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Os02g0205300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to TAT-binding protein homolog (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.93 (0.0148) R2 : 0.217
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.351 (0.0312) R2dN8 : 0.281 R2N8 : 0.217
σ : 0.279
deviance : 35.65
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_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.49 0.242 9.94 -0.164 0.222 0.472 0.329 0.882 -0.427 9.35 70 6310 -- --
27.74 0.245 9.94 -0.175 0.22 0.49 0.293 -- -0.441 9.08 70.09 6336 -- --
26.83 0.241 9.94 -0.159 0.219 0.486 -- 0.86 -0.426 8.92 70 6268 -- --
27.88 0.246 9.94 -0.2 0.231 0.523 -- -- -0.457 8.73 70 6309 -- --
29.31 0.252 9.95 -0.159 -- 0.464 -- 0.91 -0.421 -- 70 6120 -- --
31.95 0.265 9.93 -0.241 0.182 -- 0.289 -- -0.377 9.92 -- -- -- --
32.25 0.266 9.93 -0.23 0.183 -- -- -- -0.377 9.49 -- -- -- --
30.17 0.256 9.95 -0.18 -- 0.502 -- -- -0.458 -- 69.93 7183 -- --
28.92 0.25 9.94 -- 0.231 0.541 -- -- -0.444 8.84 70.58 6331 -- --
34.23 0.273 9.93 -0.231 -- -- -- -- -0.376 -- -- -- -- --
33.65 0.271 9.92 -- 0.184 -- -- -- -0.351 9.59 -- -- -- --
31.01 0.259 9.95 -- -- 0.524 -- -- -0.445 -- 69.4 7280 -- --
35.65 0.279 9.93 -- -- -- -- -- -0.351 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.93 wind 9.0 14400 < th dose independent rect. 6 5
3 25.36 wind 3.0 14400 < th dose dependent rect. 2 5
5 25.41 wind 3.0 14400 < th dose dependent rect. 23 8
9 25.50 humidity 90.0 14400 > th dose dependent rect. 7 3
10 25.50 wind 3.0 14400 < th dose dependent rect. 21 10
15 25.53 precipitation 0.1 14400 > th dose independent rect. 17 1
18 25.57 precipitation 0.1 14400 > th dose independent rect. 15 1
19 25.57 precipitation 0.1 14400 > th dose dependent rect. 15 1
23 25.61 humidity 80.0 14400 > th dose independent rect. 10 1
25 25.62 precipitation 0.1 14400 < th dose independent rect. 15 1
27 25.62 precipitation 0.1 14400 < th dose dependent rect. 15 1
28 25.63 humidity 80.0 14400 < th dose independent rect. 10 1
33 25.65 wind 9.0 14400 < th dose independent rect. 10 1
35 25.66 precipitation 0.1 14400 > th dose dependent rect. 3 14
37 25.68 wind 3.0 14400 < th dose independent rect. 22 8
38 25.68 precipitation 0.1 14400 > th dose dependent rect. 17 1
41 25.69 precipitation 0.1 4320 > th dose independent rect. 1 16
45 25.70 humidity 80.0 14400 > th dose independent rect. 13 1
47 25.71 precipitation 0.1 4320 < th dose independent rect. 1 16
49 25.71 precipitation 0.1 4320 < th dose dependent rect. 1 16
67 25.78 precipitation 0.1 14400 > th dose dependent rect. 4 2
72 25.80 humidity 80.0 14400 > th dose dependent rect. 13 1
76 25.84 precipitation 0.1 14400 < th dose independent rect. 17 1
78 25.84 precipitation 0.1 14400 < th dose dependent rect. 17 1
95 25.89 precipitation 0.1 14400 > th dose independent rect. 4 2
100 25.90 precipitation 0.1 14400 > th dose independent rect. 14 3
101 25.90 humidity 80.0 14400 > th dose independent rect. 9 5
112 25.91 wind 3.0 14400 > th dose independent rect. 22 8
116 25.91 precipitation 0.1 4320 > th dose dependent rect. 1 16
123 25.93 humidity 80.0 14400 > th dose dependent rect. 8 8
130 25.94 humidity 80.0 14400 > th dose dependent rect. 9 6
144 25.97 humidity 90.0 14400 > th dose independent rect. 7 1
151 25.98 precipitation 0.1 14400 > th dose dependent rect. 14 3
154 25.99 wind 9.0 14400 > th dose independent rect. 10 1
155 25.99 precipitation 0.1 14400 < th dose independent rect. 4 2
158 25.99 precipitation 0.1 14400 < th dose dependent rect. 4 2
179 26.03 humidity 80.0 14400 < th dose independent rect. 9 5
187 26.04 wind 3.0 14400 < th dose dependent sin 8 NA
211 26.08 precipitation 0.1 4320 < th dose independent rect. 2 8
217 26.08 precipitation 0.1 4320 > th dose dependent rect. 2 8
218 26.08 precipitation 0.1 4320 < th dose dependent rect. 2 8
239 26.10 wind 1.0 14400 > th dose dependent rect. 23 8
252 26.12 wind 3.0 14400 > th dose independent rect. 5 1
255 26.12 precipitation 0.1 4320 > th dose independent rect. 2 8
281 26.14 wind 3.0 14400 < th dose independent rect. 5 1
288 26.14 precipitation 0.1 14400 > th dose dependent rect. 3 11
311 26.16 precipitation 0.1 14400 > th dose dependent rect. 9 8
317 26.17 humidity 80.0 14400 < th dose independent rect. 13 1
327 26.18 wind 3.0 14400 > th dose independent rect. 3 4
346 26.19 humidity 80.0 1440 < th dose independent rect. 3 9
362 26.20 precipitation 0.1 14400 > th dose dependent rect. 7 10
367 26.21 humidity 90.0 14400 > th dose independent rect. 7 3
407 26.23 precipitation 0.1 14400 < th dose independent rect. 9 8
420 26.23 precipitation 0.1 14400 < th dose dependent rect. 9 8
468 26.26 wind 9.0 14400 > th dose independent rect. 7 4
515 26.29 wind 1.0 14400 > th dose dependent rect. 1 3
538 26.31 precipitation 0.1 14400 > th dose independent rect. 2 18
539 26.31 precipitation 0.1 14400 < th dose independent rect. 2 18
540 26.31 humidity 90.0 14400 > th dose dependent rect. 16 1
546 26.31 precipitation 0.1 14400 < th dose dependent rect. 2 18
563 26.33 precipitation 0.1 14400 > th dose independent rect. 7 10
564 26.33 precipitation 0.1 14400 < th dose independent rect. 7 10
573 26.33 precipitation 0.1 14400 < th dose dependent rect. 7 10
593 26.35 precipitation 0.1 1440 < th dose independent rect. 5 4
598 26.35 wind 1.0 14400 > th dose independent rect. 3 9
603 26.35 precipitation 0.1 1440 < th dose dependent rect. 5 4
623 26.37 humidity 80.0 1440 > th dose independent rect. 3 9
641 26.38 precipitation 0.1 14400 > th dose independent rect. 23 21
657 26.39 precipitation 0.1 1440 < th dose independent rect. 5 7
671 26.39 precipitation 0.1 1440 < th dose dependent rect. 5 7
726 26.43 wind 1.0 14400 > th dose dependent rect. 5 1
735 26.44 precipitation 0.1 14400 > th dose independent sin 2 NA
736 26.44 precipitation 0.1 14400 < th dose independent sin 2 NA
745 26.44 precipitation 0.1 14400 < th dose dependent sin 2 NA
810 26.48 humidity 90.0 14400 < th dose dependent rect. 11 4
816 26.49 precipitation 0.1 4320 > th dose independent sin 4 NA
817 26.49 precipitation 0.1 4320 < th dose independent sin 4 NA
824 26.49 precipitation 0.1 4320 < th dose dependent sin 4 NA
825 26.49 humidity 90.0 14400 < th dose dependent rect. 11 1
906 26.54 precipitation 0.1 14400 > th dose dependent sin 3 NA
907 26.54 precipitation 0.1 4320 > th dose dependent sin 6 NA
923 26.55 wind 3.0 14400 < th dose independent sin 8 NA
933 26.56 precipitation 0.1 14400 < th dose independent rect. 7 1
945 26.56 precipitation 0.1 14400 < th dose dependent rect. 7 1
950 26.56 humidity 90.0 14400 < th dose dependent rect. 8 7
960 26.57 humidity 50.0 14400 > th dose dependent rect. 11 1
961 26.57 humidity 90.0 14400 < th dose dependent rect. 14 1