Os01g0757400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2.
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Os01g0757400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3) (Katanin p60 subunit A1) (p60 katanin). Splice isoform 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.18 | 0.556 | 3.27 | -0.487 | 0.547 | -0.149 | 0.698 | 2.35 | -0.00898 | 9.82 | 46.66 | 7 | -- | -- |
| 149.03 | 0.569 | 3.28 | -0.518 | 0.514 | -0.326 | 0.366 | -- | -0.0304 | 9.17 | 38.4 | 11 | -- | -- |
| 140.54 | 0.556 | 3.28 | -0.479 | 0.563 | -0.0778 | -- | 2.19 | -0.011 | 10.1 | 46.66 | 6 | -- | -- |
| 148.39 | 0.567 | 3.28 | -0.521 | 0.497 | -0.368 | -- | -- | -0.0107 | 9.66 | 38.34 | 25 | -- | -- |
| 156.76 | 0.586 | 3.28 | -0.486 | -- | -0.263 | -- | 2.56 | -0.00645 | -- | 49.89 | 6 | -- | -- |
| 151.94 | 0.578 | 3.28 | -0.517 | 0.589 | -- | 0.0266 | -- | -0.0187 | 10.2 | -- | -- | -- | -- |
| 151.94 | 0.577 | 3.28 | -0.516 | 0.588 | -- | -- | -- | -0.0185 | 10.2 | -- | -- | -- | -- |
| 161.37 | 0.592 | 3.3 | -0.42 | -- | -0.57 | -- | -- | 0.00295 | -- | 39.39 | 30 | -- | -- |
| 155.23 | 0.58 | 3.27 | -- | 0.492 | -0.377 | -- | -- | 0.0407 | 9.75 | 38.54 | 25 | -- | -- |
| 172.93 | 0.614 | 3.3 | -0.524 | -- | -- | -- | -- | -0.0196 | -- | -- | -- | -- | -- |
| 158.96 | 0.59 | 3.27 | -- | 0.591 | -- | -- | -- | 0.0389 | 10.2 | -- | -- | -- | -- |
| 167.9 | 0.604 | 3.29 | -- | -- | -0.561 | -- | -- | 0.0277 | -- | 39.35 | 30 | -- | -- |
| 180.18 | 0.627 | 3.28 | -- | -- | -- | -- | -- | 0.0386 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.79 | radiation | 30.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 2 | 138.36 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 3 | 138.63 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 5 | 138.67 | humidity | 90.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 7 | 138.78 | wind | 7.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 9 | 138.90 | radiation | 20.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 10 | 138.90 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 15 | 139.31 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 5 | 8 |
| 30 | 139.50 | wind | 3.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 31 | 139.62 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 13 |
| 33 | 139.69 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 15 | 22 |
| 37 | 139.88 | radiation | 1.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 44 | 140.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 50 | 140.27 | humidity | 80.0 | 90 | > th | dose independent | sin | 5 | NA |
| 51 | 140.28 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 11 | 2 |
| 59 | 140.37 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 62 | 140.52 | humidity | 80.0 | 90 | < th | dose independent | sin | 6 | NA |
| 84 | 140.60 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 103 | 140.66 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 108 | 140.71 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 13 |
| 111 | 140.73 | radiation | 40.0 | 10 | > th | dose independent | sin | 15 | NA |
| 114 | 140.77 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 13 |
| 124 | 140.85 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 130 | 140.93 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 132 | 140.93 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 134 | 140.93 | radiation | 1.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 135 | 140.93 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 1 |
| 136 | 140.93 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 137 | 140.93 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 140 | 140.95 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 7 |
| 155 | 140.97 | humidity | 80.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 163 | 141.05 | wind | 9.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 168 | 141.07 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 176 | 141.10 | humidity | 70.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 179 | 141.12 | radiation | 40.0 | 10 | > th | dose independent | rect. | 11 | 4 |
| 212 | 141.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 269 | 141.23 | radiation | 10.0 | 90 | < th | dose independent | sin | 3 | NA |
| 282 | 141.26 | radiation | 40.0 | 90 | > th | dose independent | rect. | 11 | 2 |
| 288 | 141.28 | radiation | 20.0 | 90 | > th | dose independent | rect. | 10 | 3 |
| 289 | 141.29 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 295 | 141.30 | radiation | 40.0 | 10 | > th | dose dependent | sin | 14 | NA |
| 296 | 141.30 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 322 | 141.37 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 358 | 141.51 | humidity | 50.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 359 | 141.51 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 10 | 3 |
| 366 | 141.55 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 381 | 141.57 | radiation | 10.0 | 90 | > th | dose independent | sin | 4 | NA |
| 404 | 141.63 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 11 |
| 408 | 141.64 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 20 | 17 |
| 412 | 141.65 | humidity | 80.0 | 10 | < th | dose independent | rect. | 1 | 13 |
| 416 | 141.66 | radiation | 40.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 493 | 141.73 | humidity | 90.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 576 | 141.88 | radiation | 40.0 | 10 | < th | dose independent | rect. | 11 | 21 |
| 600 | 141.91 | radiation | 20.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 639 | 141.96 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 675 | 142.01 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 712 | 142.06 | humidity | 80.0 | 10 | < th | dose independent | sin | 4 | NA |
| 775 | 142.13 | radiation | 40.0 | 10 | < th | dose independent | sin | 15 | NA |
| 802 | 142.16 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 804 | 142.16 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 818 | 142.18 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 11 | 21 |
| 886 | 142.23 | radiation | 40.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 894 | 142.25 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 22 | 9 |
| 923 | 142.27 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 926 | 142.27 | radiation | 1.0 | 90 | > th | dose dependent | no | NA | NA |
| 994 | 142.30 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 9 | 23 |