Query: 83 DVFILSFSLISRASYENVQKKWMPELR-RFAPGVPVVLVGTKLDLREDRAYLADHPASSI 141
FIL FSL S AS + +R + +P+VLVG K DLR DR
Sbjct: 76 QGFILVFSLTSLASVNELGPLREAIVRIKDTTAIPLVLVGNKSDLRADRQ---------- 125
Query: 142 ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVV 181
+ E G L K G V + E S++ + N+ +F ++ +
Sbjct: 126 VPREVGTSLSKAWGNVPFYEASARKRINVDEIFADVVRQI 165
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 12 KCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQED 70
K V +GDG VGKT +++ Y + F TV ++ + + V+G + L +WDTAGQE
Sbjct: 16 KLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEK 75
Query: 71 YSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDR 130
+ L P+ YR AD +L + + ++ V KW+ EL++ A V+ +
Sbjct: 76 FHALGPIYYRDADAALLVYDITDNDTFLRVT-KWVKELKQMANKDIVMAIA--------- 125
Query: 131 AYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
A +D S I T + + IGA ++ S+K I +F K +L+
Sbjct: 126 ANKSDLVRSKHIDTNEAASYAESIGATLFV-TSAKAGTGIDDIFSDIAKRLLE 177
>Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 221
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 11 IKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTV-FDNFSANVSVDGSVVNLGLWDTAGQE 69
K V VGDG GKT + + +F Y PT+ + + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQE 73
Query: 70 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRED 129
+ LR Y I+ F + SR +Y+NV W +L R +P+VL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 130 RAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
+ + +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>Os03g0810600 Ras GTPase family protein
Length = 642
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 11 IKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGQED 70
++ V +GD GK+ +++ FP + +P V V + + DT+ +
Sbjct: 16 VRVVVIGDPGTGKSSLVVSVATEAFPEN-VPRVMPPTRLPADYFPDRVPITIVDTSSSPE 74
Query: 71 YSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDR 130
+ + AD +L+++ A+ E + W+PELRR PV++VG KLDLR+++
Sbjct: 75 HRAKLIAECQAADAVVLTYACDRPATLERLSTFWLPELRRLQLKAPVIVVGCKLDLRDEQ 134
Query: 131 AYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQP 184
+ + I+ T + E IECS+ Q + VF A K VL P
Sbjct: 135 QVSLEQVMAPIMQTFREIE--------TCIECSALRQIQVPEVFYYAQKAVLHP 180
>AK104720
Length = 164
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 58 VNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPV 117
+ L +WDTAGQE + L YRGA I+ + + R ++ N+ W E+ ++
Sbjct: 16 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 75
Query: 118 V--LVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFD 175
+ LVG K+D +RA +T ++G E + G + ++ECS+KT+ N++ F+
Sbjct: 76 IKMLVGNKVDKESERA----------VTKKEGIEFAREYGCL-FLECSAKTKVNVEQCFE 124
Query: 176 TAIKVVLQPP 185
+ +L P
Sbjct: 125 ELVLKILDTP 134
>AK111978
Length = 225
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 11 IKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTV-FDNFSANVSVDGSVVNLGLWDTAGQE 69
K + VGDG GKT + + +F YI TV D + + ++ WDTAGQE
Sbjct: 23 FKLILVGDGGTGKTTFVKRHLTGEFEKRYIATVGVDVHPLHFHTNCGMICFNCWDTAGQE 82
Query: 70 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRED 129
+ LR Y I+ F + SR +Y +V W ++ R +P+VLVG K+D D
Sbjct: 83 KFGGLRDGYYIQGQCAIIMFDVTSRNTYRSV-PNWYRDIVRVCDVIPMVLVGNKVDA-PD 140
Query: 130 RAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
RA A +IT + + L+ Y + S+KT N + F
Sbjct: 141 RAVKA-----KMITFHRKKTLQ-------YYDISAKTNYNFEKPF 173
>Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 226
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 4 AAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTV-FDNFSANVSVDGSVVNLGL 62
AA K + VGDG GKT + + +F Y PT+ + + V
Sbjct: 11 AAVGYPSFKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCC 70
Query: 63 WDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGT 122
WDTAGQE + LR Y I+ F + SR +Y+NV W ++ R +P+VL G
Sbjct: 71 WDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNV-PTWHKDICRVCDNIPIVLCGN 129
Query: 123 KLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
K+D++ + + ++T + + L+ Y E S+K+ N + F
Sbjct: 130 KVDMKNRQV------KAKMVTFHRKKNLQ-------YYEISAKSNYNFEKPF 168
>Os01g0611100 Similar to GTP-binding nuclear protein Ran-2
Length = 221
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 11 IKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTV-FDNFSANVSVDGSVVNLGLWDTAGQE 69
K V VGDG GKT + + +F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 70 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRED 129
+ LR Y I+ F + SR +Y+NV W +L R +P+VL G K+D++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 130 RAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 174
+ + +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEVSAKSNYNFEKPF 164
>AK110439
Length = 508
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 23 KTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGA 82
K+ + I + F DY PT+ D++ ++DG V + + DTAGQE+Y+ +R G
Sbjct: 329 KSAITIQFIQGLFVEDYDPTIEDSYRKTCTIDGLVTVIDILDTAGQEEYAAMRDTYIAGG 388
Query: 83 DVFILSFSLISRASYENVQKKWMPELR-RFAPGVPVVLVGTKLDLREDRAYLADHPASSI 141
+ F+L++++ S SYE + LR + P+VLV K DL + R
Sbjct: 389 ESFLLTYAINSLHSYEETASFYKQILRIKDCDSFPIVLVANKCDLEKQRQ---------- 438
Query: 142 ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVV 181
+ EQ + K V + E S+ + NI+ +F A++ +
Sbjct: 439 VPEEQARQQAKQW-KVQFFETSAYMKINIEEIFFEAVREI 477
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,299,902
Number of extensions: 283723
Number of successful extensions: 662
Number of sequences better than 1.0e-10: 59
Number of HSP's gapped: 605
Number of HSP's successfully gapped: 59
Length of query: 214
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 117
Effective length of database: 11,971,043
Effective search space: 1400612031
Effective search space used: 1400612031
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)