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Os03g0344700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : AAA ATPase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0119) R2 : 0.72
β1 : -0.807 (0.0435) R2dD : 0.219 R2D : 0.17
β2 : 0.895 (0.0307) R2dC : 0.524 R2C : 0.494
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.172 (0.0254) R2dN8 : 0.0379 R2N8 : -0.00883
σ : 0.223
deviance : 22.77
__
_____
C
peak time of C : 4.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.66 0.214 11.4 -0.496 0.9 0.27 -0.163 -0.359 -0.05 4.68 19.81 11799 -- --
20.71 0.212 11.4 -0.473 0.891 0.36 -0.162 -- -0.0328 4.67 20.29 15866 -- --
20.71 0.212 11.4 -0.484 0.9 0.269 -- -0.328 -0.0437 4.69 20 14397 -- --
20.75 0.212 11.4 -0.484 0.893 0.357 -- -- -0.0425 4.68 20.3 15923 -- --
63.37 0.373 11.5 -0.699 -- 0.199 -- -0.125 -0.107 -- 20 14397 -- --
22.71 0.223 11.5 -0.808 0.896 -- -0.16 -- -0.173 4.69 -- -- -- --
22.77 0.223 11.5 -0.807 0.895 -- -- -- -0.172 4.7 -- -- -- --
63.43 0.373 11.5 -0.723 -- 0.213 -- -- -0.114 -- 19.89 14833 -- --
21.82 0.218 11.4 -- 0.901 0.687 -- -- 0.0755 4.67 18.16 47520 -- --
65.28 0.378 11.5 -0.773 -- -- -- -- -0.149 -- -- -- -- --
39.92 0.296 11.4 -- 0.88 -- -- -- -0.0823 4.73 -- -- -- --
64.89 0.375 11.4 -- -- 0.651 -- -- 0.0856 -- 18.09 47520 -- --
81.04 0.42 11.5 -- -- -- -- -- -0.063 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.77 radiation 1.0 270 > th dose independent rect. 7 10
2 19.82 radiation 1.0 270 < th dose dependent rect. 3 17
3 19.85 precipitation 0.1 14400 > th dose independent rect. 7 1
4 19.85 precipitation 0.1 14400 > th dose dependent rect. 7 1
5 19.89 radiation 1.0 270 < th dose independent rect. 3 17
6 19.90 wind 1.0 43200 < th dose independent rect. 15 14
9 19.92 wind 1.0 43200 > th dose independent rect. 15 14
11 19.95 humidity 50.0 43200 < th dose dependent rect. 8 2
13 19.96 humidity 50.0 43200 < th dose dependent rect. 4 6
20 19.97 radiation 1.0 270 > th dose independent sin 1 NA
22 19.97 humidity 50.0 43200 < th dose dependent rect. 6 4
29 20.01 wind 1.0 43200 > th dose independent rect. 17 19
31 20.02 wind 1.0 43200 > th dose independent rect. 19 17
36 20.06 precipitation 0.1 14400 < th dose independent rect. 7 1
37 20.06 precipitation 0.1 14400 < th dose dependent rect. 7 1
46 20.09 wind 5.0 14400 < th dose independent rect. 5 1
50 20.11 wind 5.0 14400 > th dose independent rect. 5 1
51 20.11 humidity 80.0 43200 < th dose independent rect. 6 1
53 20.12 wind 3.0 14400 > th dose dependent rect. 5 1
54 20.13 wind 9.0 90 < th dose independent rect. 8 9
55 20.13 humidity 50.0 270 > th dose independent rect. 7 9
60 20.15 humidity 80.0 43200 > th dose independent rect. 6 1
61 20.15 wind 3.0 43200 < th dose independent rect. 6 3
62 20.15 humidity 60.0 43200 > th dose independent rect. 24 8
64 20.15 precipitation 0.1 14400 > th dose dependent rect. 3 7
69 20.17 humidity 80.0 43200 < th dose independent rect. 5 3
70 20.17 humidity 60.0 43200 < th dose independent rect. 24 8
81 20.18 wind 9.0 14400 > th dose dependent rect. 10 1
82 20.18 humidity 80.0 43200 < th dose dependent rect. 3 5
86 20.18 radiation 40.0 270 < th dose dependent rect. 15 16
87 20.19 wind 9.0 14400 > th dose independent rect. 18 1
93 20.19 wind 1.0 43200 < th dose dependent rect. 9 23
94 20.20 wind 1.0 43200 > th dose independent sin 14 NA
96 20.20 wind 3.0 43200 > th dose independent rect. 6 3
99 20.20 wind 1.0 30 > th dose independent rect. 17 15
103 20.21 wind 9.0 14400 < th dose independent rect. 18 1
105 20.21 precipitation 0.1 14400 > th dose independent rect. 3 7
110 20.22 wind 1.0 4320 > th dose independent rect. 23 1
113 20.22 wind 1.0 90 > th dose independent rect. 8 9
115 20.22 radiation 1.0 270 < th dose independent rect. 1 21
118 20.22 wind 1.0 43200 < th dose dependent rect. 9 21
120 20.22 wind 1.0 43200 < th dose dependent rect. 6 23
124 20.23 precipitation 0.1 90 < th dose independent rect. 8 9
125 20.23 precipitation 0.1 90 < th dose dependent rect. 8 9
126 20.23 wind 1.0 43200 < th dose dependent rect. 15 22
133 20.24 wind 7.0 14400 > th dose dependent rect. 5 7
139 20.25 precipitation 0.1 14400 < th dose independent rect. 3 7
140 20.25 temperature 10.0 90 > th dose independent rect. 8 9
141 20.25 atmosphere 1015.0 90 < th dose independent rect. 8 9
144 20.25 wind 9.0 90 < th dose independent rect. 17 15
145 20.25 temperature 10.0 90 > th dose independent rect. 17 15
151 20.25 precipitation 0.1 14400 < th dose dependent rect. 3 7
158 20.26 radiation 40.0 90 < th dose independent rect. 17 15
164 20.26 wind 1.0 43200 < th dose dependent rect. 3 23
165 20.27 temperature 15.0 14400 < th dose independent rect. 9 1
169 20.27 wind 5.0 43200 < th dose dependent rect. 6 1
171 20.27 wind 3.0 43200 < th dose dependent rect. 3 6
173 20.27 wind 1.0 43200 < th dose dependent rect. 19 23
174 20.28 radiation 1.0 270 < th dose independent sin 0 NA
176 20.28 humidity 80.0 14400 > th dose independent rect. 15 1
180 20.28 wind 7.0 14400 > th dose independent rect. 5 7
182 20.28 wind 7.0 14400 > th dose independent rect. 3 10
183 20.28 humidity 50.0 90 > th dose independent rect. 17 15
188 20.28 radiation 1.0 270 < th dose dependent rect. 1 21
191 20.29 temperature 15.0 14400 > th dose independent rect. 9 1
195 20.29 radiation 1.0 14400 < th dose independent rect. 7 3
199 20.29 wind 7.0 14400 < th dose independent rect. 4 9
205 20.29 wind 1.0 43200 < th dose dependent no NA NA
212 20.29 wind 7.0 14400 > th dose dependent rect. 24 12
217 20.30 wind 7.0 14400 < th dose independent rect. 5 7
232 20.30 wind 1.0 43200 < th dose dependent rect. 21 23
233 20.31 radiation 1.0 14400 < th dose independent rect. 7 1
234 20.31 wind 9.0 14400 < th dose independent rect. 9 2
236 20.31 radiation 1.0 14400 > th dose independent rect. 7 3
238 20.31 temperature 15.0 14400 > th dose independent rect. 7 4
249 20.31 radiation 1.0 270 < th dose dependent sin 0 NA
269 20.32 wind 1.0 43200 < th dose independent sin 14 NA
271 20.32 radiation 1.0 14400 > th dose independent rect. 7 1
278 20.32 atmosphere 995.0 90 > th dose independent rect. 17 15
279 20.32 humidity 90.0 14400 > th dose independent rect. 1 17
280 20.32 radiation 1.0 270 < th dose dependent rect. 15 4
287 20.32 wind 1.0 43200 < th dose dependent rect. 12 17
288 20.32 radiation 20.0 90 < th dose dependent rect. 4 19
290 20.32 wind 1.0 43200 < th dose dependent rect. 24 23
291 20.33 atmosphere 1005.0 14400 < th dose independent rect. 17 1
293 20.33 wind 7.0 14400 > th dose independent rect. 7 5
294 20.33 humidity 50.0 43200 > th dose independent rect. 24 5
304 20.33 precipitation 0.1 90 < th dose independent rect. 17 15
306 20.33 humidity 80.0 270 > th dose independent rect. 2 17
307 20.33 wind 1.0 43200 < th dose independent rect. 19 18
310 20.33 wind 3.0 43200 < th dose dependent rect. 6 3
315 20.33 precipitation 0.1 90 < th dose dependent rect. 17 15
324 20.34 wind 7.0 14400 > th dose independent rect. 10 2
330 20.34 wind 7.0 14400 < th dose independent rect. 7 5
332 20.34 humidity 90.0 90 < th dose independent rect. 8 9
347 20.34 temperature 10.0 90 > th dose dependent rect. 8 9
360 20.35 wind 1.0 43200 < th dose independent rect. 17 20
396 20.36 wind 1.0 43200 < th dose independent rect. 11 19
407 20.37 wind 1.0 43200 > th dose independent rect. 1 1
414 20.37 temperature 10.0 1440 > th dose independent rect. 9 9
421 20.37 temperature 10.0 1440 > th dose independent rect. 18 15
424 20.37 humidity 50.0 1440 > th dose independent rect. 18 15
430 20.37 radiation 10.0 4320 > th dose dependent rect. 17 1
457 20.38 temperature 15.0 14400 > th dose independent rect. 6 6
460 20.38 atmosphere 995.0 90 > th dose independent rect. 8 9
466 20.38 humidity 90.0 14400 > th dose independent rect. 1 13
473 20.38 wind 1.0 43200 > th dose independent rect. 11 19
496 20.39 humidity 70.0 43200 < th dose independent rect. 20 11
503 20.39 temperature 10.0 14400 > th dose dependent rect. 8 1
504 20.39 temperature 30.0 14400 < th dose dependent rect. 8 1
525 20.40 atmosphere 1005.0 14400 > th dose independent rect. 17 1
532 20.40 temperature 15.0 14400 < th dose independent rect. 5 7
533 20.40 humidity 90.0 14400 > th dose independent rect. 3 7
534 20.40 humidity 90.0 14400 > th dose independent rect. 1 9
540 20.40 humidity 90.0 14400 < th dose independent rect. 2 15
543 20.40 wind 9.0 14400 > th dose dependent rect. 18 1
562 20.41 humidity 80.0 14400 < th dose independent rect. 14 2
613 20.42 humidity 90.0 14400 > th dose independent sin 3 NA
623 20.42 temperature 20.0 14400 < th dose independent rect. 13 8
651 20.42 temperature 20.0 30 > th dose dependent rect. 11 17
656 20.43 temperature 20.0 14400 > th dose independent rect. 18 1
715 20.43 radiation 1.0 270 < th dose dependent rect. 10 9
718 20.43 wind 1.0 43200 < th dose dependent rect. 19 18
723 20.44 radiation 20.0 4320 < th dose independent rect. 6 1
779 20.45 wind 9.0 14400 < th dose independent rect. 24 4
801 20.45 radiation 20.0 270 < th dose independent rect. 15 16
815 20.45 humidity 90.0 14400 > th dose dependent rect. 6 3
842 20.46 temperature 20.0 14400 < th dose independent rect. 18 3
845 20.46 wind 1.0 43200 > th dose independent rect. 23 5
854 20.46 wind 1.0 14400 > th dose independent rect. 21 8
865 20.46 wind 1.0 14400 > th dose independent rect. 18 13
878 20.46 temperature 30.0 14400 < th dose dependent rect. 13 1
903 20.47 temperature 20.0 14400 < th dose independent rect. 20 1
912 20.47 radiation 1.0 270 < th dose independent rect. 14 5
921 20.47 humidity 90.0 14400 < th dose independent rect. 2 10
990 20.48 radiation 20.0 14400 < th dose independent rect. 21 9