Os02g0325100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0325100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.68 | 0.146 | 13.5 | 0.53 | 0.125 | -0.188 | 0.0861 | 0.0356 | 0.104 | 20.1 | 1008 | 9404 | -- | -- |
| 9.68 | 0.145 | 13.5 | 0.526 | 0.126 | -0.185 | 0.0869 | -- | 0.101 | 20.1 | 1008 | 8981 | -- | -- |
| 9.7 | 0.145 | 13.5 | 0.529 | 0.126 | -0.188 | -- | 0.0341 | 0.105 | 20 | 1008 | 9399 | -- | -- |
| 9.7 | 0.145 | 13.5 | 0.521 | 0.126 | -0.185 | -- | -- | 0.099 | 20 | 1008 | 8981 | -- | -- |
| 10.56 | 0.151 | 13.5 | 0.538 | -- | -0.191 | -- | 0.0534 | 0.105 | -- | 1008 | 9502 | -- | -- |
| 10.89 | 0.155 | 13.5 | 0.464 | 0.129 | -- | 0.0723 | -- | 0.09 | 19.8 | -- | -- | -- | -- |
| 10.9 | 0.155 | 13.5 | 0.462 | 0.129 | -- | -- | -- | 0.0901 | 19.7 | -- | -- | -- | -- |
| 10.56 | 0.151 | 13.5 | 0.518 | -- | -0.189 | -- | -- | 0.102 | -- | 1008 | 9499 | -- | -- |
| 16.06 | 0.187 | 13.5 | -- | 0.13 | -0.119 | -- | -- | 0.0257 | 19.5 | 1006 | 8063 | -- | -- |
| 11.81 | 0.161 | 13.5 | 0.461 | -- | -- | -- | -- | 0.0882 | -- | -- | -- | -- | -- |
| 16.54 | 0.19 | 13.5 | -- | 0.126 | -- | -- | -- | 0.0386 | 20 | -- | -- | -- | -- |
| 16.89 | 0.191 | 13.5 | -- | -- | -0.121 | -- | -- | 0.0263 | -- | 1006 | 8236 | -- | -- |
| 17.41 | 0.195 | 13.5 | -- | -- | -- | -- | -- | 0.0371 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 3 |
| 44 | 9.55 | radiation | 20 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 61 | 9.57 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 105 | 9.64 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 119 | 9.66 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 120 | 9.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 131 | 9.66 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 135 | 9.67 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 145 | 9.68 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 162 | 9.69 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 163 | 9.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 169 | 9.69 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 189 | 9.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 237 | 9.73 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 279 | 9.75 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 281 | 9.75 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 312 | 9.76 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 336 | 9.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 341 | 9.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 370 | 9.78 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 389 | 9.78 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 18 |
| 396 | 9.78 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 415 | 9.79 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 416 | 9.79 | radiation | 1 | 1440 | < th | dose dependent | sin | 16 | NA |
| 418 | 9.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 432 | 9.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 486 | 9.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 491 | 9.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 549 | 9.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 555 | 9.81 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 556 | 9.81 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 605 | 9.81 | wind | 1 | 30 | < th | dose dependent | rect. | 11 | 16 |
| 655 | 9.82 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 696 | 9.83 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 737 | 9.84 | radiation | 1 | 1440 | > th | dose independent | sin | 17 | NA |
| 738 | 9.84 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 742 | 9.84 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 766 | 9.84 | wind | 1 | 30 | < th | dose dependent | rect. | 13 | 14 |
| 786 | 9.85 | radiation | 1 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 812 | 9.85 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 825 | 9.85 | wind | 1 | 30 | < th | dose dependent | rect. | 21 | 6 |
| 870 | 9.86 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 924 | 9.86 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 4 |
| 933 | 9.86 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 965 | 9.86 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 967 | 9.87 | radiation | 1 | 1440 | < th | dose independent | sin | 16 | NA |
| 974 | 9.87 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 23 | 4 |
| 978 | 9.87 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 6 |