Os02g0649700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M41, FtsH extracellular domain containing protein.
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Os02g0649700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M41, FtsH extracellular domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.12 | 0.245 | 12.9 | -0.65 | 1.16 | 0.313 | 0.419 | 0.0543 | -0.253 | 7.5 | 10.08 | 10 | -- | -- |
| 27.13 | 0.243 | 12.9 | -0.649 | 1.16 | 0.311 | 0.453 | -- | -0.253 | 7.51 | 10.09 | 9 | -- | -- |
| 27.52 | 0.244 | 12.9 | -0.643 | 1.17 | 0.314 | -- | 0.17 | -0.255 | 7.46 | 10.12 | 9 | -- | -- |
| 27.69 | 0.245 | 12.9 | -0.639 | 1.16 | 0.321 | -- | -- | -0.254 | 7.46 | 10.09 | 9 | -- | -- |
| 86.19 | 0.432 | 13 | -0.561 | -- | 0.616 | -- | 0.0386 | -0.251 | -- | 5.13 | 7 | -- | -- |
| 30.5 | 0.259 | 12.9 | -0.623 | 1.3 | -- | 0.513 | -- | -0.258 | 8.39 | -- | -- | -- | -- |
| 31.33 | 0.262 | 12.9 | -0.608 | 1.3 | -- | -- | -- | -0.259 | 8.37 | -- | -- | -- | -- |
| 85.24 | 0.432 | 13 | -0.57 | -- | 0.597 | -- | -- | -0.258 | -- | 4.85 | 6 | -- | -- |
| 37.28 | 0.284 | 12.9 | -- | 1.16 | 0.272 | -- | -- | -0.204 | 7.62 | 9.76 | 8 | -- | -- |
| 125.65 | 0.524 | 13 | -0.6 | -- | -- | -- | -- | -0.245 | -- | -- | -- | -- | -- |
| 41.05 | 0.3 | 12.9 | -- | 1.3 | -- | -- | -- | -0.191 | 8.41 | -- | -- | -- | -- |
| 92.84 | 0.449 | 13 | -- | -- | 0.621 | -- | -- | -0.203 | -- | 4.82 | 4 | -- | -- |
| 135.14 | 0.543 | 13 | -- | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 16 | 15 |
| 39 | 25.46 | radiation | 10.0 | 10 | < th | dose independent | rect. | 24 | 23 |
| 41 | 25.49 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 65 | 25.76 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 69 | 25.81 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 9 |
| 81 | 25.93 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 9 |
| 82 | 25.93 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 84 | 25.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 85 | 25.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 89 | 25.97 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 15 |
| 99 | 26.04 | temperature | 20.0 | 10 | < th | dose independent | sin | 11 | NA |
| 105 | 26.07 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 106 | 26.08 | temperature | 20.0 | 10 | < th | dose independent | rect. | 21 | 9 |
| 125 | 26.13 | radiation | 20.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 133 | 26.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 146 | 26.20 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 8 |
| 148 | 26.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 149 | 26.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 152 | 26.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 155 | 26.21 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 158 | 26.22 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 160 | 26.23 | radiation | 30.0 | 90 | < th | dose independent | rect. | 13 | 8 |
| 161 | 26.23 | wind | 1.0 | 90 | > th | dose independent | rect. | 21 | 18 |
| 176 | 26.27 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 12 |
| 182 | 26.28 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 184 | 26.29 | radiation | 10.0 | 10 | < th | dose independent | sin | 22 | NA |
| 185 | 26.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 190 | 26.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 193 | 26.30 | temperature | 20.0 | 10 | > th | dose independent | sin | 11 | NA |
| 205 | 26.30 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 207 | 26.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 208 | 26.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 215 | 26.31 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 17 |
| 223 | 26.32 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 12 |
| 238 | 26.34 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 251 | 26.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 8 |
| 267 | 26.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 276 | 26.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 294 | 26.40 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 302 | 26.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 15 |
| 304 | 26.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 309 | 26.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 15 |
| 326 | 26.42 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 330 | 26.42 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 12 |
| 367 | 26.45 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 369 | 26.45 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 378 | 26.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 384 | 26.45 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 24 | 21 |
| 394 | 26.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 395 | 26.46 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 409 | 26.48 | radiation | 10.0 | 10 | > th | dose independent | sin | 22 | NA |
| 410 | 26.48 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 420 | 26.48 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 448 | 26.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 457 | 26.51 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 468 | 26.51 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 498 | 26.53 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 508 | 26.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 518 | 26.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 519 | 26.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 520 | 26.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 522 | 26.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 524 | 26.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 9 |
| 525 | 26.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 528 | 26.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 15 |
| 532 | 26.55 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 536 | 26.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 540 | 26.56 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 544 | 26.56 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 547 | 26.56 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 5 |
| 552 | 26.57 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 553 | 26.57 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 554 | 26.57 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 560 | 26.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 21 |
| 565 | 26.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 21 |
| 567 | 26.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 579 | 26.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 596 | 26.60 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 8 |
| 625 | 26.63 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 626 | 26.63 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 640 | 26.64 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 649 | 26.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 652 | 26.65 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 696 | 26.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 700 | 26.68 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 10 |
| 712 | 26.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 724 | 26.69 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 727 | 26.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 735 | 26.69 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 766 | 26.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 767 | 26.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 773 | 26.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 775 | 26.71 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 790 | 26.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 791 | 26.72 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 792 | 26.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 804 | 26.72 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 806 | 26.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 819 | 26.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 9 |
| 825 | 26.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 21 |
| 828 | 26.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 834 | 26.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 836 | 26.74 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 852 | 26.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 863 | 26.75 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 915 | 26.78 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 9 |
| 930 | 26.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 984 | 26.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 17 |