Os01g0623500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os01g0623500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.17 | 0.5 | 10.2 | 0.888 | 3.04 | -2.41 | -0.116 | -5.86 | 0.527 | 6.66 | 6.79 | 340 | -- | -- |
| 117.04 | 0.504 | 10.1 | 0.825 | 3.11 | -1.36 | -0.154 | -- | 0.567 | 6.68 | 6.201 | 417 | -- | -- |
| 113.2 | 0.496 | 10.2 | 0.886 | 3.04 | -2.41 | -- | -5.94 | 0.527 | 6.67 | 6.783 | 340 | -- | -- |
| 116.6 | 0.503 | 10.1 | 0.8 | 3.05 | -1.12 | -- | -- | 0.544 | 6.72 | 6.296 | 464 | -- | -- |
| 549.38 | 1.1 | 10.2 | 0.551 | -- | 0.565 | -- | -0.916 | 0.526 | -- | 6.783 | 340 | -- | -- |
| 125.91 | 0.526 | 10.2 | 0.615 | 2.88 | -- | -0.00141 | -- | 0.515 | 6.69 | -- | -- | -- | -- |
| 125.91 | 0.525 | 10.2 | 0.615 | 2.88 | -- | -- | -- | 0.515 | 6.69 | -- | -- | -- | -- |
| 361.62 | 0.886 | 10.2 | 0.0545 | -- | 1.93 | -- | -- | 0.641 | -- | 2.953 | 351 | -- | -- |
| 132.03 | 0.535 | 10.2 | -- | 2.99 | -0.685 | -- | -- | 0.452 | 6.7 | 6.268 | 472 | -- | -- |
| 558.8 | 1.1 | 10.2 | 0.682 | -- | -- | -- | -- | 0.572 | -- | -- | -- | -- | -- |
| 135.87 | 0.545 | 10.2 | -- | 2.89 | -- | -- | -- | 0.447 | 6.68 | -- | -- | -- | -- |
| 361.69 | 0.886 | 10.2 | -- | -- | 1.94 | -- | -- | 0.636 | -- | 2.933 | 351 | -- | -- |
| 571.06 | 1.12 | 10.2 | -- | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 2 | 99.25 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 6 | 100.69 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 7 | 100.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 9 | 101.25 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 10 | 101.26 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 15 | 6 |
| 11 | 101.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 16 | 101.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 3 |
| 19 | 101.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 23 | 101.84 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 13 |
| 25 | 101.96 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 3 |
| 30 | 102.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 3 |
| 42 | 102.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 5 |
| 68 | 103.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 84 | 103.85 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 106 | 104.32 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 22 |
| 108 | 104.32 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 109 | 104.33 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 110 | 104.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 16 |
| 112 | 104.38 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 16 |
| 115 | 104.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 125 | 104.64 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 128 | 104.70 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 142 | 104.81 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 3 |
| 147 | 104.86 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 148 | 104.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 5 |
| 151 | 104.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 165 | 105.03 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 167 | 105.04 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 174 | 105.15 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 175 | 105.17 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 3 |
| 187 | 105.30 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 190 | 105.30 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 12 |
| 212 | 105.39 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 216 | 105.39 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 222 | 105.39 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 223 | 105.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 245 | 105.39 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 250 | 105.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 19 |
| 254 | 105.45 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 272 | 105.58 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 22 |
| 274 | 105.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 275 | 105.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 321 | 105.65 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 330 | 105.72 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 12 |
| 340 | 105.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 343 | 105.77 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 348 | 105.79 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 3 |
| 354 | 105.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 3 |
| 364 | 105.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 366 | 105.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 379 | 106.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 3 |
| 383 | 106.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 21 |
| 397 | 106.11 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 400 | 106.11 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 2 |
| 403 | 106.11 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 405 | 106.11 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 411 | 106.11 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 422 | 106.15 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 2 |
| 441 | 106.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 442 | 106.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 443 | 106.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 446 | 106.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 460 | 106.35 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 464 | 106.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 467 | 106.41 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 20 |
| 481 | 106.52 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 492 | 106.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 493 | 106.57 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 3 |
| 496 | 106.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 500 | 106.60 | wind | 1.0 | 270 | > th | dose dependent | rect. | 17 | 3 |
| 507 | 106.63 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 3 |
| 518 | 106.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 6 |
| 519 | 106.68 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 520 | 106.68 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 521 | 106.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 526 | 106.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 13 |
| 528 | 106.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 535 | 106.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 536 | 106.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 537 | 106.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 540 | 106.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 541 | 106.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 547 | 106.78 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 561 | 106.83 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 3 |
| 608 | 107.01 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 611 | 107.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 15 |
| 614 | 107.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 616 | 107.03 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 4 |
| 639 | 107.15 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 17 | 3 |
| 645 | 107.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 3 |
| 655 | 107.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 5 |
| 672 | 107.28 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 675 | 107.30 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 678 | 107.31 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 6 |
| 685 | 107.35 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 2 |
| 708 | 107.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 710 | 107.48 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 738 | 107.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 19 |
| 748 | 107.62 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 18 |
| 797 | 107.74 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 817 | 107.77 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 818 | 107.77 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 17 | 6 |
| 821 | 107.78 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 13 |
| 823 | 107.79 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 850 | 107.82 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 10 |
| 865 | 107.87 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 22 | 21 |
| 871 | 107.89 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 925 | 107.96 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 931 | 107.99 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 932 | 107.99 | wind | 9.0 | 90 | < th | dose dependent | rect. | 22 | 21 |
| 936 | 108.01 | radiation | 20.0 | 90 | < th | dose independent | rect. | 19 | 14 |
| 976 | 108.12 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 986 | 108.16 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 15 |