Os06g0714500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os06g0714500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.99 | 0.188 | 11.3 | 1.9 | 0.319 | -0.676 | -0.15 | 2.41 | 0.412 | 22.5 | 10.79 | 1145 | -- | -- |
| 20.75 | 0.212 | 11.3 | 1.57 | 0.253 | -0.67 | 0.0656 | -- | 0.373 | 22.4 | 9.322 | 8972 | -- | -- |
| 16.05 | 0.187 | 11.3 | 1.9 | 0.3 | -0.664 | -- | 2.35 | 0.411 | 22.5 | 10.82 | 1211 | -- | -- |
| 20.71 | 0.212 | 11.3 | 1.56 | 0.268 | -0.645 | -- | -- | 0.36 | 22 | 9.544 | 9101 | -- | -- |
| 20.23 | 0.209 | 11.2 | 1.94 | -- | -0.612 | -- | 2.4 | 0.417 | -- | 7.515 | 1500 | -- | -- |
| 27.29 | 0.245 | 11.3 | 1.21 | 0.254 | -- | 0.0557 | -- | 0.166 | 21.9 | -- | -- | -- | -- |
| 27.3 | 0.245 | 11.3 | 1.21 | 0.254 | -- | -- | -- | 0.166 | 21.8 | -- | -- | -- | -- |
| 24.84 | 0.232 | 11.3 | 1.55 | -- | -0.626 | -- | -- | 0.352 | -- | 9.942 | 8812 | -- | -- |
| 45.48 | 0.314 | 11.4 | -- | 0.244 | 0.728 | -- | -- | -0.186 | 21.8 | 6.354 | 47520 | -- | -- |
| 31.14 | 0.261 | 11.3 | 1.21 | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
| 65.94 | 0.38 | 11.4 | -- | 0.258 | -- | -- | -- | 0.0311 | 22.2 | -- | -- | -- | -- |
| 47.88 | 0.322 | 11.4 | -- | -- | 0.71 | -- | -- | -0.212 | -- | 17.9 | 47520 | -- | -- |
| 69.98 | 0.39 | 11.4 | -- | -- | -- | -- | -- | 0.0312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 11 | 15.90 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 14 | 15.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 19 | 15.95 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 33 | 16.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 49 | 16.08 | temperature | 10 | 1440 | > th | dose dependent | sin | 16 | NA |
| 50 | 16.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 13 |
| 63 | 16.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 11 |
| 74 | 16.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 17 |
| 89 | 16.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 8 |
| 160 | 16.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 22 |
| 163 | 16.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 203 | 16.18 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 255 | 16.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 256 | 16.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 286 | 16.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 393 | 16.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 423 | 16.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 473 | 16.28 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 590 | 16.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 20 |
| 591 | 16.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 655 | 16.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 659 | 16.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 687 | 16.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 719 | 16.39 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 720 | 16.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 738 | 16.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 749 | 16.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 817 | 16.42 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 818 | 16.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 878 | 16.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 948 | 16.46 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 976 | 16.47 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |