Os02g0697600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os02g0697600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.35 | 0.424 | 8.95 | 1.25 | 2.32 | 1.03 | 0.287 | -0.64 | -0.0896 | 15.8 | 23.27 | 395 | -- | -- |
| 81.51 | 0.42 | 8.95 | 1.18 | 2.34 | 1.22 | 0.333 | -- | -0.106 | 15.8 | 22.83 | 340 | -- | -- |
| 81.52 | 0.421 | 8.94 | 1.27 | 2.33 | 0.997 | -- | -0.78 | -0.0814 | 15.8 | 23.57 | 373 | -- | -- |
| 81.89 | 0.421 | 8.95 | 1.18 | 2.34 | 1.2 | -- | -- | -0.106 | 15.8 | 22.9 | 337 | -- | -- |
| 345.04 | 0.87 | 9.01 | 0.83 | -- | -1.25 | -- | -1.71 | -0.516 | -- | 27.05 | 1088 | -- | -- |
| 97.24 | 0.462 | 8.99 | 0.902 | 2.25 | -- | 0.4 | -- | -0.275 | 15.8 | -- | -- | -- | -- |
| 97.71 | 0.463 | 8.99 | 0.908 | 2.25 | -- | -- | -- | -0.273 | 15.8 | -- | -- | -- | -- |
| 313.86 | 0.829 | 9.05 | 0.431 | -- | -2 | -- | -- | -0.616 | -- | 33.51 | 1148 | -- | -- |
| 114.56 | 0.499 | 9 | -- | 2.28 | 0.614 | -- | -- | -0.3 | 15.8 | 23.1 | 340 | -- | -- |
| 377.95 | 0.908 | 8.99 | 0.815 | -- | -- | -- | -- | -0.333 | -- | -- | -- | -- | -- |
| 119.45 | 0.511 | 9.01 | -- | 2.24 | -- | -- | -- | -0.374 | 15.8 | -- | -- | -- | -- |
| 318.47 | 0.834 | 9.06 | -- | -- | -2.13 | -- | -- | -0.679 | -- | 33.51 | 1148 | -- | -- |
| 395.45 | 0.928 | 9.01 | -- | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 2 | 78.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 5 | 79.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 11 | 79.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 31 | 79.92 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 96 | 80.78 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 105 | 80.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 113 | 81.02 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 125 | 81.12 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 18 |
| 129 | 81.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 135 | 81.21 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 17 |
| 165 | 81.52 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 14 |
| 199 | 81.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 210 | 81.91 | radiation | 40 | 270 | < th | dose dependent | rect. | 2 | 14 |
| 251 | 82.16 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 14 | 17 |
| 256 | 82.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 289 | 82.29 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 299 | 82.33 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 300 | 82.34 | temperature | 20 | 30 | > th | dose independent | rect. | 17 | 15 |
| 356 | 82.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 6 |
| 376 | 82.57 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 380 | 82.58 | temperature | 10 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 425 | 82.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 439 | 82.77 | wind | 7 | 270 | < th | dose independent | rect. | 5 | 22 |
| 442 | 82.78 | radiation | 40 | 270 | < th | dose independent | rect. | 2 | 14 |
| 465 | 82.83 | temperature | 10 | 10 | > th | dose dependent | sin | 10 | NA |
| 483 | 82.89 | radiation | 20 | 90 | < th | dose independent | rect. | 13 | 19 |
| 533 | 83.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 537 | 83.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 545 | 83.04 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 551 | 83.06 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 562 | 83.08 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 17 | 15 |
| 563 | 83.08 | radiation | 40 | 270 | < th | dose dependent | sin | 7 | NA |
| 614 | 83.20 | temperature | 25 | 30 | < th | dose dependent | sin | 8 | NA |
| 632 | 83.23 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 11 | 10 |
| 686 | 83.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 691 | 83.37 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 716 | 83.43 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 9 |
| 717 | 83.43 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 730 | 83.45 | temperature | 15 | 270 | > th | dose independent | rect. | 11 | 10 |
| 795 | 83.57 | radiation | 40 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 796 | 83.57 | radiation | 40 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 813 | 83.61 | humidity | 90 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 832 | 83.64 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 8 |
| 857 | 83.68 | humidity | 70 | 90 | > th | dose independent | rect. | 3 | 14 |
| 864 | 83.69 | radiation | 40 | 270 | < th | dose independent | rect. | 11 | 20 |
| 872 | 83.70 | wind | 7 | 270 | < th | dose independent | rect. | 6 | 20 |
| 873 | 83.70 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 893 | 83.74 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 17 |
| 898 | 83.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 923 | 83.79 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 933 | 83.82 | humidity | 70 | 90 | > th | dose independent | rect. | 3 | 16 |
| 948 | 83.85 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 12 |
| 984 | 83.90 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 8 |
| 993 | 83.93 | radiation | 20 | 270 | < th | dose independent | rect. | 2 | 15 |
| 998 | 83.93 | humidity | 60 | 10 | > th | dose dependent | rect. | 4 | 16 |