Os01g0574400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell division protein ftsH (EC 3.4.24.-).
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Os01g0574400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell division protein ftsH (EC 3.4.24.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.31 | 0.316 | 10.6 | 0.899 | 0.685 | 0.56 | 0.611 | 0.365 | 0.113 | 15.9 | 20.5 | 1070 | -- | -- |
| 45.64 | 0.315 | 10.6 | 0.845 | 0.675 | 0.504 | 0.546 | -- | 0.101 | 15.9 | 20.5 | 1065 | -- | -- |
| 46.35 | 0.317 | 10.6 | 0.879 | 0.69 | 0.563 | -- | 0.252 | 0.109 | 15.9 | 20.52 | 1065 | -- | -- |
| 46.51 | 0.318 | 10.6 | 0.835 | 0.691 | 0.529 | -- | -- | 0.0995 | 15.9 | 20.5 | 1065 | -- | -- |
| 71.21 | 0.393 | 10.6 | 0.881 | -- | 0.555 | -- | 0.408 | 0.0987 | -- | 20.6 | 1854 | -- | -- |
| 52.51 | 0.34 | 10.6 | 1.04 | 0.654 | -- | 0.702 | -- | 0.215 | 16.2 | -- | -- | -- | -- |
| 53.88 | 0.344 | 10.6 | 1.05 | 0.657 | -- | -- | -- | 0.219 | 16.2 | -- | -- | -- | -- |
| 71.48 | 0.394 | 10.6 | 0.798 | -- | 0.505 | -- | -- | 0.089 | -- | 20.6 | 1902 | -- | -- |
| 54.91 | 0.345 | 10.6 | -- | 0.659 | 0.922 | -- | -- | -0.0997 | 16.5 | 18.6 | 44217 | -- | -- |
| 77.27 | 0.411 | 10.6 | 1.02 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 82.77 | 0.426 | 10.6 | -- | 0.637 | -- | -- | -- | 0.103 | 16.2 | -- | -- | -- | -- |
| 77.64 | 0.41 | 10.7 | -- | -- | 0.876 | -- | -- | -0.0847 | -- | 16.97 | 47520 | -- | -- |
| 104.74 | 0.478 | 10.6 | -- | -- | -- | -- | -- | 0.0885 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 3 | 44.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 18 | 45.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 25 | 45.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 26 | 45.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 29 | 45.47 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 41 | 45.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 44 | 45.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 57 | 45.67 | temperature | 25 | 10 | > th | dose dependent | sin | 1 | NA |
| 59 | 45.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 92 | 45.80 | temperature | 25 | 90 | > th | dose dependent | sin | 3 | NA |
| 125 | 45.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 134 | 45.89 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 9 |
| 147 | 45.92 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 149 | 45.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 179 | 45.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 184 | 45.99 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 195 | 46.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 222 | 46.06 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 235 | 46.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 242 | 46.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 272 | 46.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 273 | 46.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 294 | 46.13 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 298 | 46.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 301 | 46.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 320 | 46.15 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 325 | 46.16 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 342 | 46.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 368 | 46.20 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 481 | 46.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 499 | 46.32 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 19 |
| 503 | 46.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 532 | 46.34 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 545 | 46.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 645 | 46.42 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 18 |
| 781 | 46.49 | temperature | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 824 | 46.51 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 861 | 46.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 901 | 46.54 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 908 | 46.55 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |