Os06g0173100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1).
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Os06g0173100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.67 | 0.203 | 9.58 | -0.406 | 0.516 | 0.895 | -0.117 | -1.02 | -0.136 | 8.37 | 13.07 | 596 | -- | -- |
| 19.34 | 0.205 | 9.56 | -0.234 | 0.533 | 0.887 | 0.0707 | -- | -0.0905 | 8.16 | 14.11 | 542 | -- | -- |
| 18.7 | 0.201 | 9.58 | -0.392 | 0.517 | 0.898 | -- | -0.923 | -0.131 | 8.37 | 13.09 | 587 | -- | -- |
| 19.34 | 0.205 | 9.56 | -0.232 | 0.52 | 0.884 | -- | -- | -0.0891 | 8.27 | 14.21 | 566 | -- | -- |
| 25.44 | 0.235 | 9.6 | -0.454 | -- | 0.671 | -- | -0.989 | -0.133 | -- | 13.14 | 1471 | -- | -- |
| 28.51 | 0.25 | 9.53 | -0.0257 | 0.304 | -- | 0.056 | -- | 0.0442 | 9.14 | -- | -- | -- | -- |
| 28.52 | 0.25 | 9.53 | -0.0239 | 0.304 | -- | -- | -- | 0.0441 | 9.08 | -- | -- | -- | -- |
| 25.83 | 0.238 | 9.56 | -0.16 | -- | 0.742 | -- | -- | -0.0537 | -- | 14.21 | 566 | -- | -- |
| 20.59 | 0.211 | 9.55 | -- | 0.49 | 0.78 | -- | -- | -0.0506 | 8.12 | 14.69 | 499 | -- | -- |
| 33.84 | 0.272 | 9.54 | -0.0245 | -- | -- | -- | -- | 0.0458 | -- | -- | -- | -- | -- |
| 28.53 | 0.25 | 9.53 | -- | 0.304 | -- | -- | -- | 0.0467 | 9.09 | -- | -- | -- | -- |
| 26.47 | 0.24 | 9.56 | -- | -- | 0.692 | -- | -- | -0.0303 | -- | 14.21 | 566 | -- | -- |
| 33.85 | 0.272 | 9.54 | -- | -- | -- | -- | -- | 0.0485 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 5 | 16.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 37 | 17.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 38 | 17.67 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 66 | 17.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 69 | 17.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 81 | 17.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 87 | 17.98 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 88 | 17.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 106 | 18.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 117 | 18.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 141 | 18.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 177 | 18.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 16 |
| 246 | 18.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 350 | 18.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 365 | 18.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 372 | 18.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 5 |
| 389 | 18.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 404 | 18.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 409 | 18.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 557 | 18.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 577 | 18.93 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 598 | 18.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 771 | 19.04 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 19 |
| 881 | 19.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 903 | 19.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 917 | 19.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 957 | 19.15 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 992 | 19.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |