Os02g0740300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os02g0740300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.8 | 0.401 | 5.61 | 0.682 | 0.962 | -2.18 | 0.619 | -1.91 | 0.122 | 12.6 | 24.63 | 1079 | -- | -- |
| 76.75 | 0.408 | 5.64 | 0.405 | 0.985 | -1.89 | 0.29 | -- | 0.0764 | 12.5 | 26.96 | 1051 | -- | -- |
| 74.26 | 0.401 | 5.62 | 0.655 | 0.944 | -2.17 | -- | -1.65 | 0.121 | 12.7 | 24.58 | 1114 | -- | -- |
| 77.05 | 0.409 | 5.66 | 0.378 | 1 | -1.97 | -- | -- | 0.0247 | 12.5 | 26.43 | 1064 | -- | -- |
| 95.32 | 0.457 | 5.64 | 0.787 | -- | -1.98 | -- | -1.74 | 0.12 | -- | 26.1 | 1627 | -- | -- |
| 132.15 | 0.539 | 5.56 | 0.944 | 0.744 | -- | 0.41 | -- | 0.465 | 12.7 | -- | -- | -- | -- |
| 132.86 | 0.54 | 5.56 | 0.959 | 0.742 | -- | -- | -- | 0.466 | 12.6 | -- | -- | -- | -- |
| 85.19 | 0.43 | 5.65 | 0.498 | -- | -2.39 | -- | -- | 0.135 | -- | 35.39 | 4 | -- | -- |
| 80.27 | 0.417 | 5.67 | -- | 0.969 | -2.16 | -- | -- | -0.034 | 12.7 | 25.34 | 1110 | -- | -- |
| 167.4 | 0.605 | 5.58 | 0.933 | -- | -- | -- | -- | 0.454 | -- | -- | -- | -- | -- |
| 157.11 | 0.586 | 5.59 | -- | 0.728 | -- | -- | -- | 0.36 | 12.6 | -- | -- | -- | -- |
| 91.37 | 0.445 | 5.67 | -- | -- | -2.54 | -- | -- | 0.0607 | -- | 48.83 | 3 | -- | -- |
| 190.35 | 0.644 | 5.6 | -- | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 8 | 68.05 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 11 | 68.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 16 | 68.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 62 | 71.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 69 | 72.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 71 | 72.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 82 | 72.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 100 | 72.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 13 |
| 106 | 72.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 107 | 72.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 120 | 72.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 218 | 73.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 229 | 73.04 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 242 | 73.07 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 247 | 73.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 248 | 73.11 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 255 | 73.12 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 272 | 73.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 298 | 73.24 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 434 | 73.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 639 | 74.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 768 | 74.65 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 794 | 74.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 797 | 74.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 23 |