FiT-DB / Search/ Help/ Sample detail

Os01g0673500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0156) R2 : 0.631
β1 : -0.769 (0.0572) R2dD : 0.152 R2D : 0.156
β2 : 0.91 (0.0377) R2dC : 0.473 R2C : 0.475
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0311 (0.0333) R2dN8 : 0.000943 R2N8 : 0.00224
σ : 0.294
deviance : 39.33
__
_____
C
peak time of C : 10.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.35 0.246 11.6 -0.557 0.945 0.212 -0.941 1.7 0.11 10.5 31.1 1181 -- --
27.45 0.244 11.7 -0.829 0.943 0.404 -0.936 -- 0.108 10.4 31.32 1184 -- --
30.89 0.259 11.6 -0.571 0.955 0.205 -- 1.89 0.109 10.3 31.1 1166 -- --
31.01 0.259 11.7 -0.865 0.957 0.417 -- -- 0.109 10.3 31.4 1171 -- --
84.74 0.429 11.6 -0.279 -- -0.072 -- 3.19 0.0907 -- 29.78 1383 -- --
35.27 0.278 11.7 -0.727 0.901 -- -1.01 -- 0.0348 10.3 -- -- -- --
39.33 0.294 11.7 -0.769 0.91 -- -- -- 0.0311 10.1 -- -- -- --
82.61 0.423 11.7 -0.872 -- 0.307 -- -- 0.01 -- 33.53 7073 -- --
50.26 0.33 11.7 -- 0.948 0.309 -- -- 0.177 10.3 32.8 1096 -- --
89.5 0.442 11.7 -0.781 -- -- -- -- 0.0297 -- -- -- -- --
54.91 0.347 11.7 -- 0.914 -- -- -- 0.117 10.2 -- -- -- --
92.2 0.447 11.7 -- -- -0.431 -- -- -0.000992 -- 35.49 47520 -- --
105.61 0.48 11.7 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.12 precipitation 0.1 270 < th dose independent rect. 1 8
2 26.12 humidity 50.0 270 > th dose independent rect. 9 16
3 26.12 precipitation 0.1 270 < th dose dependent rect. 1 8
4 26.14 precipitation 0.1 270 < th dose independent rect. 3 16
5 26.14 precipitation 0.1 270 < th dose dependent rect. 3 16
6 26.18 precipitation 0.1 270 < th dose independent rect. 15 16
7 26.18 precipitation 0.1 270 < th dose dependent rect. 15 16
11 26.34 wind 7.0 270 < th dose independent rect. 1 8
12 26.34 wind 9.0 270 < th dose dependent rect. 1 7
13 26.37 temperature 30.0 270 < th dose independent rect. 1 8
18 26.44 temperature 10.0 270 > th dose independent rect. 1 8
20 26.44 humidity 50.0 270 > th dose independent rect. 1 8
21 26.44 atmosphere 995.0 270 > th dose independent rect. 1 8
22 26.44 atmosphere 1015.0 270 < th dose independent rect. 1 8
23 26.44 temperature 10.0 270 > th dose independent rect. 9 16
24 26.48 wind 7.0 270 < th dose independent rect. 15 16
26 26.53 wind 9.0 270 < th dose independent rect. 9 16
29 26.54 temperature 10.0 270 > th dose independent rect. 19 8
30 26.54 temperature 30.0 270 < th dose independent rect. 19 8
31 26.54 humidity 50.0 270 > th dose independent rect. 19 8
32 26.54 atmosphere 995.0 270 > th dose independent rect. 19 8
33 26.54 radiation 40.0 270 < th dose independent rect. 1 8
34 26.54 radiation 1.0 270 < th dose independent rect. 19 8
39 26.54 temperature 10.0 270 > th dose independent rect. 3 16
40 26.54 atmosphere 1015.0 270 < th dose independent rect. 3 16
41 26.54 radiation 1.0 270 < th dose dependent rect. 19 8
55 26.55 radiation 1.0 270 < th dose dependent rect. 17 10
62 26.60 wind 9.0 270 < th dose independent rect. 19 8
72 26.67 precipitation 0.1 270 < th dose independent rect. 19 8
73 26.67 precipitation 0.1 270 < th dose dependent rect. 19 8
74 26.69 radiation 1.0 270 < th dose independent rect. 17 10
76 26.74 wind 9.0 270 < th dose independent rect. 7 8
77 26.74 radiation 40.0 270 < th dose dependent rect. 1 8
78 26.74 radiation 1.0 270 < th dose dependent rect. 5 22
79 26.75 wind 9.0 270 < th dose independent rect. 3 16
84 26.79 temperature 10.0 270 > th dose dependent rect. 15 16
87 26.80 radiation 1.0 270 < th dose dependent rect. 10 17
91 26.82 radiation 1.0 270 < th dose dependent sin 14 NA
94 26.83 temperature 10.0 270 > th dose independent rect. 7 8
96 26.83 atmosphere 1015.0 270 < th dose independent rect. 7 8
98 26.83 temperature 10.0 270 > th dose independent rect. 15 16
103 26.85 radiation 40.0 270 < th dose independent rect. 15 16
107 26.87 atmosphere 995.0 270 > th dose independent rect. 7 8
124 26.91 precipitation 0.1 270 < th dose independent rect. 7 8
129 26.91 precipitation 0.1 270 < th dose dependent rect. 7 8
131 26.92 atmosphere 995.0 270 > th dose independent rect. 9 16
138 26.95 precipitation 0.1 270 < th dose independent rect. 9 16
139 26.95 precipitation 0.1 270 < th dose dependent rect. 9 16
146 26.99 atmosphere 1000.0 90 > th dose independent rect. 21 7
166 27.04 radiation 1.0 270 < th dose independent rect. 10 17
171 27.06 atmosphere 1000.0 10 > th dose independent rect. 23 5
184 27.10 radiation 1.0 270 < th dose independent sin 14 NA
211 27.13 radiation 1.0 30 < th dose dependent sin 11 NA
220 27.14 radiation 1.0 270 < th dose independent rect. 6 21
224 27.15 temperature 10.0 270 > th dose dependent rect. 7 7
246 27.17 humidity 80.0 720 < th dose dependent rect. 18 1
257 27.18 temperature 10.0 90 > th dose dependent rect. 17 15
259 27.19 radiation 40.0 90 < th dose independent rect. 3 8
279 27.23 wind 7.0 270 < th dose dependent rect. 3 3
281 27.23 temperature 10.0 270 > th dose dependent rect. 1 7
290 27.24 humidity 50.0 270 > th dose dependent rect. 1 7
293 27.25 wind 1.0 270 > th dose independent rect. 7 8
312 27.29 temperature 10.0 270 > th dose dependent rect. 2 5
327 27.32 precipitation 0.1 270 < th dose independent rect. 3 3
331 27.32 precipitation 0.1 270 < th dose dependent rect. 3 3
340 27.33 atmosphere 995.0 270 > th dose independent rect. 3 16
350 27.35 humidity 50.0 270 > th dose independent rect. 7 7
353 27.35 precipitation 0.1 270 < th dose independent rect. 24 23
355 27.35 temperature 10.0 10 > th dose dependent rect. 16 16
356 27.35 precipitation 0.1 270 < th dose dependent rect. 24 23
360 27.37 humidity 50.0 270 > th dose dependent rect. 2 5
404 27.43 temperature 15.0 10 > th dose independent rect. 23 5
443 27.50 atmosphere 1000.0 270 > th dose independent rect. 23 1
458 27.53 wind 5.0 270 < th dose independent rect. 3 3
461 27.53 humidity 80.0 720 < th dose dependent rect. 18 3
472 27.55 temperature 10.0 270 > th dose dependent rect. 13 8
482 27.57 temperature 10.0 270 > th dose dependent rect. 3 3
483 27.58 radiation 1.0 30 < th dose independent sin 11 NA
490 27.59 temperature 10.0 90 > th dose independent rect. 21 7
491 27.59 temperature 30.0 90 < th dose independent rect. 21 7
492 27.59 humidity 50.0 90 > th dose independent rect. 21 7
496 27.59 radiation 1.0 90 < th dose independent rect. 21 7
509 27.59 radiation 1.0 90 < th dose dependent rect. 21 7
561 27.62 precipitation 0.1 270 < th dose independent rect. 13 8
565 27.62 precipitation 0.1 270 < th dose dependent rect. 13 8
569 27.63 wind 9.0 90 < th dose independent rect. 21 7
572 27.63 atmosphere 995.0 270 > th dose independent rect. 15 16
575 27.63 wind 9.0 10 < th dose dependent rect. 4 6
583 27.65 temperature 25.0 10 < th dose independent rect. 22 6
594 27.67 radiation 1.0 10 < th dose dependent rect. 23 7
595 27.67 radiation 1.0 10 < th dose dependent rect. 23 9
605 27.68 radiation 1.0 270 > th dose independent rect. 7 8
612 27.69 temperature 10.0 270 > th dose independent rect. 3 3
614 27.69 temperature 30.0 270 < th dose independent rect. 3 3
615 27.69 humidity 50.0 270 > th dose independent rect. 3 3
618 27.69 atmosphere 995.0 270 > th dose independent rect. 3 3
619 27.69 atmosphere 1015.0 270 < th dose independent rect. 3 3
620 27.69 radiation 20.0 270 < th dose independent rect. 3 3
625 27.69 temperature 10.0 270 > th dose independent rect. 6 21
632 27.70 precipitation 0.1 10 < th dose independent rect. 4 19
633 27.70 wind 9.0 270 < th dose independent rect. 6 21
639 27.70 precipitation 0.1 10 < th dose dependent rect. 4 19
640 27.71 temperature 15.0 270 > th dose independent rect. 23 1
641 27.71 wind 9.0 10 < th dose independent rect. 23 5
644 27.71 humidity 50.0 10 > th dose independent rect. 23 5
648 27.71 radiation 1.0 10 < th dose independent rect. 23 5
656 27.71 temperature 10.0 10 > th dose independent rect. 4 19
658 27.71 atmosphere 1015.0 10 < th dose independent rect. 4 19
661 27.71 radiation 1.0 10 < th dose dependent rect. 23 5
671 27.72 wind 1.0 270 > th dose independent rect. 13 8
675 27.72 temperature 30.0 1440 > th dose dependent rect. 16 3
712 27.74 wind 9.0 270 < th dose independent rect. 21 16
730 27.75 temperature 30.0 1440 < th dose independent rect. 18 6
733 27.75 humidity 50.0 270 > th dose dependent rect. 3 3
737 27.76 humidity 50.0 270 > th dose independent rect. 21 16
742 27.77 wind 1.0 270 > th dose independent rect. 19 7
781 27.79 radiation 20.0 1440 > th dose independent rect. 16 15
787 27.80 radiation 1.0 720 > th dose independent rect. 18 1
804 27.80 radiation 40.0 270 < th dose dependent rect. 3 3
812 27.81 temperature 10.0 270 > th dose independent rect. 13 8
813 27.81 temperature 10.0 270 > th dose independent rect. 21 16
814 27.81 atmosphere 995.0 270 > th dose independent rect. 21 16
827 27.82 wind 1.0 270 > th dose independent rect. 8 17
834 27.83 wind 1.0 90 > th dose independent rect. 23 16
871 27.86 precipitation 0.1 10 < th dose independent rect. 23 5
875 27.86 atmosphere 1015.0 270 < th dose independent rect. 8 17
879 27.86 precipitation 0.1 10 < th dose dependent rect. 23 5
880 27.87 wind 9.0 270 < th dose independent rect. 13 8
889 27.88 atmosphere 1015.0 270 < th dose independent rect. 13 8
919 27.90 radiation 1.0 10 < th dose dependent rect. 21 9
920 27.90 radiation 1.0 10 < th dose dependent rect. 21 11
957 27.93 radiation 20.0 1440 > th dose independent rect. 16 1
986 27.94 temperature 30.0 1440 > th dose dependent sin 12 NA