Os06g0725900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9).
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Os06g0725900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell division protein ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.08 | 0.266 | 14.6 | 0.74 | 0.855 | 1.25 | 0.149 | -0.984 | 0.00402 | 13.1 | 24.9 | 1887 | -- | -- |
| 32.87 | 0.267 | 14.7 | 0.567 | 0.85 | 1.39 | 0.143 | -- | -0.0493 | 13.1 | 23.64 | 1928 | -- | -- |
| 32.17 | 0.264 | 14.6 | 0.744 | 0.859 | 1.26 | -- | -0.99 | 0.00489 | 13.1 | 24.99 | 1860 | -- | -- |
| 32.94 | 0.267 | 14.7 | 0.565 | 0.86 | 1.42 | -- | -- | -0.0524 | 13.1 | 23.65 | 1861 | -- | -- |
| 69.28 | 0.388 | 14.6 | 1.11 | -- | 1.3 | -- | -2.15 | 0.0558 | -- | 51.56 | 2458 | -- | -- |
| 59.86 | 0.363 | 14.7 | 0.0947 | 0.878 | -- | 0.158 | -- | -0.338 | 13 | -- | -- | -- | -- |
| 59.96 | 0.363 | 14.7 | 0.101 | 0.878 | -- | -- | -- | -0.337 | 13 | -- | -- | -- | -- |
| 73.73 | 0.4 | 14.7 | 0.568 | -- | 1.29 | -- | -- | -0.0873 | -- | 193.7 | 2448 | -- | -- |
| 39.79 | 0.294 | 14.7 | -- | 0.87 | 1.15 | -- | -- | -0.156 | 12.9 | 23.79 | 1714 | -- | -- |
| 107.92 | 0.485 | 14.7 | 0.0677 | -- | -- | -- | -- | -0.354 | -- | -- | -- | -- | -- |
| 60.23 | 0.363 | 14.7 | -- | 0.876 | -- | -- | -- | -0.348 | 13 | -- | -- | -- | -- |
| 76.31 | 0.407 | 14.7 | -- | -- | 1.3 | -- | -- | -0.184 | -- | 206.7 | 1002 | -- | -- |
| 108.04 | 0.485 | 14.7 | -- | -- | -- | -- | -- | -0.361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.48 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 7 | 29.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 45 | 29.93 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 46 | 29.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 126 | 30.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 169 | 30.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 196 | 30.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 394 | 31.57 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 409 | 31.61 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 431 | 31.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 462 | 31.76 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 473 | 31.80 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 719 | 32.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 746 | 32.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 747 | 32.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 848 | 32.75 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 991 | 33.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |