BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0227300 Os01g0227300|AK070320
(207 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0227300 Similar to RAB7D 429 e-121
Os05g0516600 Small GTP binding protein 379 e-106
Os05g0536900 Similar to RAB7A 313 6e-86
Os01g0714900 Similar to RAB7A 308 1e-84
Os01g0558600 Ras-related protein RIC1 135 2e-32
Os01g0179700 Similar to GTP-binding protein YPTM2 135 2e-32
Os02g0653800 Similar to GTP-binding protein 135 3e-32
Os05g0564400 Similar to GTP-binding protein 130 7e-31
Os03g0819900 Similar to RAB8C 128 3e-30
Os03g0823700 Similar to Ras-related protein Rab11C 128 3e-30
Os01g0667600 Similar to GTP-binding protein 128 3e-30
Os05g0280200 Similar to Ras-related protein Rab11A 127 5e-30
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 127 6e-30
Os05g0105100 Similar to Small GTPase rab11-related 127 6e-30
Os05g0461300 Similar to RAB8C 127 6e-30
Os09g0327100 Similar to GTP-binding protein 127 8e-30
Os03g0843100 Ras GTPase family protein 126 1e-29
AK062838 125 2e-29
Os10g0377400 Similar to Ras-related protein Rab11D 124 5e-29
Os06g0551400 Ras-related protein RIC2 124 5e-29
AF327517 124 5e-29
Os07g0496000 Similar to Nt-rab6 protein 123 7e-29
Os01g0848700 Similar to Ras-related protein Rab11C 122 1e-28
Os12g0631100 Ras small GTPase, Ras type family protein 120 7e-28
Os08g0525000 Ras GTPase family protein 120 8e-28
Os03g0151900 Similar to Small GTP-binding protein 120 9e-28
AK060839 119 1e-27
Os04g0470100 Similar to Small GTP binding protein Rab2 118 3e-27
Os07g0634200 Similar to Rab GTP-binding protein Rab11a 118 4e-27
Os10g0441800 Similar to RAB5B 117 8e-27
Os05g0516800 Similar to Ras-related protein RIC2 116 1e-26
AK060246 116 1e-26
Os01g0750000 Similar to Ras-related protein RIC2 115 2e-26
Os05g0341600 Similar to Ras-related protein Rab-21 113 9e-26
Os03g0666500 Similar to Ras-related protein RHA1 113 1e-25
Os09g0527600 Similar to GTP-binding protein (Fragment) 108 4e-24
Os10g0456600 Ras GTPase family protein 102 2e-22
Os06g0714600 Ras GTPase family protein 101 4e-22
Os03g0146000 Similar to RAB1X 101 4e-22
Os07g0195100 Similar to Ras-related protein ARA-3 100 8e-22
Os10g0208000 99 2e-21
Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (... 94 6e-20
Os01g0611100 Similar to GTP-binding nuclear protein Ran-2 93 1e-19
Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (... 91 5e-19
AK111978 86 2e-17
Os05g0513800 Small GTP-binding protein OsRac2 83 1e-16
Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 ... 80 7e-16
Os06g0687100 Ras GTPase family protein 77 7e-15
Os02g0742200 Small GTP-binding protein OsRac3 77 1e-14
Os01g0229400 Small GTP-binding protein OsRac1 77 1e-14
Os02g0312600 Similar to Small GTP-binding protein (Fragment) 74 6e-14
Os02g0120800 Similar to Small GTP-binding protein (Fragment) 73 2e-13
AK107227 72 2e-13
AK100585 72 3e-13
AK104720 69 4e-12
AK110439 64 9e-11
>Os01g0227300 Similar to RAB7D
Length = 207
Score = 429 bits (1103), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE 180
VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE
Sbjct: 121 VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE 180
Query: 181 PEEEIYLPDTIDVGGAGRQQRSSGCEC 207
PEEEIYLPDTIDVGGAGRQQRSSGCEC
Sbjct: 181 PEEEIYLPDTIDVGGAGRQQRSSGCEC 207
>Os05g0516600 Small GTP binding protein
Length = 206
Score = 379 bits (973), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/205 (87%), Positives = 192/205 (93%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
MASRRR LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ +DRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ LN+WREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNE 180
V+LGNK+DVDGGNSR VSEKKAKAWCASKGNIPYFETSAK+G NVE AF+CI +NA+KNE
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNE 180
Query: 181 PEEEIYLPDTIDVGGAGRQQRSSGC 205
PEEE+Y+PDT+DV G R QRSSGC
Sbjct: 181 PEEELYVPDTVDVVGGNRAQRSSGC 205
>Os05g0536900 Similar to RAB7A
Length = 206
Score = 313 bits (802), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 172/206 (83%), Gaps = 2/206 (0%)
Query: 2 ASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQI 61
+SRRR LLKVI+LGDSGVGKTSLMNQYVNKKFS QYKATIGADF+TKEV I+DRL TLQI
Sbjct: 3 SSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQI 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFV 121
WDTAGQERFQSLGVAFYRGADCC+LVYDVN +SF LN+W +EFL QASPSDP++FPF+
Sbjct: 63 WDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFI 122
Query: 122 VLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEP 181
+LGNKID+D GN R + EKKAK WC SKGNIPYFETSAK+ +NV++AF CIA+ A+++E
Sbjct: 123 LLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEH 182
Query: 182 EEEIYLPDTIDVGGAGRQQRSSGCEC 207
+++IY A + +SGC C
Sbjct: 183 DQDIYFKTV--AQPAPDTEHTSGCAC 206
>Os01g0714900 Similar to RAB7A
Length = 207
Score = 308 bits (790), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 172/206 (83%), Gaps = 1/206 (0%)
Query: 2 ASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQI 61
SRRR LLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKEV I+DRL TLQI
Sbjct: 3 TSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQI 62
Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFV 121
WDTAGQERFQSLGVAFYRGADCCVLVYDVN +SF+ LN+W +EFL QASPSDP+ FPF+
Sbjct: 63 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFI 122
Query: 122 VLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEP 181
+LGNKIDVDGG SR VSEKKA WC+SKGNIPYFETSAKE NV++AF +A+ A+++E
Sbjct: 123 LLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALEHER 182
Query: 182 EEEIYLPDTIDVGGAGRQQRSSGCEC 207
+++IY + +QR SGC C
Sbjct: 183 DQDIYFQTVVPDPVPEAEQR-SGCAC 207
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 10/201 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + Y +TIG DF + V+ D + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF + W E AS EN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS----ENVNKLLVGNKC 123
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---RNAIKNEPEEE 184
D+ +R VS + KA G IP+ ETSAK+ NVE AF +A +N + ++P
Sbjct: 124 DL--AENRVVSYEAGKALADEIG-IPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180
Query: 185 IYLPDTIDVGGAGRQQRSSGC 205
P T+ + G Q+SS C
Sbjct: 181 ASKPATVQMRGQPVAQQSSCC 201
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ D + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF + W E AS +N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----DNVNKLLVGNKS 123
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---RNAIKNEPEEE 184
D+ ++ VS + AKA+ G IP+ ETSAK NVE AF +A ++ + ++P
Sbjct: 124 DLTA--NKVVSSETAKAFADEMG-IPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAS 180
Query: 185 IYLPDTIDVGGAGRQQRSSGC 205
P T+ + G Q++S C
Sbjct: 181 NARPPTVQIRGQPVNQKTSCC 201
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ D + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF + W E AS +N +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----DNVNKLLVGNKS 123
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---RNAIKNEPEEE 184
D+ ++ VS + AKA+ G IP+ ETSAK NVE AF +A ++ + ++P
Sbjct: 124 DLTA--NKVVSSETAKAFADEMG-IPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAA 180
Query: 185 IYLPDTIDVGGAGRQQRSSGC 205
P T+ + G Q++S C
Sbjct: 181 NARPPTVQIRGQPVNQKTSCC 201
>Os05g0564400 Similar to GTP-binding protein
Length = 217
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ + +DD++ QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA ++VYDV +FE + W E N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMREL----KDHTDANIVIMLVGNKA 127
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + R VS + AKA+ A K N + ETSA E NVE AF
Sbjct: 128 DL--RHLRAVSTEDAKAF-AEKENTFFMETSALESMNVENAF 166
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 14/205 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + V++D + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF + +W AS +N +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYL 187
D+D + R V K +A G I +FETSAK NVE F IAR+ IK E
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARD-IKQRLSETDSK 187
Query: 188 PD--TIDVGGAG-----RQQRSSGC 205
P+ TI + G Q+S+ C
Sbjct: 188 PEDRTIKIKSEGEAEAAAAQKSACC 212
>Os03g0823700 Similar to Ras-related protein Rab11C
Length = 215
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 107/168 (63%), Gaps = 7/168 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +QI+ + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ ++FE + W E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADS----NIVIMMVGNKS 127
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARN 175
D++ + R+V E+ +A A K + + ETSA E NVE AF+ I ++
Sbjct: 128 DLN--HLRSVPEEDGQA-LAEKEGLSFLETSALEALNVEKAFQTILKD 172
>Os01g0667600 Similar to GTP-binding protein
Length = 224
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 15/178 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + ++TIG +F TK V++DDRL QIWDTAGQ
Sbjct: 19 LFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQ 78
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA ++VYDV +FE W +E N +++GNK
Sbjct: 79 ERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDA----NIVVMLVGNKA 134
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF--------ECIARNAI 177
D+ + R V + A+A+ + G ETSA E NVE AF ++RNA+
Sbjct: 135 DLR--HLRAVPAEDARAFAEAHGTFS-METSALEATNVEGAFTEVLAQIYRVVSRNAL 189
>Os05g0280200 Similar to Ras-related protein Rab11A
Length = 217
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q++ + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SF+ ++ W E A S +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
D+ + R VSE + KA A K + + ETSA E NVE AF+ I
Sbjct: 128 DLI--HLRAVSEDEGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + +++D + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF + +W AS +N +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARN 175
D+D + R V K +A G I +FETSAK NVE F IAR+
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARD 176
>Os05g0105100 Similar to Small GTPase rab11-related
Length = 220
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 109/178 (61%), Gaps = 13/178 (7%)
Query: 1 MASRRRM------LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDD 54
MA RR L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + ++
Sbjct: 1 MAGTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEG 60
Query: 55 RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSD 114
++ QIWDTAGQER++++ A+YRGA VLVYDV+ +F+ ++ W +E A
Sbjct: 61 KIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADA-- 118
Query: 115 PENFPFVVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
N +++GNK D+ + R V+ A + ++G + Y ETSA E NVE AF+ I
Sbjct: 119 --NIRIMLVGNKTDLK--HLRAVATDDAHKFAEAEG-LSYIETSALEATNVEEAFQLI 171
>Os05g0461300 Similar to RAB8C
Length = 216
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 13/205 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + +++D + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ A+YRGA +LVYDV SF + +W AS +N +++GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKA 130
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNA------IKNEP 181
D+D + R V K +A G I +FETSAK NVE F IAR+ ++P
Sbjct: 131 DMD-ESKRAVPTAKGQALADEYG-IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKP 188
Query: 182 EEE-IYLPDTIDVGGAGRQQRSSGC 205
E++ I + + D G S C
Sbjct: 189 EDKTIKINNKTDQGADKPAASGSAC 213
>Os09g0327100 Similar to GTP-binding protein
Length = 216
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 122/209 (58%), Gaps = 18/209 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +++DD++ QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA ++VYDV +FE + W +E N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDA----NIVIMLVGNKA 127
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYL 187
D+ + R VS + AK + A + + + ETSA E NVE+AF + + ++ + +
Sbjct: 128 DLR--HLRAVSVEDAKGF-AERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDI 184
Query: 188 PD---------TIDVGGAG--RQQRSSGC 205
D TI+VGG + SGC
Sbjct: 185 GDDPAAPPRGQTINVGGKDDVSAVKKSGC 213
>Os03g0843100 Ras GTPase family protein
Length = 223
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK++L++++ FS K+TIG +F T+ +Q++ ++ QIWDTAGQ
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FE + W +E A N +++GNKI
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADS----NIVVMLIGNKI 133
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
D+ + R+VS + A ++ +G + + ETSA + NV+ AF+ +
Sbjct: 134 DLK--HLRSVSLEDATSFAEREG-LSFVETSALDATNVDKAFQTV 175
>AK062838
Length = 201
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 13/202 (6%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + +++D + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ ++YRGA ++VYDV +SF + W E A EN +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYAC----ENVNKLLVGNKS 123
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---RNAIKNEPEEE 184
D+ R VS AK + S G I + ETSAK NVE AF +A + + N P
Sbjct: 124 DLTA--KRVVSTDAAKEFAESLG-IEFLETSAKNAANVETAFMMMAAQIKKRMANAPTAA 180
Query: 185 IYLPDT-IDVGGAGRQQRSSGC 205
P+ + + G ++ SGC
Sbjct: 181 --KPNAGVRLTGTSVKESKSGC 200
>Os10g0377400 Similar to Ras-related protein Rab11D
Length = 216
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
+ KV+++GDS VGK+ ++ ++ +FS KATIG +F T+ + ID + QIWDTAGQ
Sbjct: 10 VFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTAGQ 69
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYD+ +SF+ + W EE A +N +++GNK
Sbjct: 70 ERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHAD----KNIVIMLVGNKS 125
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
D++ + R VS + AK + A K N+ + ETSA + NVE AF+ +
Sbjct: 126 DLE--DERAVSTEDAKEF-AEKENLFFLETSALQATNVENAFQTV 167
>Os06g0551400 Ras-related protein RIC2
Length = 217
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q+D ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FE + W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + E KA A + ++ + ETSA E NVE AF
Sbjct: 130 DLRHLVAVQTDEGKA---FAERESLYFMETSALESTNVENAF 168
>AF327517
Length = 217
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q+D ++ QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +FE + W +E P N +++GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKS 129
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + E KA A + ++ + ETSA E NVE AF
Sbjct: 130 DLRHLVAVQTDEGKA---FAERESLYFMETSALESTNVENAF 168
>Os07g0496000 Similar to Nt-rab6 protein
Length = 208
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQER 69
K++ LGD VGKTS++ +++ KF N Y+ATIG DFL+K + ++DR LQ+WDTAGQER
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 70 FQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDV 129
F+SL ++ R + V+V+DV +SF + W EE + + V++GNK D+
Sbjct: 71 FRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGS----DVIIVLVGNKTDL 126
Query: 130 DGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYLPD 189
++ E + K A + + ETSAK GFN++A F IA E D
Sbjct: 127 VDKRQVSIEEGEGK---AKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQED 183
Query: 190 TIDV 193
+DV
Sbjct: 184 MVDV 187
>Os01g0848700 Similar to Ras-related protein Rab11C
Length = 216
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +QI+ + QIWDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LV+D+ ++F+ + W E A N +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADA----NIVVMMVGNKS 127
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
D++ + R+V E+ A+ +G + + ETSA E NVE AF +
Sbjct: 128 DLN--HLRSVPEEDGHAFSEKEG-LSFLETSALEAINVEKAFHTV 169
>Os12g0631100 Ras small GTPase, Ras type family protein
Length = 203
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQER 69
K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + ++D +IWDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 70 FQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDV 129
+ SL +YRGA ++VYD+ SF R W +E Q +P N + GNK D+
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNP----NTIMALAGNKADM 128
Query: 130 DGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYLPD 189
+R V ++AK + G + + ETSAK NV F IA+ ++ + ++
Sbjct: 129 V--EARQVPAEEAKTYAQENG-LFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGM 185
Query: 190 TIDVGGAGRQQRSSGC 205
++ A R SS C
Sbjct: 186 VLNQRPAERMVSSSSC 201
>Os08g0525000 Ras GTPase family protein
Length = 216
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+I+GDS VGK++L+++Y +F+ KATIG +F T+ + I+ + QIWDTAGQ
Sbjct: 13 LFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD++ +F+ + W +E + + + +++GNK
Sbjct: 73 ERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAK----MLVGNKC 128
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKN 179
D+D N R V ++ KA ++G + + ETSA + NV AFE + + N
Sbjct: 129 DLD--NIREVPVEEGKALAEAEG-LFFMETSALDSTNVRTAFEIVIKEIYSN 177
>Os03g0151900 Similar to Small GTP-binding protein
Length = 199
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 102/166 (61%), Gaps = 8/166 (4%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDR-LFTLQIWDTAGQE 68
K+++LGDSGVGK+ ++ ++V +F K T+GA FL++ + ++D + +IWDTAGQE
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAGQE 92
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
R+ +L +YRGA V+VYD+ +SF + W +E SP + V++GNK D
Sbjct: 93 RYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSP----DIIMVLVGNKAD 148
Query: 129 VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
+ +R VS ++A+ + A K N+ + ETSAK N+ FE IA+
Sbjct: 149 LH--ENRHVSSQEAQEY-AEKNNMVFIETSAKTADNINQVFEEIAK 191
>AK060839
Length = 209
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K++++GDS VGK+ + ++ + + + Y +TIG DF + +++D + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQIWDTAGQ 67
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ ++YRGA ++VYD+ +SF + W E A+ S + +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDITDMESFNNVKEWMSEIDKYANDSVCK----LLVGNKC 123
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ SR V A+A+ A + IP+ ETSAK+ NVE AF
Sbjct: 124 DL--AESRVVETAVAQAY-ADEIGIPFLETSAKDSINVEEAF 162
>Os04g0470100 Similar to Small GTP binding protein Rab2
Length = 211
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + + +D R LQIWDTAGQ
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
E F+S+ ++YRGA +LVYD+ ++F L SW E+ A N +++GNK
Sbjct: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED----ARQHANANMTIMLVGNKS 121
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + R VS ++ + + G I + E SAK NVE AF
Sbjct: 122 DLS--HRRAVSYEEGEQFAKEHGLI-FMEASAKTAQNVEEAF 160
>Os07g0634200 Similar to Rab GTP-binding protein Rab11a
Length = 220
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 103/167 (61%), Gaps = 7/167 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K+++LGDS VGK++L+ ++ +F K+TIG +F T+++ ID + QIWDTAGQ
Sbjct: 14 LFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQ 73
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ERF+++ A+YRGA +LVYD++ ++F+ + W E + N +++GNK
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDM----NVVTILVGNKT 129
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
D+ ++R VS + KA S+G + + ETSA + NV AF+ + +
Sbjct: 130 DLK--HAREVSTAEGKALAESQG-LFFMETSALDSSNVAEAFQTVVK 173
>Os10g0441800 Similar to RAB5B
Length = 250
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 5 RRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRL-FTLQIWD 63
+ + +K+++LGDSGVGK+ ++ ++V +F K T+GA FL++ + ++D +IWD
Sbjct: 79 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWD 138
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVL 123
TAGQER+ +L +YRGA ++VYD+ ++SF + W +E SP + ++
Sbjct: 139 TAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSP----DMIMALV 194
Query: 124 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEP 181
GNK D+ ++R+VS + A+ + A + + + ETSAK N+ FE IA+ + P
Sbjct: 195 GNKADLH--DNRSVSSQDAQEY-AERNTMFFIETSAKTADNINQLFEEIAKRLPRPTP 249
>Os05g0516800 Similar to Ras-related protein RIC2
Length = 220
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q+D ++ QIWDTAGQ
Sbjct: 17 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+ + W E PS +++GNK
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPS----IVCMLIGNKS 132
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + VS + K + ++ ++ + ETSA + NV+ AF
Sbjct: 133 DLR--HLVAVSTEDGKEFAEAE-SMYFMETSALDATNVDNAF 171
>AK060246
Length = 220
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q+D ++ QIWDTAGQ
Sbjct: 17 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+ + W E PS +++GNK
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDVTRRAAFDNVGRWLRELRDHTDPS----IVCMLIGNKS 132
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + VS + K + ++ ++ + ETSA + NV+ AF
Sbjct: 133 DLR--HLVAVSTEDGKEFAEAE-SMYFMETSALDATNVDNAF 171
>Os01g0750000 Similar to Ras-related protein RIC2
Length = 221
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
L K +++GDSGVGK++L++++ +F + K+TIG +F T+ +Q+D ++ QIWDTAGQ
Sbjct: 18 LFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQ 77
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +F+ + W +E PS +++GNK
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPS----IVVMLVGNKS 133
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
D+ + VS + K + ++ ++ + ETSA + NVE AF
Sbjct: 134 DL--RHLVAVSTEDGKEYAEAE-SLYFMETSALDATNVENAF 172
>Os05g0341600 Similar to Ras-related protein Rab-21
Length = 212
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 7/169 (4%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQER 69
K+++LGD VGKTSL+ +YVN FS++ +AT+ A +LTK + ++ TL IWDTAGQE+
Sbjct: 16 KLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQEK 75
Query: 70 FQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDV 129
F +LG +YR AD +LVYD+ +F R+ W +E A+ ++ + NK D+
Sbjct: 76 FHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMAN----KDIVMAIAANKSDL 131
Query: 130 DGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIK 178
S+ + +A ++ S G F TSAK G ++ F IA+ ++
Sbjct: 132 --VRSKHIDTNEAASYAESIGAT-LFVTSAKAGTGIDDIFSDIAKRLLE 177
>Os03g0666500 Similar to Ras-related protein RHA1
Length = 203
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQER 69
K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + ++D +IWDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 70 FQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDV 129
+ SL +YRGA ++VYD+ SF R W +E Q + S + GNK D+
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSST----VVALAGNKADL 128
Query: 130 DGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEE 183
+R V ++AK + G + + ETSAK NV F IA+ ++ +P +
Sbjct: 129 L--ETRQVQIEEAKTYAQENG-LFFMETSAKTATNVNDIFYEIAKRLLQGQPAQ 179
>Os09g0527600 Similar to GTP-binding protein (Fragment)
Length = 239
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 33/225 (14%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
+ KV+++GDS VGKT L+ ++ +F K+TIG +F T+ + + + QIWDTAGQ
Sbjct: 22 VFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQ 81
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA ++VYD+ ++FE + W EE A S ++GNK
Sbjct: 82 ERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGST----VVALIGNKA 137
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAA--------FECIARNAIKN 179
D+ G +++ A+ A + + + E SA G NV+ A F ++R A+
Sbjct: 138 DMPAGRREVAADEAAR--FAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRAL-- 193
Query: 180 EPEEEIYLPD--------------TIDVGG---AGRQQRSSGCEC 207
E +E + D T+DVG ++SS C C
Sbjct: 194 ELDEARRMRDGGAGGGEVLSLKGTTLDVGSIMETSAMKKSSQCSC 238
>Os10g0456600 Ras GTPase family protein
Length = 222
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 11/170 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNK----KFSNQYKATIGADFLTKEVQIDDRLFTLQIWDT 64
K++++GDSGVGK+SL+ +V + TIG DF K + I + L IWDT
Sbjct: 20 FKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDT 79
Query: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERL-NSWREEFLIQASPSDPENFPFVVL 123
AGQERF+++ ++YRGA +LVYDV +SF L W +E I++ S+ + +V
Sbjct: 80 AGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKE--IESHSSNKDCIKMLV- 136
Query: 124 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA 173
GNKID + + RTV+ ++ A+ G + + E+SAK NVE FE +A
Sbjct: 137 GNKIDKE--DERTVTREEGLAFAEESGCL-FLESSAKTRDNVEKCFEELA 183
>Os06g0714600 Ras GTPase family protein
Length = 225
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
+ KV+++GDS VGKT L+ ++ +F K+TIG +F T+ V+I + QIWDTAGQ
Sbjct: 7 VFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKI 127
ER++++ A+YRGA +LVYDV +SF W + A S +++GNK
Sbjct: 67 ERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNS----IVVMLIGNKA 122
Query: 128 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
D+ + A A + + E SA G NVE AF + R
Sbjct: 123 DL---SHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLR 166
>Os03g0146000 Similar to RAB1X
Length = 210
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Query: 9 LKVIILGDSGVGKTSLMNQYVN-KKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
K++++GDS VGK+SL+ +V+ ++ TIG DF K + ++ + L IWDTAGQ
Sbjct: 13 FKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQ 72
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERL-NSWREEFLIQASPSDPENFPFVVLGNK 126
ERF+ + ++YRGA +LVYDV +SF L + W +E I+ ++ E +V GNK
Sbjct: 73 ERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKE--IELHSTNKECIKMLV-GNK 129
Query: 127 IDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA 173
VD R V+ ++ A+ G + + E+SAK NVE FE +A
Sbjct: 130 --VDKNEERMVTREEGLAFAQESGCL-FLESSAKTRENVEKCFEELA 173
>Os07g0195100 Similar to Ras-related protein ARA-3
Length = 273
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQERFQSLGVAFY 78
+GK+ L+ ++ + F+ + TIG DF + V++D + LQIWDTAGQERF+++ A+Y
Sbjct: 84 IGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDTAGQERFRTITTAYY 143
Query: 79 RGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDVDGGNSRTVS 138
RGA +LVYDV SF + +W AS +N +++GNK+D+D R VS
Sbjct: 144 RGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKVDMD--TKRVVS 197
Query: 139 EKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYL---PDTIDVG- 194
+ + G + +FETSAK NVE F IAR+ IK E + P TI +
Sbjct: 198 TAQGQKLADEYG-MKFFETSAKTNQNVEQVFFTIARD-IKQRLTETVAAAAEPPTIQISR 255
Query: 195 ----GAGRQQRSSGC 205
A R S C
Sbjct: 256 QEPDQAAASSRWSAC 270
>Os10g0208000
Length = 355
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
K + +GD+GVGK+ L+ Q+ +K+F T G ++ V +D + LQIWDTAGQE
Sbjct: 9 FKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQE 68
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
F+ + ++YRG C+LVYD+ SW E+ AS +++GNK D
Sbjct: 69 AFRCITRSYYRGNAACLLVYDI---------TSWLEDATQHASA----RMTIILIGNKCD 115
Query: 129 VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEEEIYLP 188
+ + R VS ++ + + G + + E SAK NVE AF AR K + I L
Sbjct: 116 L--SHRRVVSYQEGEQFAKEHG-LLFMEASAKTAHNVEKAFILAARTVHKKIEDGVINLL 172
Query: 189 D 189
D
Sbjct: 173 D 173
>Os05g0574500 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 221
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQE 73
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
+F L +Y C ++++DV +++ + +W + EN P V+ GNK+D
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
Query: 129 VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
V +R V K+ K N+ Y+E SAK +N E F +AR
Sbjct: 129 V---KNRQVKAKQVTF--HRKKNLQYYEISAKSNYNFEKPFLYLAR 169
>Os01g0611100 Similar to GTP-binding nuclear protein Ran-2
Length = 221
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
K++I+GD G GKT+ + +++ +F +Y+ TIG + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
+F L +Y C ++++DV +++ + +W + EN P V+ GNK+D
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD 128
Query: 129 VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
V +R V K+ K N+ Y+E SAK +N E F +AR
Sbjct: 129 V---KNRQVKAKQVTF--HRKKNLQYYEVSAKSNYNFEKPFLYLAR 169
>Os06g0600301 Similar to GTP-binding nuclear protein Ran1B (Fragment)
Length = 226
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
K+I++GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE
Sbjct: 18 FKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQE 77
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
+F L +Y C ++++DV +++ + +W ++ +N P V+ GNK+D
Sbjct: 78 KFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVC-----DNIPIVLCGNKVD 132
Query: 129 VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
+ +R V K K N+ Y+E SAK +N E F +AR
Sbjct: 133 M---KNRQVKAKMVTF--HRKKNLQYYEISAKSNYNFEKPFLYLAR 173
>AK111978
Length = 225
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
K+I++GD G GKT+ + +++ +F +Y AT+G D + + WDTAGQE
Sbjct: 23 FKLILVGDGGTGKTTFVKRHLTGEFEKRYIATVGVDVHPLHFHTNCGMICFNCWDTAGQE 82
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
+F L +Y C ++++DV ++ + +W + + + P V++GNK+D
Sbjct: 83 KFGGLRDGYYIQGQCAIIMFDVTSRNTYRSVPNWYRDIVRVC-----DVIPMVLVGNKVD 137
Query: 129 VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR 174
R V K K + Y++ SAK +N E F +A+
Sbjct: 138 ---APDRAVKAKMIT--FHRKKTLQYYDISAKTNYNFEKPFLWLAK 178
>Os05g0513800 Small GTP-binding protein OsRac2
Length = 214
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
+K + +GD VGKT ++ Y + KF Y T+ +F + V +D + L +WDTAGQ
Sbjct: 7 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVSVDGNIVNLGLWDTAGQ 65
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFER-LNSWREEFLIQASPSDPENFPFVVLGNK 126
E + L YRGAD VL + + S+E L W E L + +P N P V++G K
Sbjct: 66 EDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPE-LRRFAP----NVPIVLVGTK 120
Query: 127 IDVDGGNSRTVSEKKAKAWCASKGN--------IPYFETSAKEGFNVEAAFE 170
+D+ S A A ++G Y E S+K N++A F+
Sbjct: 121 LDLRDHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVFD 172
>Os06g0234200 Similar to RAC-like GTP binding protein ARAC8 (GTPase protein
ROP10)
Length = 215
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
MAS +K + +GD VGKT ++ Y + KF Y T+ +F + V +D L
Sbjct: 1 MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNF-SANVVVDGTTVNLG 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFER-LNSWREEFLIQASPSDPENFP 119
+WDTAGQE + L YRGAD VL + + S+E + W E L +P P
Sbjct: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPE-LQHYAP----GVP 114
Query: 120 FVVLGNKID--------VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFEC 171
V++G K+D +D + V+ + + G Y E S+K NV+A F+
Sbjct: 115 IVLVGTKLDLREDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVFDA 174
Query: 172 IARNAIK 178
+ IK
Sbjct: 175 AIKVVIK 181
>Os06g0687100 Ras GTPase family protein
Length = 98
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%)
Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQERFQ 71
++LGD G GKTS++ ++ + + ++TIGA F ++ + +D+ L IWDTAGQER+
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYH 68
Query: 72 SLGVAFYRGADCCVLVYDVNVT 93
SL +YRGA V+VYD++ T
Sbjct: 69 SLAPMYYRGAAAAVVVYDISST 90
>Os02g0742200 Small GTP-binding protein OsRac3
Length = 214
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
MAS +K + +GD VGKT ++ Y + KF Y T+ +F + V +D L
Sbjct: 1 MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVVVDSTTVNLG 59
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFER-LNSWREEFLIQASPSDPENFP 119
+WDTAGQE + L YRGAD VL + + S+E + W E L +P P
Sbjct: 60 LWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPE-LQHYAP----GVP 114
Query: 120 FVVLGNKID--------VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFEC 171
V++G K+D +D V+ + + G Y E S+K NV+ F+
Sbjct: 115 IVLVGTKLDLREDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFDA 174
Query: 172 IARNAIK 178
+ I+
Sbjct: 175 AIKVVIQ 181
>Os01g0229400 Small GTP-binding protein OsRac1
Length = 214
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
+K + +GD VGKT ++ Y KF Y T+ +F + V +D + L +WDTAGQ
Sbjct: 10 FIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGQ 68
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLN-SWREEFLIQASPSDPENFPFVVLGNK 126
E + L YRGAD +L + + S+E + W E L + +P P V++G K
Sbjct: 69 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPE-LRRFAP----GVPVVLVGTK 123
Query: 127 IDV--------DGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIK 178
+D+ D S ++ ++ + G + Y E S+K N++A F+ + ++
Sbjct: 124 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 183
Query: 179 NEPEEEI 185
+++
Sbjct: 184 PPRHKDV 190
>Os02g0312600 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
+K + +GD VGKT ++ Y + F Y T+ +F + V +D L +WDTAGQ
Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQ 64
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLN-SWREEFLIQASPSDPENFPFVVLGNK 126
E + L YRGAD +L + + S+E ++ W E L +P N P V++G K
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPE-LRHYAP----NVPIVLVGTK 119
Query: 127 ID--------VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFE 170
+D +D +S + + G Y E S+K NV++ F+
Sbjct: 120 LDLREDKQFFLDHPGLAPISTAQGEELKRMIGAAAYIECSSKTQQNVKSVFD 171
>Os02g0120800 Similar to Small GTP-binding protein (Fragment)
Length = 197
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V +D L
Sbjct: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLG 57
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLN-SWREEFLIQASPSDPENFP 119
+WDTAGQE + L YRGAD +L + + S+E ++ W E L +P P
Sbjct: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPE-LKHYAP----GVP 112
Query: 120 FVVLGNKID--------VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFE 170
+++G K+D VD + ++ + + G Y E S+K NV+ F+
Sbjct: 113 IILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFD 171
>AK107227
Length = 227
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQERFQSLGVAFYRG 80
K++L Q+V F + Y TI D K + ID + ++I DTAG E+F +L + +
Sbjct: 16 KSALTVQFVRNVFVSTYDPTI-EDTYRKMLVIDGQQCMVEILDTAGTEQFLALKELYIKS 74
Query: 81 ADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKIDV--DGGNSRTVS 138
+LV+ + S L RE + D P V++GNK D+ D R V
Sbjct: 75 GQGFILVFSLTSLASVNELGPLREAIV---RIKDTTAIPLVLVGNKSDLRADRQVPREVG 131
Query: 139 EKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAR-----NAIKNEP 181
+KAW GN+P++E SA++ NV+ F + R AI + P
Sbjct: 132 TSLSKAW----GNVPFYEASARKRINVDEIFADVVRQIRAFQAINSRP 175
>AK100585
Length = 197
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQ 60
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V +D L
Sbjct: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLG 57
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLN-SWREEFLIQASPSDPENFP 119
+WDTAGQE + L YRGAD +L + + S+E ++ W E L +P P
Sbjct: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPE-LKHYAP----GVP 112
Query: 120 FVVLGNKID--------VDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFE 170
+++G K+D VD ++ + + G Y E S+K NV+ F+
Sbjct: 113 IILVGTKLDLRDDKQFFVDHPGVVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFD 171
>AK104720
Length = 164
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 57 FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNS-WREEFLIQASPSDP 115
L IWDTAGQERF++L ++YRGA ++VYDV ++F L+ W +E + ++ D
Sbjct: 16 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDC 75
Query: 116 ENFPFVVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFE 170
+++GNK+D + + R V++K+ + G + + E SAK NVE FE
Sbjct: 76 IK---MLVGNKVDKE--SERAVTKKEGIEFAREYGCL-FLECSAKTKVNVEQCFE 124
>AK110439
Length = 508
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQERFQSLGVAFYRG 80
K+++ Q++ F Y TI D K ID + + I DTAGQE + ++ + G
Sbjct: 329 KSAITIQFIQGLFVEDYDPTI-EDSYRKTCTIDGLVTVIDILDTAGQEEYAAMRDTYIAG 387
Query: 81 ADCCVLVYDVNVTKSFERLNSWREEFL-IQASPSDPENFPFVVLGNKIDVDGGNSRTVSE 139
+ +L Y +N S+E S+ ++ L I+ D ++FP V++ NK D++ R V E
Sbjct: 388 GESFLLTYAINSLHSYEETASFYKQILRIK----DCDSFPIVLVANKCDLE--KQRQVPE 441
Query: 140 KKAKAWCASKGNIPYFETSAKEGFNVEAAF 169
++A+ A + + +FETSA N+E F
Sbjct: 442 EQARQQ-AKQWKVQFFETSAYMKINIEEIF 470
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,853,834
Number of extensions: 263750
Number of successful extensions: 965
Number of sequences better than 1.0e-10: 58
Number of HSP's gapped: 910
Number of HSP's successfully gapped: 58
Length of query: 207
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 111
Effective length of database: 12,023,257
Effective search space: 1334581527
Effective search space used: 1334581527
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)