BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0130000 Os06g0130000|AK119321
(487 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0130000 Similar to Tobacco mosaic virus helicase domai... 877 0.0
Os01g0757400 Similar to Katanin p60 ATPase-containing subun... 258 5e-69
Os01g0673500 Similar to Katanin p60 ATPase-containing subun... 250 1e-66
Os01g0683100 Similar to Katanin p60 ATPase-containing subun... 246 3e-65
Os01g0226400 AAA ATPase domain containing protein 235 6e-62
Os01g0141300 231 9e-61
Os06g0225900 AAA ATPase domain containing protein 224 9e-59
Os06g0714500 AAA ATPase domain containing protein 221 8e-58
Os05g0584600 AAA ATPase domain containing protein 220 2e-57
Os07g0672500 SMAD/FHA domain containing protein 217 1e-56
Os03g0344700 AAA ATPase domain containing protein 210 2e-54
Os01g0623500 AAA ATPase domain containing protein 210 2e-54
Os08g0413000 Similar to Valosin-containing protein (Fragment) 176 3e-44
AK109969 169 3e-42
Os03g0151800 Similar to Cell division control protein 48 ho... 166 4e-41
Os02g0205300 Similar to TAT-binding protein homolog (Fragment) 164 1e-40
AK119311 164 1e-40
Os03g0298400 Similar to 26S proteasome subunit 4-like prote... 164 2e-40
Os06g0600100 Similar to TAT-binding protein homolog (Fragment) 162 4e-40
Os07g0691800 Similar to 26S proteasome subunit 4-like prote... 161 8e-40
Os02g0803700 Similar to 26S protease regulatory subunit 6A ... 160 3e-39
Os06g0173100 Similar to 26S protease regulatory subunit 6A ... 159 4e-39
Os11g0661400 AAA ATPase, central region domain containing p... 157 1e-38
Os04g0617600 Similar to Cdc48 cell division control protein... 157 2e-38
Os02g0199900 Similar to 26S proteasome regulatory complex s... 157 2e-38
Os02g0325100 Similar to 26S protease regulatory subunit 6B ... 155 8e-38
Os06g0607800 Similar to 26S proteasome regulatory complex s... 153 3e-37
Os09g0515100 Similar to Cdc48 cell division control protein... 149 3e-36
Os04g0284600 Similar to TAT-binding protein 1 (Fragment) 148 9e-36
AK110388 147 3e-35
Os04g0498800 Similar to Cell division control protein 48 ho... 146 3e-35
Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.... 146 4e-35
AK110513 146 4e-35
Os01g0574500 Peptidase M41, FtsH domain containing protein 143 3e-34
Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependen... 143 3e-34
Os06g0109400 AAA ATPase domain containing protein 142 4e-34
Os05g0458400 Similar to AAA-metalloprotease FtsH 140 3e-33
Os02g0649700 Peptidase M41, FtsH extracellular domain conta... 139 4e-33
Os01g0842600 Similar to AAA-metalloprotease FtsH 138 8e-33
Os06g0725900 Similar to Cell division protein ftsH homolog,... 137 2e-32
AK110158 137 3e-32
Os06g0192600 26S proteasome regulatory particle triple-A AT... 135 7e-32
Os09g0560200 Similar to 26S protease regulatory subunit 6B ... 132 8e-31
AK119842 130 2e-30
Os05g0376200 Similar to Cell division control protein 48 ho... 130 3e-30
Os02g0784700 Similar to 26S protease regulatory subunit 7 (... 122 4e-28
Os02g0740300 AAA ATPase domain containing protein 119 6e-27
Os06g0229066 Twin-arginine translocation pathway signal dom... 118 1e-26
Os05g0519400 Similar to N-ethylmaleimide sensitive factor N... 100 3e-21
Os12g0443800 AAA ATPase, central region domain containing p... 77 2e-14
Os02g0749150 AAA ATPase, central region domain containing p... 77 3e-14
Os04g0479000 Similar to HPV16 E1 protein binding protein (T... 72 1e-12
Os10g0442600 Similar to Cell division control protein 48 ho... 69 6e-12
>Os06g0130000 Similar to Tobacco mosaic virus helicase domain-binding protein
(Fragment)
Length = 487
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/448 (96%), Positives = 433/448 (96%)
Query: 40 ERVAVKLRGYFELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLEAKAARVPDAVSSSE 99
ERVAVKLRGYFELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLEAKAARVPDAVSSSE
Sbjct: 40 ERVAVKLRGYFELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLEAKAARVPDAVSSSE 99
Query: 100 RGQVRVYQEKIAKWQTQVEERLRVLGQRSGAAAXXXXXXXXXXXXXXXDRAASTSFHRPT 159
RGQVRVYQEKIAKWQTQVEERLRVLGQRSGAAA DRAASTSFHRPT
Sbjct: 100 RGQVRVYQEKIAKWQTQVEERLRVLGQRSGAAAPVPKKVVTNNPVNRNDRAASTSFHRPT 159
Query: 160 SQPSPTFNRGGQASSHQKSSSGGAKPVQRAGANYDDKLVEMINTTIVDRSPAVKWEDVAG 219
SQPSPTFNRGGQASSHQKSSSGGAKPVQRAGANYDDKLVEMINTTIVDRSPAVKWEDVAG
Sbjct: 160 SQPSPTFNRGGQASSHQKSSSGGAKPVQRAGANYDDKLVEMINTTIVDRSPAVKWEDVAG 219
Query: 220 LDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNV 279
LDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNV
Sbjct: 220 LDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNV 279
Query: 280 SASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDASRRLKSEFL 339
SASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDASRRLKSEFL
Sbjct: 280 SASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDASRRLKSEFL 339
Query: 340 IQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKTQLKGQS 399
IQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKTQLKGQS
Sbjct: 340 IQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKTQLKGQS 399
Query: 400 FKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLKYEDFK 459
FKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLKYEDFK
Sbjct: 400 FKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLKYEDFK 459
Query: 460 KAMTVIRPSLQKSKWDELEKWNEEFGSS 487
KAMTVIRPSLQKSKWDELEKWNEEFGSS
Sbjct: 460 KAMTVIRPSLQKSKWDELEKWNEEFGSS 487
>Os01g0757400 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 386
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 197/302 (65%), Gaps = 19/302 (6%)
Query: 197 LVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGP 256
L E + I+ SP VKWE + GL+ AK+ L E V++P K FTGL P +G+LLFGP
Sbjct: 84 LAETLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 143
Query: 257 PGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEI 316
PG GKTMLAKAVA+E + TFFN+SASS+ SKW G++EKLV+ LF +A PS IF+DEI
Sbjct: 144 PGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEI 203
Query: 317 DSVMSAR--LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLV 374
D+++S R +E++ASRRLK+E LIQ DG+T +DLV V+ ATN P ELD A+LRRL
Sbjct: 204 DAIISQRGEARSEHEASRRLKTELLIQMDGLTKT-NDLVFVLAATNLPWELDAAMLRRLE 262
Query: 375 KRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPI 434
KRI VPLP+ R + + L + KL + L TEGYSGSD+R +C+EAAM P+
Sbjct: 263 KRILVPLPEAEARHAMFEELLPSTTSKLEV-PYDTLVEKTEGYSGSDIRLVCKEAAMQPL 321
Query: 435 RELGPQNILTIK--------ANQLRPLKYEDFKKAMTVIRPS--LQKSKWDELEKWNEEF 484
R L ++L + ++ PLK ED + A+ RPS L ++ EK+N+++
Sbjct: 322 RRL--MSVLEARDELVPEEELPEVGPLKPEDIEVALRNTRPSAHLHAHRY---EKFNQDY 376
Query: 485 GS 486
GS
Sbjct: 377 GS 378
>Os01g0673500 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 370
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 196/301 (65%), Gaps = 17/301 (5%)
Query: 197 LVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGP 256
L E + I+ SP VKWE + GL+ AK+ L E V++P K F GL P +G+LLFGP
Sbjct: 72 LAETLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGLLSPWKGILLFGP 131
Query: 257 PGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEI 316
PG GKTMLAKAVA+E + TFFN+SASS+ SKW G++EKLV+ LF +A PS IF+DEI
Sbjct: 132 PGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEI 191
Query: 317 DSVMSAR--LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLV 374
D+++S R +E++ASRRLK+E LIQ DG+T DDLV V+ ATN P ELD A+LRRL
Sbjct: 192 DAIISQRGEARSEHEASRRLKTELLIQMDGLTKT-DDLVFVLAATNLPWELDAAMLRRLE 250
Query: 375 KRIYVPLPDPNVRRLLLKTQLKGQSFKLS-SHDLERLAADTEGYSGSDLRALCEEAAMMP 433
KRI VPLP+ R + + L ++ +D+ L TEGYSGSD+R +C+EAAM P
Sbjct: 251 KRILVPLPEQEARHAMFEELLPSVPGTMNIPYDV--LVEKTEGYSGSDIRLVCKEAAMQP 308
Query: 434 IREL-----GPQ-NILTIKANQLRPLKYEDFKKAMTVIRPS--LQKSKWDELEKWNEEFG 485
+R L G Q + + ++ P+ ED + A+ RPS L ++ EK+N+++G
Sbjct: 309 LRRLMSVLEGRQEEVPEDELPEVGPVTTEDIELALRNTRPSAHLHVHRY---EKFNQDYG 365
Query: 486 S 486
S
Sbjct: 366 S 366
>Os01g0683100 Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3)
(Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
(Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
(AtAAA1)
Length = 519
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 208/320 (65%), Gaps = 16/320 (5%)
Query: 181 GGAKPVQRAGANYDDKLVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDL 240
G +K Q G + D L M+ ++D +P V+W+DVAGL +AK+ L E V+LP +
Sbjct: 203 GKSKKGQYEGPDMD--LAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEY 260
Query: 241 FTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLF 300
F G+RRP +G+L+FGPPG GKT+LAKAVA+E TFFNVS+++L SKW GE+E++VR LF
Sbjct: 261 FQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLF 320
Query: 301 MVAVDRQPSVIFMDEIDSVMSARLAN-ENDASRRLKSEFLIQFDGV--TSNPDD----LV 353
+A PS IF+DEIDS+ ++R A+ E+++SRR+KSE L+Q DGV +S +D +V
Sbjct: 321 DLARFYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIV 380
Query: 354 IVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAAD 413
+V+ ATN P ++D+A+ RRL KRIY+PLP+ R+ L+ LK + D++ +A
Sbjct: 381 MVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKALININLKTVEVA-TDVDIDEVARR 439
Query: 414 TEGYSGSDLRALCEEAAMMPIRE----LGPQNILTIKANQLR--PLKYEDFKKAMTVIRP 467
TEGYSG DL +C +A+M +R I + +++ P+ DF++A+ ++
Sbjct: 440 TEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALAKVQK 499
Query: 468 SLQKSKWDELEKWNEEFGSS 487
S+ + ++ EKW EFGS+
Sbjct: 500 SVSPADIEKHEKWQAEFGSA 519
>Os01g0226400 AAA ATPase domain containing protein
Length = 840
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 186/300 (62%), Gaps = 26/300 (8%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFTG-LRRPARGLLLFGPPGNGKTMLAKAVA 269
V ++D+ L K++L E+V+LP +R DLF G L +P RG+LLFGPPG GKTMLAKA+A
Sbjct: 528 GVTFDDIGALSDIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIA 587
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSAR-LANEN 328
+E++A+F NVS S++TSKW GE EK VR LF +A P++IF+DE+DS++ R A E+
Sbjct: 588 NEAQASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRNRAGEH 647
Query: 329 DASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRR 388
+A R++K+EF+ +DG+ S PD ++V+ ATN+P +LD+A++RR +RI V LP R
Sbjct: 648 EAMRKIKNEFMTHWDGLLSRPDQKILVLAATNRPFDLDEAIIRRFERRIMVGLPSLESRE 707
Query: 389 LLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIREL----------- 437
L+L++ L + D + LA TEGYSGSDL+ LC AA P+REL
Sbjct: 708 LILRSLLSKEKVD-GGLDYKELATMTEGYSGSDLKNLCTTAAYRPVRELIQKERKKELEK 766
Query: 438 ------GPQNILTIKANQ----LRPLKYEDFKKAMTVIRPSL--QKSKWDELEKWNEEFG 485
+ +K LRPL +D K+A + S + + EL++WNE +G
Sbjct: 767 KREQGGNASDASKMKEKDETIILRPLNMKDLKEAKNQVAASFAAEGTIMGELKQWNELYG 826
>Os01g0141300
Length = 448
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 156/238 (65%), Gaps = 2/238 (0%)
Query: 200 MINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGN 259
M+ + IV P+VKW DVAGL+ AK+AL E ILP K FTG R P + LL+GPPG
Sbjct: 94 MLRSAIVAAKPSVKWSDVAGLESAKEALQEAAILPIKFPHFFTGKRSPWKAFLLYGPPGT 153
Query: 260 GKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSV 319
GK+ LA+AVA+E ++TFF++S+S L SKW+GE+EKLV LF +A + PS+IF+DEIDS+
Sbjct: 154 GKSYLAEAVATEVDSTFFSISSSDLVSKWMGESEKLVANLFQMARENAPSIIFIDEIDSL 213
Query: 320 MSAR-LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIY 378
R NEN+ASRR+K+E L+Q G N +D V+V+ ATN P LD A+ RR K IY
Sbjct: 214 CGQRGECNENEASRRIKTELLVQMQGF-DNSNDKVLVLAATNMPHVLDQAMRRRFDKCIY 272
Query: 379 VPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
+PLPD R+ K + L+ D LA TEG+SGSD+ ++A P+R+
Sbjct: 273 IPLPDLKARKDTFKIHIGDTPHSLTEGDFVSLAYQTEGFSGSDIAVCVKDALFQPVRK 330
>Os06g0225900 AAA ATPase domain containing protein
Length = 271
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 173/257 (67%), Gaps = 8/257 (3%)
Query: 236 KRRDLFT--GLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAE 293
+R +LF+ L RP +G+LLFGPPG GKT+LAKA+A+E+ A F +++ S+LTSKW G+AE
Sbjct: 2 RRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSNLTSKWFGDAE 61
Query: 294 KLVRTLFMVAVDRQPSVIFMDEIDSVMSAR-LANENDASRRLKSEFLIQFDGVTSNPDDL 352
KL + LF A P +IF+DE+DS++ AR A E++A+RR+++EF+ +DG+ S +
Sbjct: 62 KLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQR 121
Query: 353 VIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAA 412
++++GATN+P +LDDAV+RRL +RIYV LPD R +LK L ++ + S + LA
Sbjct: 122 ILILGATNRPFDLDDAVIRRLPRRIYVDLPDSQNRMKILKILLAKENLE-SDFRFDELAN 180
Query: 413 DTEGYSGSDLRALCEEAAMMPIRELGPQNILTIKANQ--LRPLKYEDFKKAMTVIRPS-- 468
TEGYSGSDL+ LC AA P+ EL + + + LRPLK EDF +A + PS
Sbjct: 181 ATEGYSGSDLKNLCIAAAYRPVHELLEEEKGGVSGTKISLRPLKLEDFVQAKAKVSPSVA 240
Query: 469 LQKSKWDELEKWNEEFG 485
+ +EL KWNE++G
Sbjct: 241 FDATSMNELRKWNEQYG 257
>Os06g0714500 AAA ATPase domain containing protein
Length = 393
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 182/277 (65%), Gaps = 8/277 (2%)
Query: 193 YDDKL-VEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFT--GLRRPAR 249
Y+D + ++IN +D V+++ + GLD KQAL E+VILP +R +LFT L P +
Sbjct: 65 YEDVIACDVINPDHID----VEFDSIGGLDHVKQALYELVILPLRRPELFTFGKLLSPQK 120
Query: 250 GLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPS 309
G+LL+GPPG GKTMLAKA+A ES A F NV S+L SKW G+A+KLV +F +A QP+
Sbjct: 121 GVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVSAVFSLAHKLQPA 180
Query: 310 VIFMDEIDSVMSARLANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAV 369
+IF+DE+DS + R +++A +K+EF+ +DG T++ + V+V+ ATN+P ELD+A+
Sbjct: 181 IIFIDEVDSFLGQRRTTDHEAMTNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAI 240
Query: 370 LRRLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEA 429
LRR + + +P + R +L+ LKG++ + + + + +A EG++GSD+ LC++A
Sbjct: 241 LRRFTQIFEIGIPVQSERSKILRVVLKGENVE-PNINYDYIAGLCEGFTGSDILELCKQA 299
Query: 430 AMMPIRELGPQNILTIKANQLRPLKYEDFKKAMTVIR 466
A PIREL KA++ RPL+ D +KA++ R
Sbjct: 300 AFYPIRELLNNEKDGRKADKPRPLRQSDLEKALSTSR 336
>Os05g0584600 AAA ATPase domain containing protein
Length = 855
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFTG-LRRPARGLLLFGPPGNGKTMLAKAVA 269
V ++D+ L K++L E+V+LP +R DLF G L +P RG+LLFGPPG GKTMLAKA+A
Sbjct: 497 GVTFDDIGALADIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIA 556
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARL-ANEN 328
+++ A+F NVS S++TSKW GE EK VR LF +A P++IF+DE+DS++ R E+
Sbjct: 557 NDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEH 616
Query: 329 DASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRR 388
+A R++K+EF+ +DG+ S + ++V+ ATN+P +LD+A++RR +RI V LP + R
Sbjct: 617 EAMRKIKNEFMSHWDGLLSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTLDSRE 676
Query: 389 LLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIREL 437
L+L+T L + D + LA TEGYSGSDL+ LC AA P+REL
Sbjct: 677 LILRTLLSKEKVA-EDIDYKELATMTEGYSGSDLKNLCVTAAYRPVREL 724
>Os07g0672500 SMAD/FHA domain containing protein
Length = 1081
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 181/298 (60%), Gaps = 28/298 (9%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFTG--LRRPARGLLLFGPPGNGKTMLAKAV 268
V +ED+ L+ K+ L E+V+LP +R +LF+ L +P +G+LLFGPPG GKTMLAKAV
Sbjct: 775 GVTFEDIGALENVKETLKELVMLPLQRPELFSKGQLMKPCKGILLFGPPGTGKTMLAKAV 834
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARL-ANE 327
A+E+ A F N+S SS+ SKW GE EK V+ +F +A PSVIF+DE+D ++ R E
Sbjct: 835 ATEAGANFINISMSSIASKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDGMLGRRENPGE 894
Query: 328 NDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVR 387
++A R++K+EF++ +DG+ + + V+V+ ATN+P +LD+AV+RRL +R+ V LPD + R
Sbjct: 895 HEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDASNR 954
Query: 388 RLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE----------- 436
+ +L L + DLE LA T+GYSGSD++ LC AA PIRE
Sbjct: 955 KKILSVILAKEDLA-DDVDLEALANLTDGYSGSDMKNLCVTAAHCPIREILEREKKERAS 1013
Query: 437 -------LGPQNILTIKANQLRPLKYEDFKKAMTVIRPSLQKSKWD--ELEKWNEEFG 485
L P ++ +R L+ DFK A + S+ + EL +WN+ +G
Sbjct: 1014 AEAENKPLPPPR----SSSDVRSLRMNDFKHAHEQVCASITSDSRNMTELIQWNDLYG 1067
>Os03g0344700 AAA ATPase domain containing protein
Length = 666
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 187/297 (62%), Gaps = 26/297 (8%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFT--GLRRPARGLLLFGPPGNGKTMLAKAV 268
V +ED+ L+ K+ L E+V+LP +R +LF+ L +P +G+LLFGPPG GKTMLAKAV
Sbjct: 360 GVTFEDIGALESVKETLKELVMLPLQRPELFSRGQLMKPCKGILLFGPPGTGKTMLAKAV 419
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARL-ANE 327
A+E+ A F N+S SS++SKW GE EK V+ +F +A PSVIF+DE+D ++ R E
Sbjct: 420 ATEAGANFINISMSSISSKWFGEGEKFVKAVFSLASKIAPSVIFVDEVDGMLGRRENPGE 479
Query: 328 NDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVR 387
++A R++K+EF++ +DG+ + + V+V+ ATN+P +LD+AV+RRL +R+ V LPD + R
Sbjct: 480 HEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDASNR 539
Query: 388 RLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIREL---------- 437
R +L L + DLE +A+ TEGYSGSDL+ LC AA +PI+++
Sbjct: 540 RKILSVILAKEDLA-DDVDLEAVASLTEGYSGSDLKNLCITAAHLPIKDILEKEKKEKAL 598
Query: 438 -------GPQNILTIKANQLRPLKYEDFKKAMTVIRPSL--QKSKWDELEKWNEEFG 485
PQ + +N +R L+ DFK A + S+ + +EL +WN+ +G
Sbjct: 599 AEAENRPLPQ---SFSSNDVRALRLSDFKHAHEQVCASVSSDSTNMNELIQWNDLYG 652
>Os01g0623500 AAA ATPase domain containing protein
Length = 812
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 162/237 (68%), Gaps = 4/237 (1%)
Query: 203 TTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTG-LRRPARGLLLFGPPGNGK 261
T I V ++D+ L K+ L E+V+LP +R D F G L +P +G+LLFGPPG GK
Sbjct: 457 TVIPANEIGVTFDDIGALADIKECLHELVMLPLQRPDFFKGGLLKPCKGVLLFGPPGTGK 516
Query: 262 TMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMS 321
TMLAKA+A+ + A+F N+S +S+TSKW GE+EK ++ LF +A P++IF+DE+DS++
Sbjct: 517 TMLAKALANAAGASFLNISMASMTSKWYGESEKCIQALFSLAAKLAPAIIFIDEVDSMLG 576
Query: 322 AR-LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVP 380
R +EN+ASRR+K+EF+ +DG+ S ++ ++V+ ATN+P +LDDAV+RR RI V
Sbjct: 577 KRDNHSENEASRRVKNEFMAHWDGLLSKSNERILVLAATNRPFDLDDAVIRRFEHRIMVG 636
Query: 381 LPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIREL 437
LP R L+LKT L ++ + + D + LA TEGY+ SDL+ +C AA P+REL
Sbjct: 637 LPTLESRELILKTLLSKET--VENIDFKELAKMTEGYTSSDLKNICVTAAYHPVREL 691
>Os08g0413000 Similar to Valosin-containing protein (Fragment)
Length = 848
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 167/292 (57%), Gaps = 16/292 (5%)
Query: 203 TTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFT--GLRRPARGLLLFGPPGNG 260
T IV+ P V W+D+ GL + K+ L E V P + ++F G+ P+RG+L +GPPG G
Sbjct: 478 TGIVE-VPKVSWDDIGGLGEVKRELQETVQYPVEHPEMFDLFGMS-PSRGVLFYGPPGCG 535
Query: 261 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVM 320
KTM+AKA+A E +A F ++ L + W GE+E VR LF A P ++F DE+DS+
Sbjct: 536 KTMMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDKARQSAPCILFFDELDSIA 595
Query: 321 SARLANENDAS---RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVK 375
R + DA R+ ++ L + DG+ N V VIGATN+P +D A+LR RL +
Sbjct: 596 VKRGNSVGDAGGTPDRVLNQLLTEMDGI--NAKKTVFVIGATNRPDIIDPAMLRPGRLDQ 653
Query: 376 RIYVPLPDPNVRRLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAMMPI 434
IY+PLPD + R + + L+ +S H DL +AA T+G+SG+D++ +C+ A + +
Sbjct: 654 LIYIPLPDASSRLEIFRANLR--KAPMSRHVDLPAMAASTDGFSGADIKEICQRACKLAV 711
Query: 435 RELGPQNILTIKANQL--RPLKYEDFKKAMTVIRPSLQKSKWDELEKWNEEF 484
RE+ ++ L KA + L + FK AM R S+ + + E + +F
Sbjct: 712 REVVQKSTLVGKALAMAGAELTVDHFKSAMKHARKSVSELDVIKYEYFKHKF 763
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 155/288 (53%), Gaps = 24/288 (8%)
Query: 214 WEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASES 272
++DV G+ K + E+V LP + LF L RP +G+LL+GPPG GKT+LA+A+A+ES
Sbjct: 214 YDDVGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAES 273
Query: 273 EATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDASR 332
A F V+ + S GE+E +R +F A PS++FMDEIDS+ +R + R
Sbjct: 274 GAHFVVVNGPEIMSGMPGESEANLRAVFAEADAAAPSIVFMDEIDSIAPSREKAHGEVER 333
Query: 333 RLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLL 390
R+ S+ L DG+ P VIVIGATN+P LD A+ R R + + + +PD R +
Sbjct: 334 RVVSQLLTLMDGL--RPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEI 391
Query: 391 LKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNILTIKANQL 450
L+ K DLER+ DT G+ GSDL +LC EAAM IRE +I+ I+ + +
Sbjct: 392 LRIHTKNMPLS-DDVDLERVGKDTHGFVGSDLASLCSEAAMQCIRE--KLDIIDIENDTI 448
Query: 451 R-------PLKYEDFKKAMTVIRPS---------LQKSKWDELEKWNE 482
+ + K AM V +PS + K WD++ E
Sbjct: 449 DVEILNSLTVTMDHLKFAMEVTKPSALRETGIVEVPKVSWDDIGGLGE 496
>AK109969
Length = 882
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 9/233 (3%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAV 268
P W D+ GL+K KQ L E V P + + F P++G+L +GPPG GKT+LAKA+
Sbjct: 529 PTTTWNDIGGLEKVKQELQETVSYPVEHPEKFLKYGMAPSKGVLFYGPPGTGKTLLAKAI 588
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSAR---LA 325
A+E +A F ++ L + W GE+E VR +F A P V+F DE+D++ AR
Sbjct: 589 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVMFFDELDAIAKARGSSSG 648
Query: 326 NENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPD 383
+ A R+ ++ L + DGV+S + V +IGATN+P ++D A+LR RL + IY+PLPD
Sbjct: 649 DSGGAGDRVINQILTEMDGVSSRKN--VFIIGATNRPDQIDPAILRPGRLDQLIYIPLPD 706
Query: 384 PNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
R +LK LK +S + DL LA T G+SG+DL +C+ AA + IRE
Sbjct: 707 EPSRLSILKATLK-KSPIAADVDLTFLAKHTHGFSGADLAEICQRAAKLAIRE 758
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 161/282 (57%), Gaps = 15/282 (5%)
Query: 212 VKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVAS 270
V ++D+ G K + EMV LP + LF + +P RG+L++GPPG GKT++A+AVA+
Sbjct: 258 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLMYGPPGTGKTLMARAVAN 317
Query: 271 ESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDA 330
E+ A FF ++ + SK GE+E +R F A P++I++DEIDS+ R +
Sbjct: 318 ETRAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIYIDEIDSIAPKREKTNGEV 377
Query: 331 SRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRR 388
RR+ S+ L DG+ + + ++V+ ATN+P +D A+ R R + + + +PDP R
Sbjct: 378 ERRVVSQLLTLMDGLKARSN--IVVMAATNRPNSIDPALRRFGRFDREVDIAIPDPTGRL 435
Query: 389 LLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAMMPIRE---LGPQNILT 444
+L+ K + KL+ DLE++AA+T GY GSD+ ALC EAAM IRE L + T
Sbjct: 436 EILRIHTK--NMKLAEDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDT 493
Query: 445 IKANQLRPL--KYEDFKKAMTVIRPSLQKSKWDEL--EKWNE 482
I A L L E+F+ A+ V PS + E+ WN+
Sbjct: 494 IDAEVLDSLGVTMENFRFALGVSNPSALRETVVEVPTTTWND 535
>Os03g0151800 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 809
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 137/233 (58%), Gaps = 9/233 (3%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAV 268
P V WED+ GL+ K+ L E V P + + F P++G+L +GPPG GKT+LAKA+
Sbjct: 478 PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 537
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEN 328
A+E +A F +V L + W GE+E VR +F A P V+F DE+DS+ + R ++
Sbjct: 538 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG 597
Query: 329 D---ASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPD 383
D A+ R+ ++ L + DG+ N V +IGATN+P +D A+LR RL + IY+PLPD
Sbjct: 598 DAGGAADRVLNQLLTEMDGM--NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 655
Query: 384 PNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
R + K L+ +S DL LA T+G+SG+D+ +C+ A IRE
Sbjct: 656 DQSRLQIFKACLR-KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 707
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 155/273 (56%), Gaps = 17/273 (6%)
Query: 207 DRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLA 265
+R V ++DV G+ K + E+V LP + LF + +P +G+LL+GPPG+GKT++A
Sbjct: 202 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 261
Query: 266 KAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLA 325
+AVA+E+ A FF ++ + SK GE+E +R F A PS+IF+DEIDS+ R
Sbjct: 262 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 321
Query: 326 NENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPD 383
+ RR+ S+ L DG+ + VIV+GATN+P +D A+ R R + I + +PD
Sbjct: 322 THGEVERRIVSQLLTLMDGLKARSH--VIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 379
Query: 384 PNVRRLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNI 442
R +L+ K + KL+ DLE +A DT GY G+DL ALC EAA+ IRE +I
Sbjct: 380 EVGRLEVLRIHTK--NMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIRE--KMDI 435
Query: 443 L-----TIKANQLRPLKY--EDFKKAMTVIRPS 468
+ TI A L + + FK A+ PS
Sbjct: 436 IDLEDETIDAEILNSMAVTNDHFKTALGTSNPS 468
>Os02g0205300 Similar to TAT-binding protein homolog (Fragment)
Length = 424
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 151/245 (61%), Gaps = 12/245 (4%)
Query: 200 MINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLF--TGLRRPARGLLLFGPP 257
++N V++ P ++ + GLD+ + + E++ LP K +LF G+ +P +G+LL+GPP
Sbjct: 151 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPP 209
Query: 258 GNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEID 317
G GKT+LA+AVA ++ TF VS S L K++GE ++VR LF++A + PS+IFMDEID
Sbjct: 210 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 269
Query: 318 SVMSARL----ANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR-- 371
S+ SAR+ N + +R E L Q DG ++ + + V+ ATN+ LD A+LR
Sbjct: 270 SIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPG 327
Query: 372 RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAM 431
R+ ++I P P+ + R +LK + + + DL+++A G SG++L+A+C EA M
Sbjct: 328 RIDRKIEFPNPNEDSRFDILKIHSRKMNL-MRGIDLKKIAEKMNGASGAELKAVCTEAGM 386
Query: 432 MPIRE 436
+RE
Sbjct: 387 FALRE 391
>AK119311
Length = 805
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 136/233 (58%), Gaps = 9/233 (3%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAV 268
P W DV GL+ K+ L E+V P + D F +P+RG+L +GPPG GK +LAKA+
Sbjct: 470 PNATWADVGGLENVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKMLLAKAI 529
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEN 328
A+E +A F +V L + W GE+E VR +F A P V+F DE+DS+ +R N
Sbjct: 530 ANECQANFISVKGPELLTMWFGESEANVRDVFDKARSAAPCVLFFDELDSIAKSRGGNVG 589
Query: 329 D---ASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPD 383
D A+ R+ ++ L + DG+ + + V +IGATN+P +D A+LR RL + IY+PLPD
Sbjct: 590 DAGGAADRVINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 647
Query: 384 PNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
R + + ++ +S DL +A T G+SG+DL +C+ A + IR+
Sbjct: 648 EKSREAIFRANMR-KSPVADDVDLAYIAKVTHGFSGADLTEVCQRACKLAIRQ 699
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 155/269 (57%), Gaps = 17/269 (6%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVA 269
AV ++D+ G K + EMV LP + LF + +P RG+LL+GPPG GKT++A+AVA
Sbjct: 198 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 257
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEND 329
+E+ A FF ++ + SK GE+E +R F A PS+IF+DE+D++ R +
Sbjct: 258 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREKTHGE 317
Query: 330 ASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVR 387
RR+ S+ L DG+ + VIV+ ATN+P +D A+ R R + I + +PD R
Sbjct: 318 VERRIVSQLLTLMDGLKQSSH--VIVMAATNRPNSIDGALRRFGRFDREIDIGIPDATGR 375
Query: 388 RLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNILTIK 446
+L+ K + KL+ DLE++AA+T G+ G+DL +LC E+A+ IRE +++ ++
Sbjct: 376 LEILRIHTK--NMKLADDVDLEQIAAETHGHVGADLASLCSESALQQIRE--KMDLIDLE 431
Query: 447 ANQLR-------PLKYEDFKKAMTVIRPS 468
+Q+ + E+F+ AM PS
Sbjct: 432 DDQIDAEVLNSLAVTMENFRYAMGKSSPS 460
>Os03g0298400 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 450
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 146/249 (58%), Gaps = 11/249 (4%)
Query: 195 DKLVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLL 253
D++ M++ V+++P + D+ GLD Q + E V LP +L+ + RP +G++L
Sbjct: 175 DEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVIL 234
Query: 254 FGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFM 313
+G PG GKT+LAKAVA+ + ATF V S L K++G+ KLVR LF VA D PS++F+
Sbjct: 235 YGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFI 294
Query: 314 DEIDSVMSARLANENDASRRLKS---EFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVL 370
DEID+V + R + R ++ E L Q DG S D V VI ATN+ + LD A+L
Sbjct: 295 DEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD--VKVILATNRIESLDPALL 352
Query: 371 R--RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCE 427
R R+ ++I PLPD RR + Q+ L+ +LE + +SG+D++A+C
Sbjct: 353 RPGRIDRKIEFPLPDIKTRRRIF--QIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICT 410
Query: 428 EAAMMPIRE 436
EA ++ +RE
Sbjct: 411 EAGLLALRE 419
>Os06g0600100 Similar to TAT-binding protein homolog (Fragment)
Length = 423
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 151/245 (61%), Gaps = 12/245 (4%)
Query: 200 MINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLF--TGLRRPARGLLLFGPP 257
++N V++ P ++ + GLD+ + + E++ LP K +LF G+ +P +G+LL+GPP
Sbjct: 150 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPP 208
Query: 258 GNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEID 317
G GKT+LA+AVA ++ TF VS S L K++GE ++VR LF++A + PS+IFMDEID
Sbjct: 209 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 268
Query: 318 SVMSARLANENDAS----RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR-- 371
S+ SAR+ + + +R E L Q DG ++ + + V+ ATN+ LD A+LR
Sbjct: 269 SIGSARMQSGSGGGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRMDILDQALLRPG 326
Query: 372 RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAM 431
R+ ++I P P+ + R +LK + + + DL+++A G SG++L+A+C EA M
Sbjct: 327 RIDRKIEFPNPNEDSRFDILKIHSRKMNL-MRGIDLKKIAEKMNGASGAELKAVCTEAGM 385
Query: 432 MPIRE 436
+RE
Sbjct: 386 FALRE 390
>Os07g0691800 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 448
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 146/249 (58%), Gaps = 11/249 (4%)
Query: 195 DKLVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLL 253
D++ M++ V+++P + D+ GLD Q + E V LP +L+ + RP +G++L
Sbjct: 173 DEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVIL 232
Query: 254 FGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFM 313
+G PG GKT+LAKAVA+ + ATF V S L K++G+ KLVR LF VA + PS++F+
Sbjct: 233 YGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFI 292
Query: 314 DEIDSVMSARLANENDASRRLKS---EFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVL 370
DEID+V + R + R ++ E L Q DG S D V VI ATN+ + LD A+L
Sbjct: 293 DEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGD--VKVILATNRIESLDPALL 350
Query: 371 R--RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCE 427
R R+ ++I PLPD RR + Q+ L+ +LE + +SG+D++A+C
Sbjct: 351 RPGRIDRKIEFPLPDIKTRRRIF--QIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICT 408
Query: 428 EAAMMPIRE 436
EA ++ +RE
Sbjct: 409 EAGLLALRE 417
>Os02g0803700 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1)
Length = 429
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 20/268 (7%)
Query: 184 KPVQRAGANYDDKLV---------EMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILP 234
KP G N D L+ + VD P + D+ GL+K Q L+E ++LP
Sbjct: 136 KPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 195
Query: 235 TKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAE 293
+D F L RP +G+LL+GPPG GKT++A+A A+++ ATF ++ L ++G+
Sbjct: 196 MTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 255
Query: 294 KLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDASRRLKS---EFLIQFDGVTSNPD 350
KLVR F +A ++ P +IF+DEID++ + R +E R ++ E L Q DG +S D
Sbjct: 256 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--D 313
Query: 351 DLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSH-DL 407
+ + VI ATN+ LD A++R RL ++I P P R +L Q+ + ++ +
Sbjct: 314 ERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARIL--QIHSRKMNVNPDVNF 371
Query: 408 ERLAADTEGYSGSDLRALCEEAAMMPIR 435
E LA T+ ++G+ L+A+C EA M+ +R
Sbjct: 372 EELARSTDDFNGAQLKAVCVEAGMLALR 399
>Os06g0173100 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
(LEMA-1)
Length = 429
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 147/267 (55%), Gaps = 18/267 (6%)
Query: 184 KPVQRAGANYDDKLV---------EMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILP 234
KP G N D L+ + VD P + D+ GL+K Q L+E ++LP
Sbjct: 136 KPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLP 195
Query: 235 TKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAE 293
+D F L RP +G+LL+GPPG GKT++A+A A+++ ATF ++ L ++G+
Sbjct: 196 MTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 255
Query: 294 KLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDASRRLKS---EFLIQFDGVTSNPD 350
KLVR F +A ++ P +IF+DEID++ + R +E R ++ E L Q DG +S D
Sbjct: 256 KLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--D 313
Query: 351 DLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLE 408
+ + VI ATN+ LD A++R RL ++I P P R +L+ + + + E
Sbjct: 314 ERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVN-PDVNFE 372
Query: 409 RLAADTEGYSGSDLRALCEEAAMMPIR 435
LA T+ ++G+ L+A+C EA M+ +R
Sbjct: 373 ELARSTDDFNGAQLKAVCVEAGMLALR 399
>Os11g0661400 AAA ATPase, central region domain containing protein
Length = 241
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 135/228 (59%), Gaps = 18/228 (7%)
Query: 275 TFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARL-ANENDASRR 333
F N+S SS+TSKW GE EK V+ +F +A PSVIF+DE+DS++ R E++A R+
Sbjct: 1 NFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFIDEVDSMLGRRENPGEHEAMRK 60
Query: 334 LKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKT 393
+K+EF++ +DG+ + + V+V+GATN+P +LD+AV+RR +R+ V LPD + R +LK
Sbjct: 61 MKNEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIRRFPRRLMVNLPDASNREKILKV 120
Query: 394 QLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIREL--------------GP 439
L + D++ LA T+GYSGSDL+ LC AA PIRE+ G
Sbjct: 121 ILAKEELA-PGIDMDSLATMTDGYSGSDLKNLCVTAAHYPIREILEKEKKEKNVAKAEGR 179
Query: 440 QNILTIKANQLRPLKYEDFKKAMTVIRPSLQ--KSKWDELEKWNEEFG 485
+ +RPL +DFK A + S+ + +EL +WN+ +G
Sbjct: 180 PEPALYGSEDIRPLTLDDFKSAHEQVCASVSSDSANMNELLQWNDLYG 227
>Os04g0617600 Similar to Cdc48 cell division control protein 48, AAA family
Length = 940
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 22/289 (7%)
Query: 208 RSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKA 267
+ P VKWEDV GL++ K+ +++ + LP + LF+ G+LL+GPPG GKT+LAKA
Sbjct: 650 KVPNVKWEDVGGLEEVKKVILDTIQLPLLYKHLFSSKLGKRSGVLLYGPPGTGKTLLAKA 709
Query: 268 VASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANE 327
VA+E F +V L + +VGE+EK VR +F A +P VIF DE+DS+ AR ++
Sbjct: 710 VATECSLNFLSVKGPELINMYVGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGSSS 769
Query: 328 NDAS--RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPL-P 382
+ A R+ S+ L++ DG++ N DL I IGATN+P LD A+LR R K +YV +
Sbjct: 770 DSAGVMDRVVSQLLVEIDGLSDNSQDLFI-IGATNRPDLLDSALLRPGRFDKLLYVGVNS 828
Query: 383 DPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNI 442
D + R +LK Q + + L ++G+D+ ALC +A + L
Sbjct: 829 DASYRERILKAQTRKYKLHENVSLLSIAQQCPPNFTGADIYALCADAWYHAAKNLAK--- 885
Query: 443 LTIKANQLRP---------LKYEDFKKAMTVIRPSLQKSKWDELEKWNE 482
T++A+ R ++ DF + I PSL +EL+ + +
Sbjct: 886 -TLEADPSRTSEASADDVIVEINDFMTVLGDITPSLS---IEELQNYEQ 930
>Os02g0199900 Similar to 26S proteasome regulatory complex subunit p42D
Length = 400
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 137/233 (58%), Gaps = 15/233 (6%)
Query: 212 VKWEDVAGLDKAKQALMEMVILPTKRRDLF--TGLRRPARGLLLFGPPGNGKTMLAKAVA 269
V + V GL + L E + LP +LF G++ P +G+LL+GPPG GKT+LA+A+A
Sbjct: 137 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK-PPKGVLLYGPPGTGKTLLARAIA 195
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEND 329
S +A F + +S++ K++GE+ +L+R +F A D QP +IFMDEID++ R +
Sbjct: 196 SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 255
Query: 330 ASRRLKS---EFLIQFDGVTSNPDDL--VIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
A R ++ E L Q DG D+L V +I ATN+P LD A+LR RL ++I +PLP
Sbjct: 256 ADREIQRTLMELLNQLDGF----DELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 311
Query: 383 DPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIR 435
+ R +LK G + K D E + EG++G+DLR +C EA M IR
Sbjct: 312 NEQARMEVLKIHAAGIA-KHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIR 363
>Os02g0325100 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7)
Length = 419
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAV 268
P V + D+ G D KQ + E V LP +L+ + P RG+LL+GPPG GKTMLAKAV
Sbjct: 161 PNVTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 220
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEN 328
A + A F V S K++GE ++VR +F +A + P++IF+DE+D++ +AR +
Sbjct: 221 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 280
Query: 329 DASR---RLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPD 383
A R R+ E L Q DG + V VI ATN+ LD A+LR RL ++I PLPD
Sbjct: 281 GADREVQRILMELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 338
Query: 384 PNVRRLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
+RL+ Q+ LS DLE + + S +D+ A+C+EA M +R+
Sbjct: 339 RRQKRLVF--QVCTAKMNLSDEVDLEDYVSRPDKISAADIAAICQEAGMHAVRK 390
>Os06g0607800 Similar to 26S proteasome regulatory complex subunit p42D
Length = 401
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 136/233 (58%), Gaps = 15/233 (6%)
Query: 212 VKWEDVAGLDKAKQALMEMVILPTKRRDLF--TGLRRPARGLLLFGPPGNGKTMLAKAVA 269
V + V GL + L E + LP LF G++ P +G+LL+GPPG GKT+LA+A+A
Sbjct: 138 VSYSAVGGLSDQIRELRESIELPLMNPKLFLRVGIK-PPKGVLLYGPPGTGKTLLARAIA 196
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEND 329
S +A F + +S++ K++GE+ +L+R +F A + QP +IFMDEID++ R +
Sbjct: 197 SNIDANFLKIVSSAIIDKYIGESARLIREMFSYAREHQPCIIFMDEIDAIGGRRFSEGTS 256
Query: 330 ASRRLKS---EFLIQFDGVTSNPDDL--VIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
A R ++ E L Q DG D+L V +I ATN+P LD A+LR RL ++I +PLP
Sbjct: 257 ADREIQRTLMELLNQLDGF----DELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 312
Query: 383 DPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIR 435
+ R +LK G + K D E + EG++G+DLR +C EA M IR
Sbjct: 313 NEQSRMEVLKIHAAGIA-KHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIR 364
>Os09g0515100 Similar to Cdc48 cell division control protein 48, AAA family
Length = 1198
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 138/274 (50%), Gaps = 16/274 (5%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVA 269
+V + D+ GL AL EMV P D F P RG+LL GPPG GKT++A+A+A
Sbjct: 360 SVSFNDIGGLSDYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALA 419
Query: 270 SES-----EATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARL 324
+ + +F+ + + SKWVGEAE+ ++ LF A QPS+IF DEID + R
Sbjct: 420 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRS 479
Query: 325 ANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
+ + + S L DG+ S V++IGATN+ +D A+ R R + + PLP
Sbjct: 480 SKQEQIHNSIVSTLLALMDGLDSR--GQVVLIGATNRIDAIDGALRRPGRFDREFFFPLP 537
Query: 383 DPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQ-- 440
R +L + LAA GY G+DL+ALC EAA+ RE PQ
Sbjct: 538 GYEARAEILDIHTRKWKDPPPKELKTELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 597
Query: 441 ---NILTIKANQLRPLKYEDFKKAMTVIRPSLQK 471
+ I + +R KY F +AM+ I P+ +
Sbjct: 598 TSDDKFVIDVDSVRVEKYH-FLEAMSTITPAAHR 630
>Os04g0284600 Similar to TAT-binding protein 1 (Fragment)
Length = 357
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 146/264 (55%), Gaps = 18/264 (6%)
Query: 206 VDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTML 264
VD + + + GL+K + L+E V+LP ++ F L P +G+LL+GPPG GKT++
Sbjct: 105 VDSTSNEHYCGIGGLEKQIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLV 164
Query: 265 AKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARL 324
A A AS++ ATF ++ L K +GE +LVR F +A ++ P +IF+DEID++ S
Sbjct: 165 AHAFASQTNATFLKLTGPQLAVKLIGEGARLVRDAFQLAKEKAPCIIFIDEIDAIGSKHF 224
Query: 325 ANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
+ + ++ E L Q DGV S + + VI ATN+P+ LD A LR RL ++I P P
Sbjct: 225 DSGDREVQQTIVELLNQLDGVGSY--ESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHP 282
Query: 383 DPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQNI 442
R +L+ + K + E LA T+ ++G+ L+A+C EA+M+
Sbjct: 283 SEQARVRILEIHSRKMD-KNPDVNFEELACCTDDFNGAQLKAVCFEASMLAFHR------ 335
Query: 443 LTIKANQLRPLKYEDFKKAMTVIR 466
A ++R +EDF +A+ ++
Sbjct: 336 ---DATEVR---HEDFVRAIAQVK 353
>AK110388
Length = 957
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 31/302 (10%)
Query: 212 VKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASE 271
VKW+DV GL++AK+ ++E + LP K +LF+G + G+L++GPPG GKT+LAKA+A+E
Sbjct: 654 VKWDDVGGLEEAKKEILETIELPLKHPELFSGGAKQRAGVLMYGPPGCGKTLLAKAIATE 713
Query: 272 SEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDAS 331
F +V L + +VGE+EK +R LF A D P + F DE+D++ R A +
Sbjct: 714 MGLNFISVKGPELINMYVGESEKNIRLLFQRARDNSPCICFFDELDALAPKRGAKGDSGG 773
Query: 332 --RRLKSEFLIQFDGVTSNPDD-----LVIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
R+ ++ L + DGV D V +IGATN+P LD ++LR R + Y+ P
Sbjct: 774 VMDRIVAQLLAEVDGVGGTKSDGSASAQVFIIGATNRPDLLDPSLLRPGRFDRLCYLGPP 833
Query: 383 DPNVRRLLLKTQLKGQSFKLSSH-DLERLAADTEG-YSGSDLRALCEEAAMMPIRE---- 436
N + + + + FKL+ DL + E YSG+D ALC +A M+ + E
Sbjct: 834 Q-NKKEQVAAVKALTRKFKLAPDVDLAAVVEPLEPVYSGADYFALCSDAMMLAVNEAVER 892
Query: 437 LGPQNI------------LTIKANQLRPLKYE--DFKKAMTVIRPSLQKSKWDELEKWNE 482
L Q T+ A Q PL E F+ A ++PS+ + E
Sbjct: 893 LKAQAFAKDGTVKEAPAAATVPAKQ-EPLLIEMRHFEAARAALKPSVSPADLKRYEGMKH 951
Query: 483 EF 484
+F
Sbjct: 952 QF 953
>Os04g0498800 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 578
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 146/280 (52%), Gaps = 28/280 (10%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAV 268
PAV W+D+ GL K+ L + V P K F L P RG+LL GPPG KT LAKA
Sbjct: 299 PAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCSKTTLAKAA 358
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEN 328
A ++A+FF++S + L SK+VGE E L+R F +A PS+IF DE D++ R
Sbjct: 359 AHAAQASFFSLSGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSG 418
Query: 329 DAS------RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVP 380
++S RL S L + DG+ +IV+ ATN+P +D A+LR R +YVP
Sbjct: 419 NSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPGRFDMVLYVP 476
Query: 381 LPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELGPQ 440
PD R +L+ + DL ++A TE ++G+DL LC EA M +RE
Sbjct: 477 PPDAEGRYEILRIHTRKMPLG-DDVDLWKVAERTELFTGADLEGLCREAGMAALRE---- 531
Query: 441 NILTIKANQLRPLKYE----DFKKAMTVIRPSLQKSKWDE 476
LR ++ F+ A+ +RPSL +S DE
Sbjct: 532 --------SLRSERFVCDDIHFQAALRSLRPSLTQSVVDE 563
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 31/283 (10%)
Query: 215 EDVAGLDKAKQALMEMVILPT--KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASES 272
E +AG +AL E+V+ P R GL P RGLLL GP G GK + +AV E
Sbjct: 35 EVIAGNRAVLEALRELVMYPVLYAREARVLGLNFP-RGLLLHGPSGTGKKSMVRAVVREC 93
Query: 273 EATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDR----QPSVIFMDEIDSVMSARLANEN 328
A + + S+ GE EK +R F A + +P+VIF+DE+D + R +
Sbjct: 94 NAHLTVIDSISVHKPHAGEGEKFMREAFTEAYSQASQGRPAVIFIDELDDICPPRGSRRE 153
Query: 329 DASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNV 386
S R+ + L DG +S ++V+ + + ++ A+ R R I V +P
Sbjct: 154 QGS-RIVGQLLTLMDGKSSKLLPHLVVVASATRVDAIESALRRPGRFDSEIEVTVPTAEE 212
Query: 387 RRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELG----PQNI 442
R +LK K DL+ +AA GY G+DL+ALC EAA L +N+
Sbjct: 213 RFEILKLYTKNLHLG-ECVDLQSVAASCNGYVGADLQALCREAARRAYGRLSSSSESENV 271
Query: 443 LTIKANQLRPLKYEDFKKAMTVIRPSLQKS--------KWDEL 477
LT L ED++ A +V + S+ + WD++
Sbjct: 272 LT--------LIMEDWESAKSVAKNSVTRGVTKEIPAVSWDDI 306
>Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.24.-)
Length = 709
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 213 KWEDVAGLDKAKQALMEMV-ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASE 271
K+ DV G+D+AK L E+V L +R G + P +G+LL GPPG GKTMLA+AVA E
Sbjct: 221 KFSDVKGVDEAKAELEEIVHYLRDPKRFTHLGGKLP-KGVLLVGPPGTGKTMLARAVAGE 279
Query: 272 SEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDAS 331
+ FF+ S S +VG + VR LF A R P +IFMDEID++ +R +
Sbjct: 280 AGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRNPKDQQYM 339
Query: 332 RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRL 389
R ++ L++ DG N +IVI ATN PQ LD A++R R + I VP PD RR
Sbjct: 340 RMTLNQLLVELDGFKQNEG--IIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQ 397
Query: 390 LLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAM 431
+L++ + + K DL +A T G+SG+DL L AA+
Sbjct: 398 ILESHML-KVLKSDDVDLMIIARGTPGFSGADLANLVNVAAL 438
>AK110513
Length = 885
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 137/246 (55%), Gaps = 17/246 (6%)
Query: 202 NTTIVDRSPA--VKWEDVAGLDKAKQALMEMVIL---PTKRRDLFTGLRRPARGLLLFGP 256
N T VD++ V + DVAG D+AKQ +ME V P K ++L G + P +G LL GP
Sbjct: 357 NVTSVDKNAKDKVTFNDVAGCDEAKQEIMEFVDFLKKPEKYKEL--GAKIP-KGALLVGP 413
Query: 257 PGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEI 316
PG GKT+LAKA A E+ F ++S S +VG VR LF A + PS+IF+DEI
Sbjct: 414 PGTGKTLLAKATAGEAGVPFLSISGSDFMEMFVGVGPARVRDLFSQARSQAPSIIFIDEI 473
Query: 317 DSVMSAR----LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR- 371
D++ AR +A +D ++ L++ DG N V+V+ TN+P LD A++R
Sbjct: 474 DAIGRARGRGAMAGGHDERENTLNQLLVEMDGF--NTTSGVVVLAGTNRPDILDKALMRP 531
Query: 372 -RLVKRIYVPLPDPNVRRLLLKTQL-KGQSFKLSSHDLERLAADTEGYSGSDLRALCEEA 429
R + I V PD R + + L K + K H ERLAA T G+SG+D+ +C EA
Sbjct: 532 GRFDRTISVDTPDIKGREQIFRVHLAKLRLEKALEHYSERLAALTPGFSGADIANVCNEA 591
Query: 430 AMMPIR 435
A++ R
Sbjct: 592 ALVAAR 597
>Os01g0574500 Peptidase M41, FtsH domain containing protein
Length = 715
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 127/222 (57%), Gaps = 7/222 (3%)
Query: 213 KWEDVAGLDKAKQALMEMV-ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASE 271
K+ DV G+D+AK L E+V L +R G + P +G+LL GPPG GKTMLA+A+A E
Sbjct: 228 KFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLP-KGVLLVGPPGTGKTMLARAIAGE 286
Query: 272 SEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDAS 331
+ FF+ S S +VG + VR LF A R P +IFMDEID++ +R +
Sbjct: 287 AGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRNPKDQQYM 346
Query: 332 RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRL 389
+ ++ L++ DG N + +IVI ATN P+ LD A++R R + I VP PD RR
Sbjct: 347 KMTLNQLLVELDGFKQN--EGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 404
Query: 390 LLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAM 431
+L++ + + K DL +A T G+SG+DL L AA+
Sbjct: 405 ILESHMS-KVLKSDDVDLMIIARGTPGFSGADLANLVNVAAL 445
>Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependent protease)
Length = 609
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 211 AVKWEDVAGLDKAKQALMEMV-ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVA 269
V ++DVAG+D+AKQ ME+V L R G R P +G+LL GPPG GKT+LAKA+A
Sbjct: 143 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 201
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSAR---LAN 326
E+ FF++S S +VG VR LF A + P ++F+DEID+V R +
Sbjct: 202 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGG 261
Query: 327 ENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDP 384
ND + ++ L + DG N +IVI ATN+ LD A+LR R +++ V +PD
Sbjct: 262 GNDEREQTLNQLLTEMDGFEGNTG--IIVIAATNRADILDSALLRPGRFDRQVSVDVPDV 319
Query: 385 NVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIR 435
R +LK + F + LE +A T G+SG+DL L EAA++ R
Sbjct: 320 RGRTEILKVHGSNKKFD-TDVSLEVIAMRTPGFSGADLANLLNEAAILAGR 369
>Os06g0109400 AAA ATPase domain containing protein
Length = 770
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 152/285 (53%), Gaps = 11/285 (3%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFT--GLRRPARGLLLFGPPGNGKTMLAKA 267
P V W+DV GLD ++ +I K+ + + GL A G LLFGPPG GKT++AKA
Sbjct: 490 PDVTWDDVGGLDSLRKEFDRYIIRCIKQPEEYKTFGLNMQA-GFLLFGPPGCGKTLIAKA 548
Query: 268 VASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANE 327
VA E+ A F ++ L +K+VGE+E VR +F+ A P ++F DE+D++ + R
Sbjct: 549 VAHEAGANFIHIKGPELLNKYVGESESEVRKIFIRAQTNTPCILFFDEVDALTTKRGKEG 608
Query: 328 NDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPN 385
RL ++ LI+ DG V VIGATN+ +DDA LR R K+ YVPLP +
Sbjct: 609 GWVVERLLNQLLIELDGAGERKG--VFVIGATNRIDVIDDAALRPGRFGKKHYVPLPGAD 666
Query: 386 VRRLLLKTQLKGQSFKLSSHDLERLA--ADTEGYSGSDLRALCEEAAMMPIRE-LGPQNI 442
R +L+ + + SS DL LA + + +G+DL ++ EAAM + E L
Sbjct: 667 ERVSILRALARNKPIS-SSVDLGALARREECKNLTGADLASMVNEAAMAALEERLEFLEN 725
Query: 443 LTIKANQLRPLKYEDFKKAMTVIRPSLQKSKWDELEKWNEEFGSS 487
+ ++ F++A+ ++PS+ + + E +++ +S
Sbjct: 726 GESSMSSSSAIELPHFERALAKMQPSVSEQQRRHYEALCKKYSAS 770
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 157/307 (51%), Gaps = 50/307 (16%)
Query: 214 WEDVAGLDKAKQALMEMVILPTKRRDL--FTGLRRPARGLLLFGPPGNGKTMLAKAVASE 271
+ D+ G++ + LM V++P ++ + G++ P GLLL GPPG GKT LA A+A+E
Sbjct: 190 FSDLGGMESVIEQLMMEVVVPLCHPEVPRWLGVK-PVAGLLLHGPPGCGKTTLAHAIANE 248
Query: 272 SEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDAS 331
+ F+ +SA + S G +E+ +R+LF A PS++F+DEID++ S R + +
Sbjct: 249 TGVPFYKISAPEVVSGVSGASEENIRSLFKKAYRTAPSIVFIDEIDAIASKRENLQREME 308
Query: 332 RRLKSEFLIQFD----GVTSNPDDL-----------VIVIGATNKPQELDDAVLR--RLV 374
RR+ ++ + D + S D+ VIVIGATN+P +D A+ R R
Sbjct: 309 RRIVTQLMTCMDEYHQQIGSGSGDVGSESAEKKPGYVIVIGATNRPDAVDQALRRPGRFD 368
Query: 375 KRIYVPLPDPNVRRLLL-----KTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEA 429
+ I + +PD R+ +L +L+GQ DL ++A T + G+DL+AL ++A
Sbjct: 369 REISLGVPDEYARKKILMMLTRNLRLEGQL------DLLKIARATSSFVGADLKALVDKA 422
Query: 430 AMMPIRELGPQNILTI-----------------KANQLRPLK--YEDFKKAMTVIRPSLQ 470
+ ++ + + AN++ L +DF++A +++PSL+
Sbjct: 423 GNLAMKRIIDRRRAQFCQEHDENSKHDWWRQPWDANEIEGLSITMDDFEEATKMVQPSLR 482
Query: 471 KSKWDEL 477
+ + +
Sbjct: 483 REGFSSI 489
>Os05g0458400 Similar to AAA-metalloprotease FtsH
Length = 822
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 130/236 (55%), Gaps = 19/236 (8%)
Query: 212 VKWEDVAGLDKAKQALMEMVIL---PTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAV 268
V ++DVAG D+AKQ +ME V P K +L G + P +G LL GPPG GKT+LAKA
Sbjct: 332 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLAKAT 388
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSAR----L 324
A ES F ++S S +VG VR LF A PS+IF+DEID++ AR
Sbjct: 389 AGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGF 448
Query: 325 ANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
+ ND ++ L++ DG + V+V+ TN+P LD A+LR R ++I + P
Sbjct: 449 SGSNDERESTLNQLLVEMDGFGTTSG--VVVLAGTNRPDILDKALLRPGRFDRQITIDKP 506
Query: 383 DPNVRRLLLKTQLKGQSFKLS---SHDLERLAADTEGYSGSDLRALCEEAAMMPIR 435
D R + + LK KL S +RLAA T G++G+D+ +C EAA++ R
Sbjct: 507 DIKGRDQIFRIYLK--KLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAAR 560
>Os02g0649700 Peptidase M41, FtsH extracellular domain containing protein
Length = 822
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 141/271 (52%), Gaps = 31/271 (11%)
Query: 170 GQASSHQKSSSGGAKPVQRAGANYDDKLVEMINTTIVDRSPAVKWEDVAGLDKAKQALME 229
GQ + + S+SGGAK + + + V + DVAG+D+AK+ L E
Sbjct: 321 GQLRNRKNSNSGGAK--------------------VSESTDIVTFADVAGVDEAKEELEE 360
Query: 230 MV-ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKW 288
+V L R + G R P RG+LL G PG GKT+LAKAVA E+E F + SAS +
Sbjct: 361 IVEFLRNPERYIRLGAR-PPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELY 419
Query: 289 VGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLAN----ENDASRRLKSEFLIQFDG 344
VG VR LF A PS+IF+DEID+V +R ND + ++ L + DG
Sbjct: 420 VGMGAARVRDLFARAKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDG 479
Query: 345 VTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKL 402
+N VIV+GATN+ LD A+ R R + + V PD R +LK + + L
Sbjct: 480 FDTN--SAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPL 537
Query: 403 SSH-DLERLAADTEGYSGSDLRALCEEAAMM 432
DL +AA T G++G+DL L EAA++
Sbjct: 538 GKDVDLSDIAAMTTGFTGADLANLVNEAALL 568
>Os01g0842600 Similar to AAA-metalloprotease FtsH
Length = 802
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 130/237 (54%), Gaps = 15/237 (6%)
Query: 212 VKWEDVAGLDKAKQALMEMVIL---PTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAV 268
V ++DVAG D+AKQ +ME V P K +L G + P +G LL GPPG GKT+LAKA
Sbjct: 317 VFFKDVAGCDEAKQEIMEFVHFLKNPKKYEEL--GAKIP-KGALLVGPPGTGKTLLAKAT 373
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSAR----L 324
A ES F ++S S +VG VR LF A PS++F+DEID++ AR
Sbjct: 374 AGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGF 433
Query: 325 ANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
+ +D ++ L++ DG + V+V+ TN+P LD A+LR R ++I + P
Sbjct: 434 SGGHDERESTLNQLLVEMDGFGTTSG--VVVLAGTNRPDILDKALLRPGRFDRQISIDKP 491
Query: 383 DPNVRRLLLKTQLKGQSF-KLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRELG 438
D R + + LK K S +RLAA T G++G+D+ +C EAA++ R G
Sbjct: 492 DIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEG 548
>Os06g0725900 Similar to Cell division protein ftsH homolog, chloroplast
precursor (EC 3.4.24.-) (DS9)
Length = 686
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 211 AVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVA 269
V + DVAG D+AK L E+V K D +T L + +G LL GPPG GKT+LA+AVA
Sbjct: 228 GVTFVDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 286
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSV---MSARLAN 326
E+ FF+ +AS +VG VR LF A + P ++F+DEID+V A L
Sbjct: 287 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGG 346
Query: 327 ENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDP 384
ND + ++ L + DG N VIV+ ATN+P LD A+LR R +++ V PD
Sbjct: 347 GNDEREQTINQLLTEMDGFAGNSG--VIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDV 404
Query: 385 NVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIR 435
R +L+ +G++ D E++A T G++G+DL+ L EAA++ R
Sbjct: 405 AGRVKILEVHSRGKALA-KDVDFEKIARRTPGFTGADLQNLMNEAAILAAR 454
>AK110158
Length = 856
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 133/236 (56%), Gaps = 17/236 (7%)
Query: 212 VKWEDVAGLDKAKQALMEMVIL---PTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAV 268
K+++VAG+D+AK+ +ME V P K L G + P RG +L GPPG GKT+LAKA
Sbjct: 365 TKFKNVAGMDEAKEEIMEFVNFLKNPEKYEKL--GAKIP-RGAILSGPPGTGKTLLAKAT 421
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLA--- 325
A E++A F +VS S +VG VR +F A P +IF+DEID++ +R
Sbjct: 422 AGEAKAPFLSVSGSEFVEMFVGVGPSRVRDMFANAKKHAPCIIFIDEIDAIGKSRGKGGN 481
Query: 326 -NENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLP 382
ND +E L+Q DG + ++ V+V+ TN+P LD A++R R + I + P
Sbjct: 482 FGGNDERESTLNELLVQMDGFGT--EEHVVVLAGTNRPDVLDAALMRPGRFDRHIAIDRP 539
Query: 383 DPNVRRLLLKTQLKGQSFKLSS-HDL--ERLAADTEGYSGSDLRALCEEAAMMPIR 435
D + R+ + LK + S+ DL E+L+ T G+SG+D+ +C EAA++ R
Sbjct: 540 DISGRKDIFLVHLKPLTLHSSTDRDLLAEKLSTLTPGFSGADVANVCNEAALIAAR 595
>Os06g0192600 26S proteasome regulatory particle triple-A ATPase subunit1 (26S
protease regulatory subunit 7)
Length = 426
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 132/242 (54%), Gaps = 11/242 (4%)
Query: 201 INTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGN 259
+ V+ P V + DV G + + + E+V LP + F L P +G+L +GPPG
Sbjct: 154 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
Query: 260 GKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSV 319
GKT+LA+AVA+ ++A F V S L K+VGE ++VR LF +A ++ ++F DE+D++
Sbjct: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
Query: 320 MSAR----LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RL 373
AR + +N+ R + E + Q DG + + + V+ ATN+P LD A+LR RL
Sbjct: 274 GGARFDDGVGGDNEVQRTM-LEIVNQLDGFDARGN--IKVLMATNRPDTLDPALLRPGRL 330
Query: 374 VKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMP 433
+++ LPD R + K + + + E LA +G+D+R++C EA M
Sbjct: 331 DRKVEFGLPDLEGRTQIFKIHTRTMNCERDIR-FELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 434 IR 435
IR
Sbjct: 390 IR 391
>Os09g0560200 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7).
Splice isoform 2
Length = 448
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 16/237 (6%)
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAV 268
P V ++D+ G + K+ + E V LP +LF P RG+LL GP G GKTMLAKAV
Sbjct: 185 PGVAYDDIGGCEAQKREVREAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTMLAKAV 244
Query: 269 ASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANEN 328
A E+ A FF V+A+ L + ++VR LF +A D P+++F+DE+D++ +AR ++
Sbjct: 245 ARETSAAFFRVNAAELARH---DGPRVVRDLFRLARDMAPAIVFIDEVDAIAAARQGGDD 301
Query: 329 DAS------RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVP 380
D +R+ E L Q DG + + V VI ATN+ +LD A+LR RL +++
Sbjct: 302 DDGGARRHVQRVLIELLTQMDGFDESTN--VRVIMATNRADDLDPALLRPGRLDRKVEFT 359
Query: 381 LPD-PNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
P+ P +RL+L+T G S DL+ LAA + S +++ A+C +A M +R+
Sbjct: 360 APESPEEKRLVLQTCTAGMSLD-GDVDLDALAARRDKLSAAEIAAVCRKAGMQAVRD 415
>AK119842
Length = 769
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 125/224 (55%), Gaps = 9/224 (4%)
Query: 212 VKWEDVAGLDKAKQALMEMV-ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVAS 270
++ DV G D+AK+ +++V L R G R P +G+LL GPPG GKT+LA+AVA
Sbjct: 288 TRFTDVHGCDEAKEEPLDVVDFLKHPERYNKLGGRLP-KGVLLIGPPGTGKTLLARAVAG 346
Query: 271 ESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLANENDA 330
E+ FF VS S +VG K VR LF A + P+++F+DE+D+V R++ + +
Sbjct: 347 EAGVPFFYVSGSEFDEVYVGVGAKRVRELFTAARAKSPAIVFIDELDAVGGKRVSRDANY 406
Query: 331 SRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRR 388
R+ ++ L DG + VI I ATN P+ LD A+ R R + + V LPD + R
Sbjct: 407 HRQTLNQLLNDLDGFDQSTG--VIFIAATNHPELLDSALTRPGRFDRHVQVELPDVSGRL 464
Query: 389 LLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAM 431
+LK K +L+ DL +A T G+SG++L L AA+
Sbjct: 465 AILKYHTK--KIRLNPEIDLSTIARGTPGFSGAELENLANSAAI 506
>Os05g0376200 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 391
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 137/259 (52%), Gaps = 14/259 (5%)
Query: 201 INTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLR-RPARGLLLFGPPGN 259
+ ++ PAV W+D+ GL K+ L + V P K F L P RG+LL GPPG
Sbjct: 124 VTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGC 183
Query: 260 GKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSV 319
KT LAKA A ++A+FF++S + L SK+VGE E L+R F +A PS+IF DE D++
Sbjct: 184 SKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAI 243
Query: 320 MSARLANENDAS------RRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR-- 371
R ++S RL S L + DG+ +IV+ ATN+P +D A+LR
Sbjct: 244 APKRTGPSGNSSGNATVGERLLSTLLTEMDGLELATG--IIVLAATNRPNAIDAALLRPG 301
Query: 372 RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRAL--CEEA 429
R +YVP PD R +L+ + DL ++A TE ++G+DL L EA
Sbjct: 302 RFDMVLYVPPPDAEGRYEILRIHTRKMPLG-DDVDLWKVAERTELFTGADLEGLEGKSEA 360
Query: 430 AMMPIRELGPQNILTIKAN 448
A+ +R Q+++ +N
Sbjct: 361 ALRSLRPSLTQSVVDEYSN 379
>Os02g0784700 Similar to 26S protease regulatory subunit 7 (26S proteasome
subunit 7) (26S proteasome AAA-ATPase subunit RPT1)
(Regulatory particle triple-A ATPase subunit 1)
Length = 235
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 247 PARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDR 306
P +G+L +GPPG GKT+LA+AVA+ ++A F V S L K+VGE ++VR LF +A +
Sbjct: 10 PPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 69
Query: 307 QPSVIFMDEIDSVMSAR----LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKP 362
+ ++F DE+D++ AR + +N+ R + E + Q DG + + + V+ ATN+P
Sbjct: 70 KACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGFDARGN--IKVLMATNRP 126
Query: 363 QELDDAVLR--RLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGS 420
LD A+LR RL +++ LPD R + K + + + E LA +G+
Sbjct: 127 DTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIR-FELLARLCPNSTGA 185
Query: 421 DLRALCEEAAMMPIR 435
D+R++C EA M IR
Sbjct: 186 DIRSVCTEAGMYAIR 200
>Os02g0740300 AAA ATPase domain containing protein
Length = 611
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 170 GQASSHQKSSSGGAKPVQRAGANYDDKLVEMINTTI--------------------VDRS 209
GQ Q S G R G K V + TI +D S
Sbjct: 272 GQKDVKQSSGKGNKSYTTRKGNGQRSKHVPSMEKTISDLEGMGVRVYGFDETSSIPMDGS 331
Query: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPAR---------GLLLFGPPGNG 260
V WE++AG + K+ + + ++L + +++ + R R +L GPPG G
Sbjct: 332 GTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTG 391
Query: 261 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDR-QPSVIFMDEIDSV 319
KT A+ +A ++ V + SK+ GE+E+L+ ++F +A D +IF+DE+DS
Sbjct: 392 KTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSF 451
Query: 320 MSARLANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYV 379
SAR + ++A+RR+ S L Q DG D V+VI ATN+ ++LD A++ R I
Sbjct: 452 ASARDSEMHEATRRILSVILRQIDGFEQ--DRRVVVIAATNRKEDLDPALISRFDSIICF 509
Query: 380 PLPDPNVRRLLLKTQLKGQSFK-LSSHDLERLAADTEGYSGSDLRALCEEA 429
LPD R ++ Q K L+ +L + + TE SG D+R +C++A
Sbjct: 510 DLPDQQTR-----AEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQA 555
>Os06g0229066 Twin-arginine translocation pathway signal domain containing
protein
Length = 486
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 11/232 (4%)
Query: 211 AVKWEDVAGLDKAKQALMEMV-ILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVA 269
V ++DVAG+D+AKQ E+V L + G R P +G+LL GPPG GKT+LAKA+A
Sbjct: 212 GVTFDDVAGVDEAKQDFQEIVQFLKFPEKFTAVGARTP-KGVLLVGPPGTGKTLLAKAIA 270
Query: 270 SESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSVIFMDEIDSV---MSARLAN 326
E+ FF++S S +VG VR LF A P ++F+DEID+V A +
Sbjct: 271 GEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKASAPCLVFIDEIDAVGRQRGAGIGG 330
Query: 327 ENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDP 384
ND + ++ L + D D V+VI ATN+P+ LD A+LR R +R+ V LPD
Sbjct: 331 GNDEREQTLNQLLTEMD-GFGGGDGGVVVIAATNRPEILDAALLRPGRFDRRVSVGLPDV 389
Query: 385 NVRRLLLKTQLKGQSFKLSSH-DLERLAADTEGYSGSDLRALCEEAAMMPIR 435
R +L + G + +L L +A T G+SG+DL L EAA++ R
Sbjct: 390 RGREEIL--LVHGANKRLDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGR 439
>Os05g0519400 Similar to N-ethylmaleimide sensitive factor NSF (Fragment)
Length = 743
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 134/254 (52%), Gaps = 24/254 (9%)
Query: 246 RPARGLLLFGPPGNGKTMLAKAVA---SESEATFFNVSASSLTSKWVGEAEKLVRTLFMV 302
+ +G+LL+GPPG GKT++A+ + + +E N + SK+VGE EK VR LF
Sbjct: 251 KHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVN--GPEVLSKFVGETEKNVRDLFAD 308
Query: 303 AVDRQPS--------VIFMDEIDSVMSARLANENDASRR--LKSEFLIQFDGVTSNPDDL 352
A + Q + VI DEID++ +R + + + ++ L + DGV + +
Sbjct: 309 AENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNN-- 366
Query: 353 VIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLK---TQLKGQSFKLSSHDL 407
V++IG TN+ LD+A+LR RL I + LPD N R +L+ ++K SF + +L
Sbjct: 367 VLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNL 426
Query: 408 ERLAADTEGYSGSDLRALCEEAAMMPI-RELGPQNILTIKANQLRPLKYEDFKKAMTVIR 466
+ LAA T+ YSG++L + + A + R++ ++ + + +DF A+ I
Sbjct: 427 QELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVNALHEIT 486
Query: 467 PSLQKSKWDELEKW 480
P+ S D+LE+
Sbjct: 487 PAFGAS-TDDLERC 499
>Os12g0443800 AAA ATPase, central region domain containing protein
Length = 144
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 289 VGEAEKLVRTLFMVAVDRQPSVIFMDEIDSVMSARLAN-ENDASRRLKSEFLIQFDGVTS 347
+GE EKLVR LF VA RQP+VIF+DEIDS++S R ++ E+++SRRLK++FLI+ +G S
Sbjct: 10 IGEGEKLVRALFGVACCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDS 69
Query: 348 NPDDLVIV 355
D ++++
Sbjct: 70 GNDQILLI 77
>Os02g0749150 AAA ATPase, central region domain containing protein
Length = 131
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 373 LVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMM 432
++ RIYV LPD R +LK L ++ + S + LA TEGYSGSDL+ LC +A
Sbjct: 1 MIYRIYVDLPDAQNRMKILKILLAKENLE-SDFRFDELANSTEGYSGSDLKNLCIASAYR 59
Query: 433 PIREL-------GPQNILTIKANQLRPLKYEDFKKAMTVIRPSLQ--KSKWDELEKWNEE 483
P+ EL GP + LRPL+ +DF +A + PS+ + +EL KWNE+
Sbjct: 60 PVHELLEEEKKGGP----CSQNTGLRPLRLDDFIQAKAKVSPSVSYDATSMNELRKWNEQ 115
Query: 484 FG 485
+G
Sbjct: 116 YG 117
>Os04g0479000 Similar to HPV16 E1 protein binding protein (Thyroid hormone
receptor interactor 13) (TRIP13 protein)
Length = 312
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 249 RGLLLFGPPGNGKTMLAKAVASE---------SEATFFNVSASSLTSKWVGEAEKLVRTL 299
R +LL GPPG GKT L KA+A + S V+A SL SKW E+ KLV L
Sbjct: 128 RIVLLHGPPGTGKTSLCKALAQKLSIRFKSRYSMCQLIEVNAHSLFSKWFSESGKLVAKL 187
Query: 300 F-----MVAVDRQPSVIFMDEIDSVMSARLA----NENDASRRLKSEFLIQFDGVTSNPD 350
F MV + + +DE++S+ +AR A +E S R+ + L Q D + S P+
Sbjct: 188 FQKIQEMVEEESNLVFVLIDEVESLAAARQAAISGSEPSDSIRVVNALLTQMDKLKSWPN 247
Query: 351 DLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDPNVRRLLLKTQLK 396
VI++ +N +D A + R + YV P R +L++ L+
Sbjct: 248 --VIILTTSNITTAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ 291
>Os10g0442600 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 203
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 336 SEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLKT 393
++ L + DG+ N V +IGATN+P +D A+LR RL + IY+PLPD R + K
Sbjct: 3 NQLLTEMDGM--NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKA 60
Query: 394 QLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAAMMPIRE 436
L+ +S DL LA T+G+SG+D+ +C+ A IRE
Sbjct: 61 CLR-KSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRE 102
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,472,850
Number of extensions: 583668
Number of successful extensions: 2336
Number of sequences better than 1.0e-10: 54
Number of HSP's gapped: 2194
Number of HSP's successfully gapped: 60
Length of query: 487
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 382
Effective length of database: 11,553,331
Effective search space: 4413372442
Effective search space used: 4413372442
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)