Os12g0443800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase, central region domain containing protein.
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Os12g0443800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase, central region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.49 | 0.524 | 5.08 | 0.878 | 1.23 | -1.65 | 0.564 | -0.52 | 0.218 | 16.2 | 29.2 | 90 | -- | -- |
| 124.78 | 0.52 | 5.09 | 0.79 | 1.22 | -1.64 | 0.711 | -- | 0.19 | 16.2 | 29.28 | 98 | -- | -- |
| 125.18 | 0.521 | 5.07 | 0.95 | 1.23 | -1.67 | -- | -0.893 | 0.235 | 16.2 | 29.19 | 86 | -- | -- |
| 126.28 | 0.523 | 5.09 | 0.794 | 1.23 | -1.65 | -- | -- | 0.197 | 16.2 | 29.3 | 95 | -- | -- |
| 182.27 | 0.629 | 5.12 | 0.664 | -- | -2.77 | -- | -1.02 | 0.0159 | -- | 30.08 | 115 | -- | -- |
| 160.48 | 0.594 | 5.01 | 1.19 | 1.74 | -- | 0.94 | -- | 0.528 | 15.8 | -- | -- | -- | -- |
| 163.09 | 0.598 | 5.01 | 1.2 | 1.75 | -- | -- | -- | 0.533 | 15.8 | -- | -- | -- | -- |
| 183.9 | 0.632 | 5.12 | 0.492 | -- | -2.8 | -- | -- | -0.011 | -- | 30.41 | 113 | -- | -- |
| 141.05 | 0.553 | 5.12 | -- | 1.14 | -1.97 | -- | -- | 0.0468 | 16.4 | 29.28 | 89 | -- | -- |
| 331.12 | 0.85 | 5.01 | 1.13 | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
| 201.33 | 0.664 | 5.04 | -- | 1.72 | -- | -- | -- | 0.399 | 15.8 | -- | -- | -- | -- |
| 189.83 | 0.642 | 5.14 | -- | -- | -2.94 | -- | -- | -0.0915 | -- | 30.3 | 113 | -- | -- |
| 364.94 | 0.892 | 5.04 | -- | -- | -- | -- | -- | 0.361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 2 | 114.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 3 | 114.92 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 36 | 118.45 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 47 | 119.59 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 99 | 121.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 120 | 121.96 | temperature | 25 | 10 | < th | dose dependent | sin | 22 | NA |
| 137 | 122.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 165 | 123.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 176 | 123.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 222 | 124.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 244 | 124.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 253 | 124.89 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 258 | 124.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 266 | 125.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 281 | 125.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 313 | 125.75 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 316 | 125.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 337 | 125.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 346 | 126.10 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 390 | 126.52 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 430 | 127.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 20 |
| 434 | 127.07 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 21 |
| 447 | 127.24 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 17 |
| 450 | 127.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 453 | 127.28 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 474 | 127.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 509 | 127.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 525 | 127.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 526 | 127.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 558 | 127.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 574 | 128.00 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 610 | 128.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 652 | 128.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 670 | 128.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 695 | 128.40 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 714 | 128.52 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 728 | 128.56 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 756 | 128.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 789 | 128.72 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 21 |
| 798 | 128.79 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 816 | 128.86 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 821 | 128.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 878 | 129.01 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 17 |
| 916 | 129.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 932 | 129.13 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 936 | 129.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 938 | 129.14 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 15 |
| 948 | 129.16 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |