BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0740300 Os02g0740300|AK067833
(611 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0740300 AAA ATPase domain containing protein 1117 0.0
Os02g0325100 Similar to 26S protease regulatory subunit 6B ... 128 1e-29
Os06g0714500 AAA ATPase domain containing protein 128 1e-29
Os02g0199900 Similar to 26S proteasome regulatory complex s... 126 4e-29
Os06g0607800 Similar to 26S proteasome regulatory complex s... 125 1e-28
Os01g0683100 Similar to Katanin p60 ATPase-containing subun... 124 1e-28
Os03g0298400 Similar to 26S proteasome subunit 4-like prote... 124 2e-28
Os03g0151800 Similar to Cell division control protein 48 ho... 124 2e-28
Os08g0413000 Similar to Valosin-containing protein (Fragment) 123 4e-28
Os07g0672500 SMAD/FHA domain containing protein 123 4e-28
Os07g0691800 Similar to 26S proteasome subunit 4-like prote... 122 7e-28
Os06g0130000 Similar to Tobacco mosaic virus helicase domai... 120 4e-27
AK119311 117 3e-26
AK109969 117 4e-26
Os06g0225900 AAA ATPase domain containing protein 117 4e-26
Os03g0344700 AAA ATPase domain containing protein 114 2e-25
Os01g0673500 Similar to Katanin p60 ATPase-containing subun... 114 2e-25
Os06g0600100 Similar to TAT-binding protein homolog (Fragment) 114 2e-25
Os01g0226400 AAA ATPase domain containing protein 113 4e-25
Os02g0205300 Similar to TAT-binding protein homolog (Fragment) 112 6e-25
Os05g0584600 AAA ATPase domain containing protein 112 1e-24
Os01g0757400 Similar to Katanin p60 ATPase-containing subun... 112 1e-24
Os01g0623500 AAA ATPase domain containing protein 111 1e-24
Os01g0141300 110 3e-24
Os02g0803700 Similar to 26S protease regulatory subunit 6A ... 108 8e-24
Os06g0173100 Similar to 26S protease regulatory subunit 6A ... 108 1e-23
AK110513 107 2e-23
Os06g0192600 26S proteasome regulatory particle triple-A AT... 106 4e-23
Os04g0617600 Similar to Cdc48 cell division control protein... 102 7e-22
Os01g0842600 Similar to AAA-metalloprotease FtsH 102 7e-22
Os01g0574500 Peptidase M41, FtsH domain containing protein 101 2e-21
Os05g0458400 Similar to AAA-metalloprotease FtsH 101 2e-21
Os09g0560200 Similar to 26S protease regulatory subunit 6B ... 100 2e-21
Os02g0784700 Similar to 26S protease regulatory subunit 7 (... 100 2e-21
AK119842 100 3e-21
Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.... 100 3e-21
Os09g0515100 Similar to Cdc48 cell division control protein... 98 2e-20
Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependen... 98 2e-20
Os04g0284600 Similar to TAT-binding protein 1 (Fragment) 97 2e-20
AK110158 96 7e-20
Os02g0649700 Peptidase M41, FtsH extracellular domain conta... 96 7e-20
Os04g0498800 Similar to Cell division control protein 48 ho... 95 1e-19
AK110388 94 3e-19
Os06g0109400 AAA ATPase domain containing protein 93 5e-19
Os02g0706500 CbxX/CfqX family protein 91 3e-18
Os05g0376200 Similar to Cell division control protein 48 ho... 89 7e-18
Os06g0725900 Similar to Cell division protein ftsH homolog,... 87 3e-17
Os11g0661400 AAA ATPase, central region domain containing p... 81 2e-15
Os05g0519400 Similar to N-ethylmaleimide sensitive factor N... 77 4e-14
Os06g0229066 Twin-arginine translocation pathway signal dom... 74 2e-13
Os02g0697600 AAA ATPase domain containing protein 74 3e-13
Os04g0479000 Similar to HPV16 E1 protein binding protein (T... 66 7e-11
>Os02g0740300 AAA ATPase domain containing protein
Length = 611
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/579 (94%), Positives = 547/579 (94%)
Query: 33 LQNRPAAASPSHALGSRLGFLNGVPGAPGAREXXXXXXXXXXXXXXXXXXXXLPVAYADA 92
LQNRPAAASPSHALGSRLGFLNGVPGAPGARE LPVAYADA
Sbjct: 33 LQNRPAAASPSHALGSRLGFLNGVPGAPGAREASAFTTAGFLAAGAAAALASLPVAYADA 92
Query: 93 NEGXXXXXXXXXXXXKPVNPDAAVSSDVAVGEDLAHKERKRIIELIQSRGMPHGSYPQFD 152
NEG KPVNPDAAVSSDVAVGEDLAHKERKRIIELIQSRGMPHGSYPQFD
Sbjct: 93 NEGVVDSAVSSDAAVKPVNPDAAVSSDVAVGEDLAHKERKRIIELIQSRGMPHGSYPQFD 152
Query: 153 VAVKGQKVVVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAWNSVAARQITLN 212
VAVKGQKVVVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAWNSVAARQITLN
Sbjct: 153 VAVKGQKVVVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAWNSVAARQITLN 212
Query: 213 PHKKTTSNGDDNEDDLCVLIFEPLVGSQYSVSSYEVEFIKRGGFSLRELEALTSVLKLVG 272
PHKKTTSNGDDNEDDLCVLIFEPLVGSQYSVSSYEVEFIKRGGFSLRELEALTSVLKLVG
Sbjct: 213 PHKKTTSNGDDNEDDLCVLIFEPLVGSQYSVSSYEVEFIKRGGFSLRELEALTSVLKLVG 272
Query: 273 QKDVKQSSGKGNKSYTTRKGNGQRSKHVPSMEKTISDLEGMGVRVYGFDETSSIPMDGSG 332
QKDVKQSSGKGNKSYTTRKGNGQRSKHVPSMEKTISDLEGMGVRVYGFDETSSIPMDGSG
Sbjct: 273 QKDVKQSSGKGNKSYTTRKGNGQRSKHVPSMEKTISDLEGMGVRVYGFDETSSIPMDGSG 332
Query: 333 TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK 392
TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK
Sbjct: 333 TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK 392
Query: 393 TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFA 452
TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFA
Sbjct: 393 TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFA 452
Query: 453 SARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALISRFDSIICFDLP 512
SARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALISRFDSIICFDLP
Sbjct: 453 SARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALISRFDSIICFDLP 512
Query: 513 DQQTRAEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQAERHWASKLIRGQVPKND 572
DQQTRAEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQAERHWASKLIRGQVPKND
Sbjct: 513 DQQTRAEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQAERHWASKLIRGQVPKND 572
Query: 573 KGEPSLPPVEEYVACSEQRRRSLPNRTSKESRLPALKLA 611
KGEPSLPPVEEYVACSEQRRRSLPNRTSKESRLPALKLA
Sbjct: 573 KGEPSLPPVEEYVACSEQRRRSLPNRTSKESRLPALKLA 611
>Os02g0325100 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7)
Length = 419
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 131/259 (50%), Gaps = 20/259 (7%)
Query: 324 SSIPMDGSG---TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPR 380
SSI + GS V + +I G + QK+EI + + L L E+Y +I + PR
Sbjct: 150 SSISLLGSSEKPNVTYTDIGGCDIQKQEIREAVELPLTHHELYKQIG--------IDPPR 201
Query: 381 AVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDG 440
VL GPPGTGKT A+ +A + V + KY GE R++ VF LA +
Sbjct: 202 GVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE-NAP 260
Query: 441 GIIFLDEVDSFASARDSEMHEATR---RILSVILRQIDGFEQDRRVVVIAATNRKEDLDP 497
IIF+DEVD+ A+AR A R RIL +L Q+DGF+Q V VI ATNR + LDP
Sbjct: 261 AIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDP 320
Query: 498 ALI--SRFDSIICFDLPD-QQTRAEISAQYAKHLTKSE--LFQFSLATEEMSGRDIRDIC 552
AL+ R D I F LPD +Q R AK E L + +++S DI IC
Sbjct: 321 ALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADIAAIC 380
Query: 553 QQAERHWASKLIRGQVPKN 571
Q+A H K +PK+
Sbjct: 381 QEAGMHAVRKNRYVILPKD 399
>Os06g0714500 AAA ATPase domain containing protein
Length = 393
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 139/250 (55%), Gaps = 15/250 (6%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V +++I G + K+ + + ++L L+ PE++ T K + + + VL GPPGTGKT
Sbjct: 81 VEFDSIGGLDHVKQALYELVILPLRRPELF------TFGKLLSPQ-KGVLLYGPPGTGKT 133
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
A+ IAK++G + V + +MSK++G++++L+ +VFSLA+ L IIF+DEVDSF
Sbjct: 134 MLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVSAVFSLAHKL-QPAIIFIDEVDSFLG 192
Query: 454 ARDSEMHEATRRILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALISRFDSIICFDL 511
R + HEA + + + DGF +Q+ RV+V+AATNR +LD A++ RF I +
Sbjct: 193 QRRTTDHEAMTNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILRRFTQIFEIGI 252
Query: 512 PDQQTRAEISAQYAKHLTKSELFQFSLAT---EEMSGRDIRDICQQAERHWASKLIRGQV 568
P Q R++I K + E +G DI ++C+QA + +L+ +
Sbjct: 253 PVQSERSKILRVVLKGENVEPNINYDYIAGLCEGFTGSDILELCKQAAFYPIRELLNNEK 312
Query: 569 P--KNDKGEP 576
K DK P
Sbjct: 313 DGRKADKPRP 322
>Os02g0199900 Similar to 26S proteasome regulatory complex subunit p42D
Length = 400
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 119/232 (51%), Gaps = 17/232 (7%)
Query: 332 GTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTG 391
G V + + G Q RE+ ++I L L +PE++ + P+ VL GPPGTG
Sbjct: 135 GNVSYSAVGGLSDQIRELRESIELPLMNPELF--------LRVGIKPPKGVLLYGPPGTG 186
Query: 392 KTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSF 451
KT AR IA L + I+ KY GES RL+ +F A D IIF+DE+D+
Sbjct: 187 KTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARD-HQPCIIFMDEIDAI 245
Query: 452 ASARDSEMHEATR---RILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSI 506
R SE A R R L +L Q+DGF++ +V +I ATNR + LDPAL+ R D
Sbjct: 246 GGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRK 305
Query: 507 ICFDLPDQQTRAEISAQYAKHLTKSELFQFSLAT---EEMSGRDIRDICQQA 555
I LP++Q R E+ +A + K + E +G D+R++C +A
Sbjct: 306 IEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 357
>Os06g0607800 Similar to 26S proteasome regulatory complex subunit p42D
Length = 401
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 121/232 (52%), Gaps = 17/232 (7%)
Query: 332 GTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTG 391
G V + + G Q RE+ ++I L L +P+++ + P+ VL GPPGTG
Sbjct: 136 GNVSYSAVGGLSDQIRELRESIELPLMNPKLF--------LRVGIKPPKGVLLYGPPGTG 187
Query: 392 KTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSF 451
KT AR IA L + I+ KY GES RL+ +FS A + IIF+DE+D+
Sbjct: 188 KTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFSYARE-HQPCIIFMDEIDAI 246
Query: 452 ASARDSEMHEATR---RILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSI 506
R SE A R R L +L Q+DGF++ +V +I ATNR + LDPAL+ R D
Sbjct: 247 GGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRK 306
Query: 507 ICFDLPDQQTRAEISAQYAKHLTKSELFQFSLAT---EEMSGRDIRDICQQA 555
I LP++Q+R E+ +A + K + E +G D+R++C +A
Sbjct: 307 IEIPLPNEQSRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEA 358
>Os01g0683100 Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3)
(Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
(Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
(AtAAA1)
Length = 519
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 22/253 (8%)
Query: 328 MDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGP 387
+D + V W+++AG KR +E+ ++L L PE + I R + VL GP
Sbjct: 226 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWK---------GVLMFGP 276
Query: 388 PGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDE 447
PGTGKT A+ +A + G V + SK+ GESER++ +F LA IF+DE
Sbjct: 277 PGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLAR-FYAPSTIFIDE 335
Query: 448 VDSFASARD-SEMHEATRRILSVILRQIDGFE--------QDRRVVVIAATNRKEDLDPA 498
+DS ++R S HE++RR+ S +L QIDG Q + V+V+AATN D+D A
Sbjct: 336 IDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEA 395
Query: 499 LISRFDSIICFDLPDQQTRA---EISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQA 555
L R + I LP+ ++R I+ + + T ++ + + TE SG D+ ++C+ A
Sbjct: 396 LRRRLEKRIYIPLPNFESRKALININLKTVEVATDVDIDEVARRTEGYSGDDLTNVCRDA 455
Query: 556 ERHWASKLIRGQV 568
+ + I G+
Sbjct: 456 SMNGMRRKIAGKT 468
>Os03g0298400 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 450
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
+ +I G + Q +EI++ + L L PE+Y++I P+ V+ G PGTGKT
Sbjct: 194 YADIGGLDAQIQEIKEAVELPLTHPELYEDIG--------IRPPKGVILYGEPGTGKTLL 245
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
A+ +A L V ++ KY G+ +L+ +F +A+DL I+F+DE+D+ + R
Sbjct: 246 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDL-SPSIVFIDEIDAVGTKR 304
Query: 456 ---DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIICFD 510
S +R + +L Q+DGF+ V VI ATNR E LDPAL+ R D I F
Sbjct: 305 YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFP 364
Query: 511 LPDQQTRAEISAQYAKHLTKSE---LFQFSLATEEMSGRDIRDICQQA 555
LPD +TR I + +T ++ L +F + +E SG DI+ IC +A
Sbjct: 365 LPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEA 412
>Os03g0151800 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 809
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 23/237 (9%)
Query: 333 TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK 392
V WE+I G E KRE+++T+ ++ PE ++ KF + + VLF GPPG GK
Sbjct: 479 NVSWEDIGGLENVKRELQETVQYPVEHPEKFE--------KFGMSPSKGVLFYGPPGCGK 530
Query: 393 TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFA 452
T A+ IA + + V +++ ++GESE + +F A ++F DE+DS A
Sbjct: 531 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQ-SAPCVLFFDELDSIA 589
Query: 453 SARDSEMHE---ATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSII 507
+ R S + + A R+L+ +L ++DG + V +I ATNR + +DPAL+ R D +I
Sbjct: 590 TQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLI 649
Query: 508 CFDLPDQQTRAEISAQYAKHLTKS------ELFQFSLATEEMSGRDIRDICQQAERH 558
LPD Q+R +I + L KS +L + T+ SG DI +ICQ+A ++
Sbjct: 650 YIPLPDDQSRLQI---FKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKY 703
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 16/228 (7%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V ++++ G Q +I + + L L+ P+++ I P+ +L GPPG+GKT
Sbjct: 207 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG--------VKPPKGILLYGPPGSGKT 258
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLA-NDLPDGGIIFLDEVDSFA 452
AR +A + G + IMSK GESE L F A + P IIF+DE+DS A
Sbjct: 259 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP--SIIFIDEIDSIA 316
Query: 453 SARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPAL--ISRFDSIICFD 510
R+ E RRI+S +L +DG + V+V+ ATNR +DPAL RFD I
Sbjct: 317 PKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIG 376
Query: 511 LPDQQTRAEISAQYAKHLTKSE---LFQFSLATEEMSGRDIRDICQQA 555
+PD+ R E+ + K++ +E L + T G D+ +C +A
Sbjct: 377 VPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEA 424
>Os08g0413000 Similar to Valosin-containing protein (Fragment)
Length = 848
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 128/233 (54%), Gaps = 23/233 (9%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V W++I G KRE+++T+ ++ PE++D F + R VLF GPPG GKT
Sbjct: 486 VSWDDIGGLGEVKRELQETVQYPVEHPEMFD--------LFGMSPSRGVLFYGPPGCGKT 537
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
A+ IAK+ + + +++ ++GESE + ++F A I+F DE+DS A
Sbjct: 538 MMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDKARQ-SAPCILFFDELDSIAV 596
Query: 454 ARDSEMHEA---TRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIIC 508
R + + +A R+L+ +L ++DG + V VI ATNR + +DPA++ R D +I
Sbjct: 597 KRGNSVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPDIIDPAMLRPGRLDQLIY 656
Query: 509 FDLPDQQTRAEI------SAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQA 555
LPD +R EI A ++H+ +L + +T+ SG DI++ICQ+A
Sbjct: 657 IPLPDASSRLEIFRANLRKAPMSRHV---DLPAMAASTDGFSGADIKEICQRA 706
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 328 MDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGP 387
+DG G ++++ G Q +I + + L L+ P+++ + P+ +L GP
Sbjct: 209 LDGPG---YDDVGGVRKQLAQIRELVELPLRHPKLFQTLG--------VRPPKGILLYGP 257
Query: 388 PGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESE-RLLGSVFSLANDLPDGGIIFLD 446
PGTGKT AR IA ++G + V IMS GESE L P I+F+D
Sbjct: 258 PGTGKTLLARAIAAESGAHFVVVNGPEIMSGMPGESEANLRAVFAEADAAAP--SIVFMD 315
Query: 447 EVDSFASARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPAL--ISRFD 504
E+DS A +R+ E RR++S +L +DG +V+VI ATNR LDPAL RFD
Sbjct: 316 EIDSIAPSREKAHGEVERRVVSQLLTLMDGLRPRAQVIVIGATNRPNSLDPALRRFGRFD 375
Query: 505 SIICFDLPDQQTRAEISAQYAKHLTKS---ELFQFSLATEEMSGRDIRDICQQA 555
+ +PD+ R EI + K++ S +L + T G D+ +C +A
Sbjct: 376 RELDIGVPDELGRLEILRIHTKNMPLSDDVDLERVGKDTHGFVGSDLASLCSEA 429
>Os07g0672500 SMAD/FHA domain containing protein
Length = 1081
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 130/236 (55%), Gaps = 15/236 (6%)
Query: 326 IPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFE 385
IP D G V +E+I E K +++ ++L LQ PE++ + CK +L
Sbjct: 769 IPPDEIG-VTFEDIGALENVKETLKELVMLPLQRPELFSKGQLMKPCK-------GILLF 820
Query: 386 GPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFL 445
GPPGTGKT A+ +A +AG + + + I SK++GE E+ + +VFSLA+ + +IF+
Sbjct: 821 GPPGTGKTMLAKAVATEAGANFINISMSSIASKWFGEGEKYVKAVFSLASKIAP-SVIFV 879
Query: 446 DEVDSFASARDSE-MHEATRRILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALISR 502
DEVD R++ HEA R++ + + DG + RV+V+AATNR DLD A++ R
Sbjct: 880 DEVDGMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRR 939
Query: 503 FDSIICFDLPDQQTRAEI-SAQYAKHLTKSELFQFSLA--TEEMSGRDIRDICQQA 555
+ +LPD R +I S AK ++ +LA T+ SG D++++C A
Sbjct: 940 LPRRLMVNLPDASNRKKILSVILAKEDLADDVDLEALANLTDGYSGSDMKNLCVTA 995
>Os07g0691800 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 448
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
+ +I G + Q +EI++ + L L PE+Y++I P+ V+ G PGTGKT
Sbjct: 192 YADIGGLDAQIQEIKEAVELPLTHPELYEDIG--------IRPPKGVILYGEPGTGKTLL 243
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
A+ +A L V ++ KY G+ +L+ +F +A++L I+F+DE+D+ + R
Sbjct: 244 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADEL-SPSIVFIDEIDAVGTKR 302
Query: 456 ---DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIICFD 510
S +R + +L Q+DGF+ V VI ATNR E LDPAL+ R D I F
Sbjct: 303 YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFP 362
Query: 511 LPDQQTRAEISAQYAKHLTKSE---LFQFSLATEEMSGRDIRDICQQA 555
LPD +TR I + +T ++ L +F + +E SG DI+ IC +A
Sbjct: 363 LPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEA 410
>Os06g0130000 Similar to Tobacco mosaic virus helicase domain-binding protein
(Fragment)
Length = 487
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 272 GQKDVKQSSGKGNKSYTTRKGNGQRSKHVPSMEKTISDLEGMGVRVYGFDETSSIPMDGS 331
GQ Q S G R G K V + TI +D S
Sbjct: 170 GQASSHQKSSSGGAKPVQRAGANYDDKLVEMINTTI--------------------VDRS 209
Query: 332 GTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTG 391
V WE++AG + K+ + + ++L + +++ + R R +L GPPG G
Sbjct: 210 PAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPAR---------GLLLFGPPGNG 260
Query: 392 KTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSF 451
KT A+ +A ++ V + SK+ GE+E+L+ ++F +A D +IF+DE+DS
Sbjct: 261 KTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDR-QPSVIFMDEIDSV 319
Query: 452 ASARDSEMHEATRRILSVILRQIDGFEQ--DRRVVVIAATNRKEDLDPALISRFDSIICF 509
SAR + ++A+RR+ S L Q DG D V+VI ATN+ ++LD A++ R I
Sbjct: 320 MSARLANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYV 379
Query: 510 DLPDQQTR-----AEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQA 555
LPD R ++ Q K L+ +L + + TE SG D+R +C++A
Sbjct: 380 PLPDPNVRRLLLKTQLKGQSFK-LSSHDLERLAADTEGYSGSDLRALCEEA 429
>AK119311
Length = 805
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 115/227 (50%), Gaps = 14/227 (6%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V +++I G Q +I++ + L L+ P ++ I PR +L GPPGTGKT
Sbjct: 199 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIG--------VKPPRGILLYGPPGTGKT 250
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
AR +A + G + IMSK GESE L F A D IIF+DE+D+ A
Sbjct: 251 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA-DKNSPSIIFIDELDAIAP 309
Query: 454 ARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPAL--ISRFDSIICFDL 511
R+ E RRI+S +L +DG +Q V+V+AATNR +D AL RFD I +
Sbjct: 310 KREKTHGEVERRIVSQLLTLMDGLKQSSHVIVMAATNRPNSIDGALRRFGRFDREIDIGI 369
Query: 512 PDQQTRAEISAQYAKHLTKS---ELFQFSLATEEMSGRDIRDICQQA 555
PD R EI + K++ + +L Q + T G D+ +C ++
Sbjct: 370 PDATGRLEILRIHTKNMKLADDVDLEQIAAETHGHVGADLASLCSES 416
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 119/231 (51%), Gaps = 23/231 (9%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
W ++ G E KRE+++ + ++ P+ + KF R VLF GPPG GK
Sbjct: 474 WADVGGLENVKRELQELVQYPVEHPDKF--------LKFGMQPSRGVLFYGPPGCGKMLL 525
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
A+ IA + + V +++ ++GESE + VF A ++F DE+DS A +R
Sbjct: 526 AKAIANECQANFISVKGPELLTMWFGESEANVRDVFDKARSAA-PCVLFFDELDSIAKSR 584
Query: 456 DSEMHE---ATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIICFD 510
+ + A R+++ IL ++DG + V +I ATNR + +DPA++ R D +I
Sbjct: 585 GGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 644
Query: 511 LPDQQTRAEISAQYAKHLTKS------ELFQFSLATEEMSGRDIRDICQQA 555
LPD+++R I + ++ KS +L + T SG D+ ++CQ+A
Sbjct: 645 LPDEKSREAI---FRANMRKSPVADDVDLAYIAKVTHGFSGADLTEVCQRA 692
>AK109969
Length = 882
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 14/227 (6%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V +++I G Q +I + + L L+ P+++ I PR VL GPPGTGKT
Sbjct: 258 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIG--------IKPPRGVLMYGPPGTGKT 309
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
AR +A + + IMSK GESE L F A + II++DE+DS A
Sbjct: 310 LMARAVANETRAFFFLINGPEIMSKMAGESESNLRKAFEEA-EKNSPAIIYIDEIDSIAP 368
Query: 454 ARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPAL--ISRFDSIICFDL 511
R+ E RR++S +L +DG + +VV+AATNR +DPAL RFD + +
Sbjct: 369 KREKTNGEVERRVVSQLLTLMDGLKARSNIVVMAATNRPNSIDPALRRFGRFDREVDIAI 428
Query: 512 PDQQTRAEISAQYAKHLTKSE---LFQFSLATEEMSGRDIRDICQQA 555
PD R EI + K++ +E L Q + T G D+ +C +A
Sbjct: 429 PDPTGRLEILRIHTKNMKLAEDVDLEQIAAETHGYVGSDVAALCSEA 475
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 17/233 (7%)
Query: 333 TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK 392
T W +I G E K+E+++T+ ++ PE + K+ + VLF GPPGTGK
Sbjct: 530 TTTWNDIGGLEKVKQELQETVSYPVEHPEKF--------LKYGMAPSKGVLFYGPPGTGK 581
Query: 393 TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFA 452
T A+ IA + + + +++ ++GESE + VF A ++F DE+D+ A
Sbjct: 582 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAP-CVMFFDELDAIA 640
Query: 453 SAR---DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSII 507
AR + A R+++ IL ++DG + V +I ATNR + +DPA++ R D +I
Sbjct: 641 KARGSSSGDSGGAGDRVINQILTEMDGVSSRKNVFIIGATNRPDQIDPAILRPGRLDQLI 700
Query: 508 CFDLPDQQTRAEI-SAQYAKHLTKSELFQFSLA--TEEMSGRDIRDICQQAER 557
LPD+ +R I A K +++ LA T SG D+ +ICQ+A +
Sbjct: 701 YIPLPDEPSRLSILKATLKKSPIAADVDLTFLAKHTHGFSGADLAEICQRAAK 753
>Os06g0225900 AAA ATPase domain containing protein
Length = 271
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 117/206 (56%), Gaps = 16/206 (7%)
Query: 357 LQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIM 416
++ PE++ CK +L GPPGTGKT A+ +A +AG + + +
Sbjct: 1 MRRPELFSHGNLLRPCK-------GILLFGPPGTGKTLLAKALATEAGANFISITGSNLT 53
Query: 417 SKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASARDSEM-HEATRRILSVILRQID 475
SK++G++E+L ++FS A+ L IIF+DEVDS AR HEATRR+ + + D
Sbjct: 54 SKWFGDAEKLTKALFSFASRLAP-VIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWD 112
Query: 476 GF--EQDRRVVVIAATNRKEDLDPALISRFDSIICFDLPDQQTRAEI-SAQYAKHLTKSE 532
G ++++R++++ ATNR DLD A+I R I DLPD Q R +I AK +S+
Sbjct: 113 GLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDSQNRMKILKILLAKENLESD 172
Query: 533 LFQF---SLATEEMSGRDIRDICQQA 555
F+F + ATE SG D++++C A
Sbjct: 173 -FRFDELANATEGYSGSDLKNLCIAA 197
>Os03g0344700 AAA ATPase domain containing protein
Length = 666
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 326 IPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFE 385
IP D G V +E+I E K +++ ++L LQ PE++ CK +L
Sbjct: 354 IPPDEIG-VTFEDIGALESVKETLKELVMLPLQRPELFSRGQLMKPCK-------GILLF 405
Query: 386 GPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFL 445
GPPGTGKT A+ +A +AG + + + I SK++GE E+ + +VFSLA+ + +IF+
Sbjct: 406 GPPGTGKTMLAKAVATEAGANFINISMSSISSKWFGEGEKFVKAVFSLASKIAP-SVIFV 464
Query: 446 DEVDSFASARDSE-MHEATRRILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALISR 502
DEVD R++ HEA R++ + + DG + RV+V+AATNR DLD A++ R
Sbjct: 465 DEVDGMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRR 524
Query: 503 FDSIICFDLPDQQTRAEI-SAQYAKHLTKSELFQFSLA--TEEMSGRDIRDICQQA 555
+ +LPD R +I S AK ++ ++A TE SG D++++C A
Sbjct: 525 LPRRLMVNLPDASNRRKILSVILAKEDLADDVDLEAVASLTEGYSGSDLKNLCITA 580
>Os01g0673500 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 370
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 16/232 (6%)
Query: 330 GSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPG 389
GS V WE+I G E KR +++ +++ ++ P+ + + + +L GPPG
Sbjct: 83 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGLLSPWK---------GILLFGPPG 133
Query: 390 TGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVD 449
TGKT A+ +A + + I+SK+ G+SE+L+ +F LA IFLDE+D
Sbjct: 134 TGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARH-HAPSTIFLDEID 192
Query: 450 SFASARDSEM--HEATRRILSVILRQIDGFEQ-DRRVVVIAATNRKEDLDPALISRFDSI 506
+ S R HEA+RR+ + +L Q+DG + D V V+AATN +LD A++ R +
Sbjct: 193 AIISQRGEARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLRRLEKR 252
Query: 507 ICFDLPDQQTRAEISAQYAKHLTKSELFQFSL---ATEEMSGRDIRDICQQA 555
I LP+Q+ R + + + + + + TE SG DIR +C++A
Sbjct: 253 ILVPLPEQEARHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEA 304
>Os06g0600100 Similar to TAT-binding protein homolog (Fragment)
Length = 423
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 26/233 (11%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
++ I G + Q +EI++ I L ++ PE+++ + A +P+ VL GPPGTGKT
Sbjct: 164 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIA--------QPKGVLLYGPPGTGKTLL 215
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
AR +A + V ++ KY GE R++ +F +A + IIF+DE+DS SAR
Sbjct: 216 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP-SIIFMDEIDSIGSAR 274
Query: 456 --------DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDS 505
DSE+ +R + +L Q+DGFE ++ V+ ATNR + LD AL+ R D
Sbjct: 275 MQSGSGGGDSEV----QRTMLELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDR 330
Query: 506 IICFDLPDQQTRAEISAQYAKHLTKSELFQFSLATEEM---SGRDIRDICQQA 555
I F P++ +R +I +++ + E+M SG +++ +C +A
Sbjct: 331 KIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 383
>Os01g0226400 AAA ATPase domain containing protein
Length = 840
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 133/247 (53%), Gaps = 18/247 (7%)
Query: 326 IPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRP-RAVLF 384
IP + G V +++I K +++ ++L L+ P+++ K +P R +L
Sbjct: 522 IPANEIG-VTFDDIGALSDIKESLQELVMLPLRRPDLF---------KGGLLKPCRGILL 571
Query: 385 EGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIF 444
GPPGTGKT A+ IA +A + V + I SK++GE E+ + ++F+LA + IIF
Sbjct: 572 FGPPGTGKTMLAKAIANEAQASFINVSMSTITSKWFGEDEKNVRALFTLAAKV-SPTIIF 630
Query: 445 LDEVDSFASARD-SEMHEATRRILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALIS 501
+DEVDS R+ + HEA R+I + + DG D++++V+AATNR DLD A+I
Sbjct: 631 VDEVDSMLGQRNRAGEHEAMRKIKNEFMTHWDGLLSRPDQKILVLAATNRPFDLDEAIIR 690
Query: 502 RFDSIICFDLPDQQTRAEI-SAQYAKHLTKSELFQFSLA--TEEMSGRDIRDICQQAERH 558
RF+ I LP ++R I + +K L LA TE SG D++++C A
Sbjct: 691 RFERRIMVGLPSLESRELILRSLLSKEKVDGGLDYKELATMTEGYSGSDLKNLCTTAAYR 750
Query: 559 WASKLIR 565
+LI+
Sbjct: 751 PVRELIQ 757
>Os02g0205300 Similar to TAT-binding protein homolog (Fragment)
Length = 424
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 26/233 (11%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
++ I G + Q +EI++ I L ++ PE+++ + A +P+ VL GPPGTGKT
Sbjct: 165 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIA--------QPKGVLLYGPPGTGKTLL 216
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
AR +A + V ++ KY GE R++ +F +A + IIF+DE+DS SAR
Sbjct: 217 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP-SIIFMDEIDSIGSAR 275
Query: 456 --------DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDS 505
DSE+ +R + +L Q+DGFE ++ V+ ATNR + LD AL+ R D
Sbjct: 276 MESGTGNGDSEV----QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 331
Query: 506 IICFDLPDQQTRAEISAQYAKHLTKSELFQFSLATEEM---SGRDIRDICQQA 555
I F P++ +R +I +++ + E+M SG +++ +C +A
Sbjct: 332 KIEFPNPNEDSRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 384
>Os05g0584600 AAA ATPase domain containing protein
Length = 855
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 124/233 (53%), Gaps = 25/233 (10%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRP-RAVLFEGPPGTGK 392
V +++I K +++ ++L L+ P+++ K +P R +L GPPGTGK
Sbjct: 498 VTFDDIGALADIKESLQELVMLPLRRPDLF---------KGGLLKPCRGILLFGPPGTGK 548
Query: 393 TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFA 452
T A+ IA AG + V + I SK++GE E+ + ++FSLA + IIF+DEVDS
Sbjct: 549 TMLAKAIANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAP-TIIFVDEVDSML 607
Query: 453 S--ARDSEMHEATRRILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALISRFDSIIC 508
AR E HEA R+I + + DG + R++V+AATNR DLD A+I RF+ I
Sbjct: 608 GQRARCGE-HEAMRKIKNEFMSHWDGLLSKSGERILVLAATNRPFDLDEAIIRRFERRIM 666
Query: 509 FDLPDQQTRAEI------SAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQA 555
LP +R I + A+ + EL + TE SG D++++C A
Sbjct: 667 VGLPTLDSRELILRTLLSKEKVAEDIDYKEL---ATMTEGYSGSDLKNLCVTA 716
>Os01g0757400 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 386
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 125/233 (53%), Gaps = 18/233 (7%)
Query: 330 GSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPG 389
GS V WE+I G E KR +++ +++ ++ P+ + + + +L GPPG
Sbjct: 95 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWK---------GILLFGPPG 145
Query: 390 TGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLA-NDLPDGGIIFLDEV 448
TGKT A+ +A + + I+SK+ G+SE+L+ +F LA + P IFLDE+
Sbjct: 146 TGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAP--STIFLDEI 203
Query: 449 DSFASARDSEM--HEATRRILSVILRQIDGFEQDRRVV-VIAATNRKEDLDPALISRFDS 505
D+ S R HEA+RR+ + +L Q+DG + +V V+AATN +LD A++ R +
Sbjct: 204 DAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEK 263
Query: 506 IICFDLPDQQTRAEISAQYAKHLT-KSELFQFSLA--TEEMSGRDIRDICQQA 555
I LP+ + R + + T K E+ +L TE SG DIR +C++A
Sbjct: 264 RILVPLPEAEARHAMFEELLPSTTSKLEVPYDTLVEKTEGYSGSDIRLVCKEA 316
>Os01g0623500 AAA ATPase domain containing protein
Length = 812
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 21/256 (8%)
Query: 326 IPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFE 385
IP + G V +++I K + + ++L LQ P+ + CK VL
Sbjct: 459 IPANEIG-VTFDDIGALADIKECLHELVMLPLQRPDFFKG-GLLKPCK-------GVLLF 509
Query: 386 GPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFL 445
GPPGTGKT A+ +A AG L + + + SK+YGESE+ + ++FSLA L IIF+
Sbjct: 510 GPPGTGKTMLAKALANAAGASFLNISMASMTSKWYGESEKCIQALFSLAAKLAP-AIIFI 568
Query: 446 DEVDSFASARDSEM-HEATRRILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALISR 502
DEVDS RD+ +EA+RR+ + + DG + + R++V+AATNR DLD A+I R
Sbjct: 569 DEVDSMLGKRDNHSENEASRRVKNEFMAHWDGLLSKSNERILVLAATNRPFDLDDAVIRR 628
Query: 503 FDSIICFDLPDQQTRAEI-----SAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQAER 557
F+ I LP ++R I S + +++ EL + TE + D+++IC A
Sbjct: 629 FEHRIMVGLPTLESRELILKTLLSKETVENIDFKELAKM---TEGYTSSDLKNICVTAAY 685
Query: 558 HWASKLIRGQVPKNDK 573
H +L++ + K K
Sbjct: 686 HPVRELLQKEKNKVKK 701
>Os01g0141300
Length = 448
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 19/227 (8%)
Query: 333 TVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGK 392
+V W ++AG E K +++ +L ++ P + R + +A L GPPGTGK
Sbjct: 105 SVKWSDVAGLESAKEALQEAAILPIKFPHFF----TGKRSPW-----KAFLLYGPPGTGK 155
Query: 393 TSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLA-NDLPDGGIIFLDEVDSF 451
+ A +A + + ++SK+ GESE+L+ ++F +A + P IIF+DE+DS
Sbjct: 156 SYLAEAVATEVDSTFFSISSSDLVSKWMGESEKLVANLFQMARENAP--SIIFIDEIDSL 213
Query: 452 ASAR-DSEMHEATRRILSVILRQIDGFEQ-DRRVVVIAATNRKEDLDPALISRFDSIICF 509
R + +EA+RRI + +L Q+ GF+ + +V+V+AATN LD A+ RFD I
Sbjct: 214 CGQRGECNENEASRRIKTELLVQMQGFDNSNDKVLVLAATNMPHVLDQAMRRRFDKCIYI 273
Query: 510 DLPDQQTRAE---ISAQYAKH-LTKSELFQFSLATEEMSGRDIRDIC 552
LPD + R + I H LT+ + + TE SG DI +C
Sbjct: 274 PLPDLKARKDTFKIHIGDTPHSLTEGDFVSLAYQTEGFSGSDIA-VC 319
>Os02g0803700 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1)
Length = 429
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 19/240 (7%)
Query: 325 SIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLF 384
++ +D T + +I G E Q +E+ + I+L + + + K P+ VL
Sbjct: 164 AMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQ--------KLGIRPPKGVLL 215
Query: 385 EGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIF 444
GPPGTGKT AR A Q L + ++ + G+ +L+ F LA + IIF
Sbjct: 216 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKE-KSPCIIF 274
Query: 445 LDEVDSFASAR-DSEM---HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI 500
+DE+D+ + R DSE+ E R +L +L Q+DGF D R+ VIAATNR + LDPAL+
Sbjct: 275 IDEIDAIGTKRFDSEVSGDREVQRTMLE-LLNQLDGFSSDERIKVIAATNRADILDPALM 333
Query: 501 --SRFDSIICFDLPDQQTRAEISAQYAKHLTKSELFQF---SLATEEMSGRDIRDICQQA 555
R D I F P ++ RA I +++ + + F + +T++ +G ++ +C +A
Sbjct: 334 RSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEA 393
>Os06g0173100 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
(LEMA-1)
Length = 429
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 19/240 (7%)
Query: 325 SIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLF 384
++ +D T + +I G E Q +E+ + I+L + + + K P+ VL
Sbjct: 164 AMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQ--------KLGIRPPKGVLL 215
Query: 385 EGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIF 444
GPPGTGKT AR A Q L + ++ + G+ +L+ F LA + IIF
Sbjct: 216 YGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKA-PCIIF 274
Query: 445 LDEVDSFASAR-DSEM---HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI 500
+DE+D+ + R DSE+ E R +L +L Q+DGF D R+ VIAATNR + LDPAL+
Sbjct: 275 IDEIDAIGTKRFDSEVSGDREVQRTMLE-LLNQLDGFSSDERIKVIAATNRADILDPALM 333
Query: 501 --SRFDSIICFDLPDQQTRAEISAQYAKHLTKSELFQF---SLATEEMSGRDIRDICQQA 555
R D I F P ++ RA I +++ + + F + +T++ +G ++ +C +A
Sbjct: 334 RSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEA 393
>AK110513
Length = 885
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 118/247 (47%), Gaps = 27/247 (10%)
Query: 323 TSSIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAV 382
+S+ + V + ++AG + K+EI + + L+ PE Y E+ P+
Sbjct: 358 VTSVDKNAKDKVTFNDVAGCDEAKQEIMEFVDF-LKKPEKYKELGAKI--------PKGA 408
Query: 383 LFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGI 442
L GPPGTGKT A+ A +AGVP L + M + G + +FS A I
Sbjct: 409 LLVGPPGTGKTLLAKATAGEAGVPFLSISGSDFMEMFVGVGPARVRDLFSQARSQAP-SI 467
Query: 443 IFLDEVDSFASARD----SEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPA 498
IF+DE+D+ AR + H+ L+ +L ++DGF VVV+A TNR + LD A
Sbjct: 468 IFIDEIDAIGRARGRGAMAGGHDERENTLNQLLVEMDGFNTTSGVVVLAGTNRPDILDKA 527
Query: 499 LI--SRFDSIICFDLPDQQTRAEISAQYAKHLTKSELFQ--------FSLATEEMSGRDI 548
L+ RFD I D PD + R +I + HL K L + + T SG DI
Sbjct: 528 LMRPGRFDRTISVDTPDIKGREQI---FRVHLAKLRLEKALEHYSERLAALTPGFSGADI 584
Query: 549 RDICQQA 555
++C +A
Sbjct: 585 ANVCNEA 591
>Os06g0192600 26S proteasome regulatory particle triple-A ATPase subunit1 (26S
protease regulatory subunit 7)
Length = 426
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V + ++ G + Q ++ + + L + PE + K + P+ VL GPPGTGKT
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKF--------VKLGIDPPKGVLCYGPPGTGKT 216
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
AR +A + + V ++ KY GE R++ +F +A I+F DEVD+
Sbjct: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARS-KKACIVFFDEVDAIGG 275
Query: 454 ARDSEM----HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSII 507
AR + +E R +L ++ Q+DGF+ + V+ ATNR + LDPAL+ R D +
Sbjct: 276 ARFDDGVGGDNEVQRTMLEIV-NQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
Query: 508 CFDLPDQQTRAEISAQYAKHLTKSELFQFSLATE---EMSGRDIRDICQQA 555
F LPD + R +I + + + +F L +G DIR +C +A
Sbjct: 335 EFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385
>Os04g0617600 Similar to Cdc48 cell division control protein 48, AAA family
Length = 940
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 152/330 (46%), Gaps = 30/330 (9%)
Query: 251 IKRGGFSLRELEALTSV--LKLVGQKDVKQSSGKGNK---SYTTRKGNGQRSKHVPSMEK 305
++ GF R++ AL + + + + +++ +G+K T + Q + E
Sbjct: 571 VQTSGFMPRDILALVADAGISFAHKVETDKNNSEGDKLKGILPTSSSSSQNEEKTFCKEY 630
Query: 306 TISDLEGMGVRVYGFDETSSIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDE 365
+S LE R T +P V WE++ G E K+ I DTI Q P +Y
Sbjct: 631 ILSSLERAKKRNRAALGTPKVP-----NVKWEDVGGLEEVKKVILDTI----QLPLLYKH 681
Query: 366 IARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESER 425
+ + + + VL GPPGTGKT A+ +A + + L V +++ Y GESE+
Sbjct: 682 LFSS-----KLGKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYVGESEK 736
Query: 426 LLGSVFSLANDLPDGGIIFLDEVDSFASARDSEMHEA--TRRILSVILRQIDGFEQDRR- 482
+ +F A +IF DE+DS A AR S A R++S +L +IDG + +
Sbjct: 737 NVRDIFEKARS-ARPCVIFFDELDSLAPARGSSSDSAGVMDRVVSQLLVEIDGLSDNSQD 795
Query: 483 VVVIAATNRKEDLDPALI--SRFDSIICFDLPDQQTRAE--ISAQYAKHLTKSELFQFSL 538
+ +I ATNR + LD AL+ RFD ++ + + E + AQ K+ + S+
Sbjct: 796 LFIIGATNRPDLLDSALLRPGRFDKLLYVGVNSDASYRERILKAQTRKYKLHENVSLLSI 855
Query: 539 ATE---EMSGRDIRDICQQAERHWASKLIR 565
A + +G DI +C A H A L +
Sbjct: 856 AQQCPPNFTGADIYALCADAWYHAAKNLAK 885
>Os01g0842600 Similar to AAA-metalloprotease FtsH
Length = 802
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 322 ETSSIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRA 381
+ + + + V ++++AG + K+EI + + L++P+ Y+E+ P+
Sbjct: 305 QVTKLDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKI--------PKG 355
Query: 382 VLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGG 441
L GPPGTGKT A+ A ++GVP L + M + G + ++F A
Sbjct: 356 ALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSP-S 414
Query: 442 IIFLDEVDSFASARD----SEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDP 497
I+F+DE+D+ AR S H+ L+ +L ++DGF VVV+A TNR + LD
Sbjct: 415 IVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDK 474
Query: 498 ALI--SRFDSIICFDLPDQQTRAEISAQYAKHL---TKSELFQFSLA--TEEMSGRDIRD 550
AL+ RFD I D PD + R +I Y K L + + LA T +G DI +
Sbjct: 475 ALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIAN 534
Query: 551 ICQQA 555
+C +A
Sbjct: 535 VCNEA 539
>Os01g0574500 Peptidase M41, FtsH domain containing protein
Length = 715
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 15/225 (6%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
+ ++ G + K E+E+ I+ L+ P+ R TR + P+ VL GPPGTGKT
Sbjct: 229 FSDVKGVDEAKAELEE-IVHYLRDPK------RFTRLGGKL--PKGVLLVGPPGTGKTML 279
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
AR IA +AGVP + G R + +F+ A IIF+DE+D+ +R
Sbjct: 280 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPC-IIFMDEIDAIGGSR 338
Query: 456 DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIICFDLPD 513
+ + + + L+ +L ++DGF+Q+ ++VIAATN E LD AL+ RFD I PD
Sbjct: 339 NPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPD 398
Query: 514 QQTRAEISAQYAKHLTKS---ELFQFSLATEEMSGRDIRDICQQA 555
+ R +I + + KS +L + T SG D+ ++ A
Sbjct: 399 VEGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVA 443
>Os05g0458400 Similar to AAA-metalloprotease FtsH
Length = 822
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 21/245 (8%)
Query: 322 ETSSIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRA 381
+ + + + V ++++AG + K+EI + + L++P+ Y+E+ P+
Sbjct: 320 QVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKI--------PKG 370
Query: 382 VLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGG 441
L GPPGTGKT A+ A ++GVP L + M + G + ++F A
Sbjct: 371 ALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAP-S 429
Query: 442 IIFLDEVDSFASARD----SEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDP 497
IIF+DE+D+ AR S ++ L+ +L ++DGF VVV+A TNR + LD
Sbjct: 430 IIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDK 489
Query: 498 ALI--SRFDSIICFDLPDQQTRAEISAQYAKHL---TKSELFQFSLA--TEEMSGRDIRD 550
AL+ RFD I D PD + R +I Y K L + + LA T +G DI +
Sbjct: 490 ALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIAN 549
Query: 551 ICQQA 555
+C +A
Sbjct: 550 VCNEA 554
>Os09g0560200 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7).
Splice isoform 2
Length = 448
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 25/251 (9%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V +++I G E QKRE+ + + L L PE++ + PR VL GP GTGKT
Sbjct: 187 VAYDDIGGCEAQKREVREAVELPLTHPELFAAAG--------VDPPRGVLLHGPLGTGKT 238
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
A+ +A++ V ++++ G R++ +F LA D+ I+F+DEVD+ A+
Sbjct: 239 MLAKAVARETSAAFFRVN-AAELARHDGP--RVVRDLFRLARDMA-PAIVFIDEVDAIAA 294
Query: 454 ARDSEM------HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDS 505
AR +R+L +L Q+DGF++ V VI ATNR +DLDPAL+ R D
Sbjct: 295 ARQGGDDDDGGARRHVQRVLIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGRLDR 354
Query: 506 IICFDLPD--QQTRAEISAQYAKHLTKSELFQFSLAT--EEMSGRDIRDICQQAERHWAS 561
+ F P+ ++ R + A ++ +LA +++S +I +C++A A
Sbjct: 355 KVEFTAPESPEEKRLVLQTCTAGMSLDGDVDLDALAARRDKLSAAEIAAVCRKAG-MQAV 413
Query: 562 KLIRGQVPKND 572
+ RG V +D
Sbjct: 414 RDRRGAVTADD 424
>Os02g0784700 Similar to 26S protease regulatory subunit 7 (26S proteasome
subunit 7) (26S proteasome AAA-ATPase subunit RPT1)
(Regulatory particle triple-A ATPase subunit 1)
Length = 235
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 373 KFETNRPRAVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFS 432
K + P+ VL GPPGTGKT AR +A + + V ++ KY GE R++ +F
Sbjct: 5 KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQ 64
Query: 433 LANDLPDGGIIFLDEVDSFASARDSEM----HEATRRILSVILRQIDGFEQDRRVVVIAA 488
+A I+F DEVD+ AR + +E R +L ++ Q+DGF+ + V+ A
Sbjct: 65 MARS-KKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIV-NQLDGFDARGNIKVLMA 122
Query: 489 TNRKEDLDPALI--SRFDSIICFDLPDQQTRAEISAQYAKHLTKSELFQFSLATE---EM 543
TNR + LDPAL+ R D + F LPD + R +I + + + +F L
Sbjct: 123 TNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNS 182
Query: 544 SGRDIRDICQQAERHWASKLIRGQVPKND 572
+G DIR +C +A +A + R V + D
Sbjct: 183 TGADIRSVCTEAG-MYAIRARRKTVTEKD 210
>AK119842
Length = 769
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 305 KTISDLEGMGVRVYG-------FDETSSIPMD-GSGTVM----------WENIAGYEPQK 346
K + L G G+ Y F ETS + G+GT + ++ G + K
Sbjct: 241 KWVRWLAGFGLACYVALVLITLFVETSGVLKKVGAGTTAEVRAEHQNTRFTDVHGCDEAK 300
Query: 347 REIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAKQAGVP 406
E D + L+ PE Y+ K P+ VL GPPGTGKT AR +A +AGVP
Sbjct: 301 EEPLDVVDF-LKHPERYN--------KLGGRLPKGVLLIGPPGTGKTLLARAVAGEAGVP 351
Query: 407 LLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASARDSEMHEATRRI 466
YV Y G + + +F+ A I+F+DE+D+ R S R+
Sbjct: 352 FFYVSGSEFDEVYVGVGAKRVRELFTAAR-AKSPAIVFIDELDAVGGKRVSRDANYHRQT 410
Query: 467 LSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIICFDLPDQQTRAEISAQY 524
L+ +L +DGF+Q V+ IAATN E LD AL RFD + +LPD R I +
Sbjct: 411 LNQLLNDLDGFDQSTGVIFIAATNHPELLDSALTRPGRFDRHVQVELPDVSGRLAILKYH 470
Query: 525 AKHLTKS---ELFQFSLATEEMSGRDIRDICQQAERHWASKL 563
K + + +L + T SG ++ ++ A ASKL
Sbjct: 471 TKKIRLNPEIDLSTIARGTPGFSGAELENLANSAAIR-ASKL 511
>Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.24.-)
Length = 709
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 15/225 (6%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
+ ++ G + K E+E+ I+ L+ P+ + + P+ VL GPPGTGKT
Sbjct: 222 FSDVKGVDEAKAELEE-IVHYLRDPKRFTHLG--------GKLPKGVLLVGPPGTGKTML 272
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
AR +A +AGVP + G R + +F+ A IIF+DE+D+ +R
Sbjct: 273 ARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPC-IIFMDEIDAIGGSR 331
Query: 456 DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIICFDLPD 513
+ + + R L+ +L ++DGF+Q+ ++VIAATN + LD AL+ RFD I PD
Sbjct: 332 NPKDQQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPD 391
Query: 514 QQTRAEISAQYAKHLTKS---ELFQFSLATEEMSGRDIRDICQQA 555
+ R +I + + KS +L + T SG D+ ++ A
Sbjct: 392 VEGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVA 436
>Os09g0515100 Similar to Cdc48 cell division control protein 48, AAA family
Length = 1198
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 20/240 (8%)
Query: 327 PMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEG 386
P+ G+V + +I G +++ + L P+ + + PR VL G
Sbjct: 354 PLQVDGSVSFNDIGGLSDYIDALKEMVFFPLLYPDFF--------ANYHITPPRGVLLCG 405
Query: 387 PPGTGKTSSARVIAKQAGVPLLYVPLEI-----IMSKYYGESERLLGSVFSLANDLPDGG 441
PPGTGKT AR +A A V + ++SK+ GE+ER L +F A
Sbjct: 406 PPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQK-NQPS 464
Query: 442 IIFLDEVDSFASARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPAL-- 499
IIF DE+D A R S+ + I+S +L +DG + +VV+I ATNR + +D AL
Sbjct: 465 IIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRR 524
Query: 500 ISRFDSIICFDLPDQQTRAEI----SAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQA 555
RFD F LP + RAEI + ++ K + + + G D++ +C +A
Sbjct: 525 PGRFDREFFFPLPGYEARAEILDIHTRKWKDPPPKELKTELAASCVGYCGADLKALCTEA 584
>Os06g0669400 Similar to FtsH protease (VAR2) (Zinc dependent protease)
Length = 609
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 328 MDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGP 387
M+ + V ++++AG + K++ + + L+ PE + + P+ VL GP
Sbjct: 138 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVG--------ARIPKGVLLVGP 188
Query: 388 PGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDE 447
PGTGKT A+ IA +AGVP + + + G + +F A + I+F+DE
Sbjct: 189 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP-CIVFVDE 247
Query: 448 VDSFASARDSEM---HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SR 502
+D+ R + + ++ + L+ +L ++DGFE + ++VIAATNR + LD AL+ R
Sbjct: 248 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGR 307
Query: 503 FDSIICFDLPDQQTRAEISAQYA---KHLTKSELFQFSLATEEMSGRDIRDICQQA 555
FD + D+PD + R EI + K T L ++ T SG D+ ++ +A
Sbjct: 308 FDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEA 363
>Os04g0284600 Similar to TAT-binding protein 1 (Fragment)
Length = 357
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 326 IPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFE 385
I +D + + I G E Q E+ + ++L + + + + P+ VL
Sbjct: 103 IGVDSTSNEHYCGIGGLEKQIEELVEAVVLPIIHKNCFQRLG--------IHPPKGVLLY 154
Query: 386 GPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFL 445
GPPGTGKT A A Q L + + K GE RL+ F LA + IIF+
Sbjct: 155 GPPGTGKTLVAHAFASQTNATFLKLTGPQLAVKLIGEGARLVRDAFQLAKE-KAPCIIFI 213
Query: 446 DEVDSFASAR-DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SR 502
DE+D+ S DS E + I+ +L Q+DG + VIAATNR E LDPA + R
Sbjct: 214 DEIDAIGSKHFDSGDREVQQTIVE-LLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGR 272
Query: 503 FDSIICFDLPDQQTRAEISAQYAKHLTKSELFQF---SLATEEMSGRDIRDICQQA 555
D I F P +Q R I +++ + K+ F + T++ +G ++ +C +A
Sbjct: 273 LDQKIEFPHPSEQARVRILEIHSRKMDKNPDVNFEELACCTDDFNGAQLKAVCFEA 328
>AK110158
Length = 856
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 29/236 (12%)
Query: 336 WENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSS 395
++N+AG + K EI + + L++PE Y+ K PR + GPPGTGKT
Sbjct: 367 FKNVAGMDEAKEEIMEFVNF-LKNPEKYE--------KLGAKIPRGAILSGPPGTGKTLL 417
Query: 396 ARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASAR 455
A+ A +A P L V + + G + +F+ A IIF+DE+D+ +R
Sbjct: 418 AKATAGEAKAPFLSVSGSEFVEMFVGVGPSRVRDMFANAKKHAP-CIIFIDEIDAIGKSR 476
Query: 456 -------DSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSI 506
++ E+T L+ +L Q+DGF + VVV+A TNR + LD AL+ RFD
Sbjct: 477 GKGGNFGGNDEREST---LNELLVQMDGFGTEEHVVVLAGTNRPDVLDAALMRPGRFDRH 533
Query: 507 ICFDLPDQQTRAEISAQYAKHLTKSELFQFSLATEEM-------SGRDIRDICQQA 555
I D PD R +I + K LT L E++ SG D+ ++C +A
Sbjct: 534 IAIDRPDISGRKDIFLVHLKPLTLHSSTDRDLLAEKLSTLTPGFSGADVANVCNEA 589
>Os02g0649700 Peptidase M41, FtsH extracellular domain containing protein
Length = 822
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 27/236 (11%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V + ++AG + K E+E+ + L++PE Y + PR VL G PGTGKT
Sbjct: 343 VTFADVAGVDEAKEELEEIVEF-LRNPERY--------IRLGARPPRGVLLVGLPGTGKT 393
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
A+ +A +A VP + + Y G + +F+ A IIF+DE+D+ A
Sbjct: 394 LLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKK-ESPSIIFIDEIDAVAK 452
Query: 454 ARDSEM----HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPAL--ISRFDSII 507
+RD ++ + L+ +L ++DGF+ + V+V+ ATNR + LDPAL RFD ++
Sbjct: 453 SRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVV 512
Query: 508 CFDLPDQQTRAEISAQYAKHLTKSE--------LFQFSLATEEMSGRDIRDICQQA 555
+ PD+ R I H+++ E L + T +G D+ ++ +A
Sbjct: 513 MVEAPDRFGRESI---LKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEA 565
>Os04g0498800 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 578
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V W++I G + K++++ + ++ +D + + R VL GPPG KT
Sbjct: 301 VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLG--------ISPIRGVLLHGPPGCSKT 352
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
+ A+ A A + + SKY GE E LL F +A L IIF DE D+ A
Sbjct: 353 TLAKAAAHAAQASFFSLSGAELYSKYVGEGEALLRRTFQMAR-LASPSIIFFDEADAIAP 411
Query: 454 ARDSEMHEAT------RRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDS 505
R ++ R+LS +L ++DG E ++V+AATNR +D AL+ RFD
Sbjct: 412 KRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDM 471
Query: 506 IICFDLPDQQTRAEISAQYAKHL---TKSELFQFSLATEEMSGRDIRDICQQA 555
++ PD + R EI + + + +L++ + TE +G D+ +C++A
Sbjct: 472 VLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLCREA 524
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 19/237 (8%)
Query: 337 ENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSSA 396
E IAG R + + + + P +Y AR F PR +L GP GTGK S
Sbjct: 35 EVIAG----NRAVLEALRELVMYPVLYAREARVLGLNF----PRGLLLHGPSGTGKKSMV 86
Query: 397 RVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGG---IIFLDEVDSFAS 453
R + ++ L + + + GE E+ + F+ A G +IF+DE+D
Sbjct: 87 RAVVRECNAHLTVIDSISVHKPHAGEGEKFMREAFTEAYSQASQGRPAVIFIDELDDICP 146
Query: 454 ARDSEMHEATRRILSVILRQIDGFEQDR--RVVVIAATNRKEDLDPALI--SRFDSIICF 509
R S + + RI+ +L +DG +VV+A+ R + ++ AL RFDS I
Sbjct: 147 PRGSRREQGS-RIVGQLLTLMDGKSSKLLPHLVVVASATRVDAIESALRRPGRFDSEIEV 205
Query: 510 DLPDQQTRAEISAQYAKHLTKSE---LFQFSLATEEMSGRDIRDICQQAERHWASKL 563
+P + R EI Y K+L E L + + G D++ +C++A R +L
Sbjct: 206 TVPTAEERFEILKLYTKNLHLGECVDLQSVAASCNGYVGADLQALCREAARRAYGRL 262
>AK110388
Length = 957
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 28/217 (12%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V W+++ G E K+EI +TI L L+ PE++ A+ + VL GPPG GKT
Sbjct: 654 VKWDDVGGLEEAKKEILETIELPLKHPELFSGGAK---------QRAGVLMYGPPGCGKT 704
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
A+ IA + G+ + V +++ Y GESE+ + +F A D I F DE+D+ A
Sbjct: 705 LLAKAIATEMGLNFISVKGPELINMYVGESEKNIRLLFQRARD-NSPCICFFDELDALAP 763
Query: 454 ARDSEMHEA--TRRILSVILRQIDGF-------EQDRRVVVIAATNRKEDLDPALI--SR 502
R ++ RI++ +L ++DG +V +I ATNR + LDP+L+ R
Sbjct: 764 KRGAKGDSGGVMDRIVAQLLAEVDGVGGTKSDGSASAQVFIIGATNRPDLLDPSLLRPGR 823
Query: 503 FDSIICFDLPDQQTRAEISAQYAKHLTKSELFQFSLA 539
FD +C+ P Q + +++A K LT+ +F LA
Sbjct: 824 FDR-LCYLGPPQNKKEQVAA--VKALTR----KFKLA 853
>Os06g0109400 AAA ATPase domain containing protein
Length = 770
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 308 SDLEGMGVRVYGFDETS-----SIPMDGSGT---VMWENIAGYEPQKREIEDTILLALQS 359
+++EG+ + + F+E + S+ +G + V W+++ G + ++E + I+ ++
Sbjct: 458 NEIEGLSITMDDFEEATKMVQPSLRREGFSSIPDVTWDDVGGLDSLRKEFDRYIIRCIKQ 517
Query: 360 PEVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKY 419
PE Y F N L GPPG GKT A+ +A +AG +++ +++KY
Sbjct: 518 PEEYK--------TFGLNMQAGFLLFGPPGCGKTLIAKAVAHEAGANFIHIKGPELLNKY 569
Query: 420 YGESERLLGSVFSLA-NDLPDGGIIFLDEVDSFASARDSEMHEATRRILSVILRQIDGFE 478
GESE + +F A + P I+F DEVD+ + R E R+L+ +L ++DG
Sbjct: 570 VGESESEVRKIFIRAQTNTP--CILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAG 627
Query: 479 QDRRVVVIAATNRKEDLDPALI--SRFDSIICFDLPDQQTRAEISAQYAKH 527
+ + V VI ATNR + +D A + RF LP R I A++
Sbjct: 628 ERKGVFVIGATNRIDVIDDAALRPGRFGKKHYVPLPGADERVSILRALARN 678
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 381 AVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDG 440
+L GPPG GKT+ A IA + GVP + ++S G SE + S+F A
Sbjct: 227 GLLLHGPPGCGKTTLAHAIANETGVPFYKISAPEVVSGVSGASEENIRSLFKKAYRTAP- 285
Query: 441 GIIFLDEVDSFASARDSEMHEATRRILSVILRQIDGFEQD-----------------RRV 483
I+F+DE+D+ AS R++ E RRI++ ++ +D + Q V
Sbjct: 286 SIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDEYHQQIGSGSGDVGSESAEKKPGYV 345
Query: 484 VVIAATNRKEDLDPAL--ISRFDSIICFDLPDQQTRAEISAQYAKHLT---KSELFQFSL 538
+VI ATNR + +D AL RFD I +PD+ R +I ++L + +L + +
Sbjct: 346 IVIGATNRPDAVDQALRRPGRFDREISLGVPDEYARKKILMMLTRNLRLEGQLDLLKIAR 405
Query: 539 ATEEMSGRDIRDICQQA 555
AT G D++ + +A
Sbjct: 406 ATSSFVGADLKALVDKA 422
>Os02g0706500 CbxX/CfqX family protein
Length = 616
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 320 FDETSSIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRP 379
F S SG +EN+ + KR IE +ARAT + P
Sbjct: 329 FKALKSTSASLSGGAGFENVILHPSLKRRIE--------------HLARATANTKSHDAP 374
Query: 380 -RAVLFEGPPGTGKTSSARVIAKQAGVPLLYV------PLEIIMSKYYGESERLLGSVFS 432
R +LF GPPGTGKT AR +A+++G+ + PL E+ + +F
Sbjct: 375 FRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-------SEAVTKIHQIFD 427
Query: 433 LANDLPDGGIIFLDEVDSFASARDS-EMHEATRRILSVILRQIDGFEQDRRVVVIAATNR 491
A G ++F+DE D+F R+S M EA R L+ +L + +Q R +V++ ATNR
Sbjct: 428 WAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTG--DQSRDIVLVLATNR 485
Query: 492 KEDLDPALISRFDSIICFDLPDQQTRAEISAQYAKHLTKSE----LFQFSLATEEMSGRD 547
DLD A+ R D +I F LP ++ R ++ Y H E F SL ++
Sbjct: 486 PSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQ 545
Query: 548 IRDICQQAERHWASKL 563
++DI R A K+
Sbjct: 546 VKDISDDLLREAARKI 561
>Os05g0376200 Similar to Cell division control protein 48 homolog B (AtCDC48b)
Length = 391
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V W++I G + K++++ + ++ +D + + R VL GPPG KT
Sbjct: 135 VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLG--------ISPIRGVLLHGPPGCSKT 186
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
+ A+ A A + + SKY GE E LL F +A L IIF DE D+ A
Sbjct: 187 TLAKAAAHAAQASFFSLSGAELYSKYVGEGEALLRRTFQMAR-LASPSIIFFDEADAIAP 245
Query: 454 ARDSEMHEAT------RRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDS 505
R ++ R+LS +L ++DG E ++V+AATNR +D AL+ RFD
Sbjct: 246 KRTGPSGNSSGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDM 305
Query: 506 IICFDLPDQQTRAEISAQYAKHL---TKSELFQFSLATEEMSGRDIRDICQQAE 556
++ PD + R EI + + + +L++ + TE +G D+ + ++E
Sbjct: 306 VLYVPPPDAEGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLEGKSE 359
>Os06g0725900 Similar to Cell division protein ftsH homolog, chloroplast
precursor (EC 3.4.24.-) (DS9)
Length = 686
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 18/230 (7%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V + ++AG + K E+++ + L++P+ Y + P+ L GPPGTGKT
Sbjct: 229 VTFVDVAGADQAKLELQEVVDF-LKNPDKYTALG--------AKIPKGCLLVGPPGTGKT 279
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFAS 453
AR +A +AGVP + + G + +F A I+F+DE+D+
Sbjct: 280 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAP-CIVFIDEIDAVGR 338
Query: 454 ARDSEM---HEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALI--SRFDSIIC 508
R + + ++ + ++ +L ++DGF + V+V+AATNR + LD AL+ RFD +
Sbjct: 339 QRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVT 398
Query: 509 FDLPDQQTRAEISAQYA--KHLTKSELFQ-FSLATEEMSGRDIRDICQQA 555
D PD R +I ++ K L K F+ + T +G D++++ +A
Sbjct: 399 VDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEA 448
>Os11g0661400 AAA ATPase, central region domain containing protein
Length = 241
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 13/161 (8%)
Query: 407 LLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEVDSFASARDSE-MHEATRR 465
+ + + I SK++GE E+ + +VFSLA+ + +IF+DEVDS R++ HEA R+
Sbjct: 2 FINISMSSITSKWFGEGEKYVKAVFSLASKIAPS-VIFIDEVDSMLGRRENPGEHEAMRK 60
Query: 466 ILSVILRQIDGF--EQDRRVVVIAATNRKEDLDPALISRFDSIICFDLPDQQTRAEISAQ 523
+ + + DG + RV+V+ ATNR DLD A+I RF + +LPD R +I
Sbjct: 61 MKNEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIRRFPRRLMVNLPDASNREKILKV 120
Query: 524 YAKHLTKSELF------QFSLATEEMSGRDIRDICQQAERH 558
L K EL + T+ SG D++++C A +
Sbjct: 121 I---LAKEELAPGIDMDSLATMTDGYSGSDLKNLCVTAAHY 158
>Os05g0519400 Similar to N-ethylmaleimide sensitive factor NSF (Fragment)
Length = 743
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 20/190 (10%)
Query: 373 KFETNRPRAVLFEGPPGTGKTSSARVIAK--QAGVPLLYVPLEIIMSKYYGESERLLGSV 430
K + +L GPPGTGKT AR I K P + E+ +SK+ GE+E+ + +
Sbjct: 247 KLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEV-LSKFVGETEKNVRDL 305
Query: 431 FSLA-------NDLPDGGIIFLDEVDSFASARDSE-----MHEATRRILSVILRQIDGFE 478
F+ A D D +I DE+D+ +R S +H++ I++ +L +IDG E
Sbjct: 306 FADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDS---IVNQLLTKIDGVE 362
Query: 479 QDRRVVVIAATNRKEDLDPALI--SRFDSIICFDLPDQQTRAEISAQYAKHLTKSELFQF 536
V++I TNRK+ LD AL+ R + I +LPD+ R +I + + +S
Sbjct: 363 ALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSP 422
Query: 537 SLATEEMSGR 546
++ +E++ R
Sbjct: 423 NVNLQELAAR 432
>Os06g0229066 Twin-arginine translocation pathway signal domain containing
protein
Length = 486
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 334 VMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPPGTGKT 393
V ++++AG + K++ ++ I+ L+ PE + + T P+ VL GPPGTGKT
Sbjct: 213 VTFDDVAGVDEAKQDFQE-IVQFLKFPEKFTAVGART--------PKGVLLVGPPGTGKT 263
Query: 394 SSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLAN-DLPDGGIIFLDEVDSFA 452
A+ IA +AGVP + + + G + +F A P ++F+DE+D+
Sbjct: 264 LLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKASAP--CLVFIDEIDAVG 321
Query: 453 SARDSEM---HEATRRILSVILRQI-DGFEQDRRVVVIAATNRKEDLDPALI--SRFDSI 506
R + + ++ + L+ +L ++ D VVVIAATNR E LD AL+ RFD
Sbjct: 322 RQRGAGIGGGNDEREQTLNQLLTEMDGFGGGDGGVVVIAATNRPEILDAALLRPGRFDRR 381
Query: 507 ICFDLPDQQTRAEISAQYA--KHLTKS-ELFQFSLATEEMSGRDIRDICQQA 555
+ LPD + R EI + K L L ++ T SG D+ ++ +A
Sbjct: 382 VSVGLPDVRGREEILLVHGANKRLDPGVSLAVVAMRTPGFSGADLANLMNEA 433
>Os02g0697600 AAA ATPase domain containing protein
Length = 640
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Query: 380 RAVLFEGPPGTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPD 439
R +LF GPPGTGKT +AR +A+++G+ + + + ++ + +F A
Sbjct: 397 RNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGSQAVTKIHQLFDWAKKSNR 455
Query: 440 GGIIFLDEVDSFASARD-SEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPA 498
G ++F+DE D+F R+ + M EA R L+ +L + +Q + +V+ ATNR DLD A
Sbjct: 456 GLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTG--DQSKDIVLALATNRPGDLDSA 513
Query: 499 LISRFDSIICFDLPDQQTRAEISAQYA-KHLTKS 531
+ R D ++ F LP + R+++ Y K++ K+
Sbjct: 514 VADRIDEVLEFPLPGEDERSKLFKLYLDKYIMKA 547
>Os04g0479000 Similar to HPV16 E1 protein binding protein (Thyroid hormone
receptor interactor 13) (TRIP13 protein)
Length = 312
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
Query: 380 RAVLFEGPPGTGKTSSARVIAKQAGV---------PLLYVPLEIIMSKYYGESERLLGSV 430
R VL GPPGTGKTS + +A++ + L+ V + SK++ ES +L+ +
Sbjct: 128 RIVLLHGPPGTGKTSLCKALAQKLSIRFKSRYSMCQLIEVNAHSLFSKWFSESGKLVAKL 187
Query: 431 FSLANDL--PDGGIIF--LDEVDSFASARDSEMHEA----TRRILSVILRQIDGFEQDRR 482
F ++ + ++F +DEV+S A+AR + + + + R+++ +L Q+D +
Sbjct: 188 FQKIQEMVEEESNLVFVLIDEVESLAAARQAAISGSEPSDSIRVVNALLTQMDKLKSWPN 247
Query: 483 VVVIAATNRKEDLDPALISRFDSIICFDLPDQQTRAEI 520
V+++ +N +D A + R D P Q R EI
Sbjct: 248 VIILTTSNITTAIDIAFVDRADIKAYVGPPTLQARYEI 285
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.133 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,678,049
Number of extensions: 852507
Number of successful extensions: 2536
Number of sequences better than 1.0e-10: 52
Number of HSP's gapped: 2384
Number of HSP's successfully gapped: 58
Length of query: 611
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 504
Effective length of database: 11,448,903
Effective search space: 5770247112
Effective search space used: 5770247112
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 159 (65.9 bits)