BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0166800 Os07g0166800|AK070524
(152 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0166800 Rad6 (Ubiquitin carrier protein) 318 1e-87
Os03g0791800 Rad6 (Ubiquitin carrier protein) 316 4e-87
Os05g0182500 Rad6 (Ubiquitin carrier protein) 313 3e-86
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 142 7e-35
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 142 1e-34
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 141 2e-34
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 141 2e-34
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 138 1e-33
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 134 2e-32
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 125 1e-29
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 122 8e-29
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 122 9e-29
Os01g0839700 Similar to Ubiquitin carrier protein 122 1e-28
Os05g0460200 Similar to Ubiquitin carrier protein 121 2e-28
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 121 2e-28
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 115 1e-26
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 108 2e-24
Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (E... 107 2e-24
Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (... 105 1e-23
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 91 3e-19
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 91 4e-19
Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (... 90 7e-19
Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 ... 89 1e-18
Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (... 88 2e-18
Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme Ubc... 85 2e-17
Os01g0925800 Similar to Ubiquitin conjugating enzyme 83 6e-17
D17786 77 3e-15
Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 75 1e-14
Os06g0193000 Similar to Ubiquitin conjugating enzyme 2 74 4e-14
Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 73 1e-13
Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 ... 72 2e-13
Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain contai... 72 2e-13
Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain contai... 71 3e-13
Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain contai... 69 2e-12
Os01g0677500 68 3e-12
Os02g0721500 67 4e-12
Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain contai... 65 1e-11
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 318 bits (814), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 121 PANSEAARLFSENKREYNRKVREIVEQSWTAD 152
PANSEAARLFSENKREYNRKVREIVEQSWTAD
Sbjct: 121 PANSEAARLFSENKREYNRKVREIVEQSWTAD 152
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 316 bits (810), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61 EDYPNKPPVVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 121 PANSEAARLFSENKREYNRKVREIVEQSWTAD 152
PANSEAARLFSENKREYNRKVREIVEQSWTAD
Sbjct: 121 PANSEAARLFSENKREYNRKVREIVEQSWTAD 152
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 313 bits (802), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/152 (98%), Positives = 150/152 (98%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
MSTPARKRLMRDFKRL QDPPAGISGAP DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1 MSTPARKRLMRDFKRLMQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 121 PANSEAARLFSENKREYNRKVREIVEQSWTAD 152
PANSEAARLFSENKREYNRKVREIVEQSWTAD
Sbjct: 121 PANSEAARLFSENKREYNRKVREIVEQSWTAD 152
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 142 bits (359), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR+ ++ K LQ+DPP S P ++ W A I GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL++QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARLFSENKREYNRKVR 142
E A ++ ++ +Y R
Sbjct: 122 EIAHMYKTDRHKYENTAR 139
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F + + F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARLFSENKREYNRKVREIVEQSWT 150
E A ++ ++ +Y E +SWT
Sbjct: 122 EIAHMYKTDRPKY-----ETTARSWT 142
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A + GP D+P+ GG F +T+ F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARLFSENKREYNRKVREIVEQSWT 150
E A ++ ++ +Y R SWT
Sbjct: 122 EIAHMYKTDRAKYESTAR-----SWT 142
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F + + F DYP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARLFSENKREYNRKVREIVEQSWT 150
E A ++ ++ +Y R SWT
Sbjct: 122 EIAHMYKTDRAKYESTAR-----SWT 142
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 90/138 (65%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A +R++++ K LQ+DPP S P +++ W A I GP+D+P+ GG F +T+ F DYP
Sbjct: 2 ALRRIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F +++FHPNI ++G+ICLDIL++QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFKTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 EAARLFSENKREYNRKVR 142
E A + ++ Y R
Sbjct: 122 EIAHMCKTDRLRYESTAR 139
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 84/138 (60%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 64
A KR+ ++ L++DPP S P ++ W A I GP D+P+ GG F + + F DYP
Sbjct: 2 ASKRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYP 61
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
KPP V F ++++HPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVP 121
Query: 125 EAARLFSENKREYNRKVR 142
E A ++ + Y R
Sbjct: 122 EIAHVYKSQRPRYEETAR 139
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 127
Query: 127 ARLFSENKREYNRKVRE 143
A+ + N+ E +E
Sbjct: 128 AKHWKANEAEAVETAKE 144
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 122 bits (307), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
+RL + L G+S P +NI W I G T ++G +++L+L F +YP K
Sbjct: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP VRF + FHPN+ A G+ICLDILQ++WS YDV IL SIQSLL +PN +SP N++A
Sbjct: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
Query: 127 ARLFSENKREYNRKVREIVE 146
A L+ N+ E+ + V ++ +
Sbjct: 170 AALWP-NQDEFRKMVEKLYK 188
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPH-----DNNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
AR RL + K +++ P G P N+M+W+ I G T W+GG + LTL F
Sbjct: 6 ARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYPLTLHF 65
Query: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
Query: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
P PA ++ +F ++K EY R+VR +Q
Sbjct: 126 PADPAQTDGYHIFIQDKPEYKRRVRVQAKQ 155
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 25 SGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84
+G D+N+ W I GP DT +DGG F + F ++YPN PPTVRF S M+HPN+Y D
Sbjct: 29 AGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPD 88
Query: 85 GSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFS 131
G +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ +
Sbjct: 89 GRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWR 148
Query: 132 ENKREYNRKVREIVEQS 148
E + ++ +KVR +V +S
Sbjct: 149 EKRDDFKKKVRRLVRKS 165
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 87/145 (60%), Gaps = 14/145 (9%)
Query: 18 QDPPAGIS-GAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76
++P G S G D+N+ W I GP DT +DGG F + F ++YPN PP+VRF S M
Sbjct: 21 KNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEM 80
Query: 77 FHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123
+HPN+Y DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN
Sbjct: 81 WHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPAN 140
Query: 124 SEAARLFSENKREYNRKVREIVEQS 148
EAA+ + E + ++ +KVR IV +S
Sbjct: 141 IEAAKDWREKRDDFKKKVRRIVRKS 165
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 5 ARKRLMRDFKRLQQDPPAGISGAPHD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
AR RL + K +++ P G P N+M+W+ I G T W+GG F LTL F
Sbjct: 6 ARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHF 65
Query: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
Query: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
P PA ++ LF ++ EY R+VR +Q
Sbjct: 126 PADPAQTDGYHLFIQDPTEYKRRVRLQAKQ 155
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Query: 5 ARKRLMRDFKRLQQDPPAG--ISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
+R RL +++K +Q++ A I D+NI W A+I GP +TP++GG F+L E
Sbjct: 4 SRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQ 63
Query: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
YP PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 64 YPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
Query: 122 ANSEAARLF-SENKREYNRKVR 142
N ++ L S + R Y R
Sbjct: 124 LNCDSGNLLRSGDIRGYQSMAR 145
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 14/152 (9%)
Query: 8 RLMRDFKRLQQDPPAGIS-----GAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
R+ ++ K L DPP G+S ++++ + A I GPD+T + G F L +Q E
Sbjct: 10 RMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKIQIPER 69
Query: 63 YPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNP 118
YP +PP V FV+ ++HPNI G ICLDIL + W P ++A +LTSI LL DPNP
Sbjct: 70 YPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNP 129
Query: 119 NSPANSEAARLFSENKREYNRKVREIVEQSWT 150
+ +E +R + +YNR+V +I +SWT
Sbjct: 130 DDGLMAEISREY-----KYNRQVFDINARSWT 156
>Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2-24 kDa)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(E2-EPF5)
Length = 252
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
++L ++ K L + PP GI +D++ A I GP TP++ G F++ L + D+P
Sbjct: 13 RQLAKELKSLDESPPEGIKVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRDFPQS 72
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP F++++FHPNI G IC++ L+ W+P + +L ++ LL +P P S N +A
Sbjct: 73 PPKGFFLTKIFHPNIATSGEICVNTLKKDWNPSLGLRHVLLVVRCLLIEPFPESALNEQA 132
Query: 127 ARLFSENKREYNRKVR 142
+L EN EY R R
Sbjct: 133 GKLLLENYEEYARHAR 148
>Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19)
(Ubiquitin-protein ligase I) (Ubiquitin carrier protein
I) (SUMO-1-protein ligase) (SUMO- 1 conjugating enzyme)
(Ubiquitin carrier protein 9) (p18)
Length = 139
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 32 NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
N+M+W +I G + T W+GG F LT+QFTEDYP P+ +F S FH N+Y G++CL I
Sbjct: 5 NLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAVCLSI 64
Query: 92 LQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS---EAARLFSENKREYNRKVREIVE 146
L W P V IL IQ L DPNPNS A + E R + + ++R I++
Sbjct: 65 LSTAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRTWRSTGNAFVSRLRSILQ 122
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ ++ L + S P +N+ W + I GP +P++GG F L + F DYP K
Sbjct: 62 KRIQKELMDLNA---SDCSAGPKGDNLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFK 118
Query: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
PP V F +R++H N+ + G++ +DIL+ WSP ++ +L +I++++ +P+P P
Sbjct: 119 PPMVTFKTRIYHCNVDSTGNLSMDILREGWSPALTISKVLLAIKAIITNPDPYCPLVPSI 178
Query: 127 ARLFSENKREYNRKVRE 143
L+ ++ +++ E
Sbjct: 179 GHLYLTDRTKHDEIAAE 195
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 2 STPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTE 61
+P RL +D L IS P+ + ++ V PD+ + GG F T Q
Sbjct: 27 QSPGELRLHKDIAELNLPKSTRIS-FPNGKDDLMNFEVTIRPDEGYYVGGKFIFTFQVPP 85
Query: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
YP++PP V+ ++++HPNI +G++CL+IL+ W P+ +V I+ + L PN P
Sbjct: 86 AYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDP 145
Query: 122 ANSEAARLFSENKREYNRKVREIVEQSWTAD 152
N EAA + +N ++ R V+ + + +
Sbjct: 146 LNHEAAAVLRDNPEKFERNVQRAMAGGYVGE 176
>Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 2 STPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTE 61
+P RL +D L I+ P+ + ++ + PD+ + GG F TLQ
Sbjct: 27 QSPGELRLHKDIAELNLPKKTNIT-FPNGKDDLMNIEITLRPDEGYYVGGAFVFTLQVPP 85
Query: 62 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
YP++PP V+ ++++HPNI DG++CL+IL+ W P+ ++ I+ + L PN P
Sbjct: 86 TYPHEPPKVKCTTKVYHPNIDLDGNVCLNILREDWKPVLNINTIVYGLNLLFIQPNDEDP 145
Query: 122 ANSEAARLFSENKREYNRKVREIVEQSWT 150
N +AA + ++ +++ R V+ + +
Sbjct: 146 LNHDAAAVLRDDPQKFRRNVQTAMSGGYV 174
>Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19)
(Ubiquitin- protein ligase 5) (Ubiquitin carrier protein
5)
Length = 144
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Query: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIF-GPDDTPWDGGTFKLTLQF 59
MS+P+++R M K + D + N+ M V F GP ++ + GG +K+ ++
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMV-----NDGMQEFFVEFRGPTESIYQGGVWKVRVEL 55
Query: 60 TEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPN 117
+ YP K P++ FV++++HPN+ GS+CLD++ WSP++D+ + + LL PN
Sbjct: 56 PDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPN 115
Query: 118 PNSPANSEAARLFSENKREYNRKVR 142
P+ P N EAA L ++ Y +KV+
Sbjct: 116 PSDPLNGEAAALMMRDRPAYEQKVK 140
>Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 150
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 75/142 (52%)
Query: 10 MRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPT 69
MR++ P + P+ + ++ +I PD+ + GGTF T Q + YP++PP
Sbjct: 1 MREYISELNLPKSTSISFPNGKDDLMNFEIIVRPDEGYYLGGTFVFTFQVSPSYPHEPPK 60
Query: 70 VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARL 129
V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L PN P N EAA +
Sbjct: 61 VKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAV 120
Query: 130 FSENKREYNRKVREIVEQSWTA 151
+N + + V+ + +
Sbjct: 121 LRDNPKLFEANVKRAMAGGYVG 142
>Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme UbcH5B (Fragment)
Length = 234
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%)
Query: 36 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ 95
W VI GP TP+ GG F + + F DYP +PP + F ++++HPNI G + LDI Q+
Sbjct: 55 WEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDN 114
Query: 96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVREIVEQ 147
WSP + +L S+L DP + P N A+ + Y K R ++
Sbjct: 115 WSPALTINKLLLCFVSVLFDPLLDRPTNRCIAKQYKHEYEAYEEKARAWTQK 166
>Os01g0925800 Similar to Ubiquitin conjugating enzyme
Length = 195
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 10 MRDFKRLQQD--------PPAGISGAPHDNN-IMLWNAVIFGPDDTPWDGGTFKLTLQFT 60
M D R+Q++ +G+S A HD + I I GP TP++GGTF + ++
Sbjct: 1 MVDVSRVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLP 60
Query: 61 EDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
YP +PP ++F+++++HPNI + +G+ICLDIL++QWSP + L S+Q+LL P P+
Sbjct: 61 GGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAPD 120
Query: 120 SPANSEAARLFSENKREYNRKVR 142
P ++ A+ + + ++ R
Sbjct: 121 DPQDAVVAQQYLRDYSTFSATAR 143
>D17786
Length = 103
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 123
P KPP F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPN + P
Sbjct: 26 PFKPPKSSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNGDDPLV 85
Query: 124 SEAARLFSENKREY 137
E A ++ ++ +Y
Sbjct: 86 PEIAHMYKTDRAKY 99
>Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 467
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ D+K L++D PA I +N + L AVI GP TP+ G F QFT YP+
Sbjct: 185 KRIQYDWKLLEKDLPASIYVRVSENRMDLLRAVIIGPQGTPYHDGLFFFDAQFTSTYPST 244
Query: 67 PPTVRFVS--RMFHPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
PP V + S +PN+YA G +CL +L +W+ + + +L SIQ+L+ +
Sbjct: 245 PPVVYYHSGGLRLNPNLYACGKVCLSLLGTWSGSGCEKWNSAHSTMLQVLVSIQALVLNE 304
Query: 117 NP--NSPA 122
NP N P
Sbjct: 305 NPYFNEPG 312
>Os06g0193000 Similar to Ubiquitin conjugating enzyme 2
Length = 240
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KRL +++ L ++PP I P N+I+ W+ V+ G TP++GG + L+F DYP K
Sbjct: 8 KRLQKEYHSLCKEPPPQIVARPLPNDILEWHFVLEGSAGTPFEGGYYYGKLKFPPDYPFK 67
Query: 67 PPTVRFV--SRMFHPNIYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCD 115
PP++ S F P+ ICL D W+P++ VA+ILT + S + D
Sbjct: 68 PPSISMTTPSGRFAPH----KRICLSMSDFHPESWNPMWSVASILTGLLSFMMD 117
>Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 485
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ D+K L++D PA I ++ + L A I GP TP+ G F +QF+ YP
Sbjct: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
Query: 67 PPTVRFVSRMF--HPNIYADGSICLDILQ-------NQWSPIYD-VAAILTSIQSLLCDP 116
PP+V + S +PN+Y +G +CL +L W+P + +L SIQ+L+ +
Sbjct: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
Query: 117 NP--NSPANSEAARLFSENK--REYN 138
P N P + A S + EYN
Sbjct: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
>Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19)
(Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein) (PM42)
Length = 161
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 2 STPARK--------RLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTF 53
S+P+RK RL ++ Q +PP+G DN + W + G T + G T+
Sbjct: 5 SSPSRKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDN-LQRWVIEVAGAAGTLYAGETY 63
Query: 54 KLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAIL 106
+L + F E YP + P V F+ HP+IY++G ICLDIL + WSP V+++
Sbjct: 64 QLQVDFPEHYPMEAPQVIFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVC 117
>Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 374
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
K + ++K LQ+D P I +++ I L A I GP TP+ G F ++F +YP
Sbjct: 116 KTIQNEWKLLQKDLPESIYVRAYEDRIDLLRAAIVGPAGTPYHDGLFFFDVRFPSEYPQS 175
Query: 67 PPTVRFVSR--MFHPNIYADGSICLDILQNQWSPIYD--------VAAILTSIQSLLCDP 116
PP V + S +PN+Y G +CL +L W + + +L SIQ L+ +
Sbjct: 176 PPKVHYHSGGLRLNPNLYESGKVCLSLLNTWWGTGCEKWGKSKSTILQVLVSIQGLVLND 235
Query: 117 NP--NSPANSEAA 127
P N P N +A
Sbjct: 236 KPYFNEPGNKNSA 248
>Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 161
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 2 STPARK--------RLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTF 53
S+P+RK RL ++ Q PP+G DN + W + G T + G T+
Sbjct: 5 SSPSRKALSKIACNRLQKELAEWQVSPPSGFKYRVSDN-LQRWVIEVTGAAGTLYAGETY 63
Query: 54 KLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIYDVAAIL 106
+L + F E YP + P V F++ HP+IY++G ICLDIL + WSP V+++
Sbjct: 64 QLQVDFPEHYPMEAPQVIFLNPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVC 117
>Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 433
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
+R+ ++K L++D P I +++ + L AVI GP TP+ G F + F YP K
Sbjct: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
Query: 67 PPTVRFVSR--MFHPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
PP V + S +PN+Y G +CL +L +W+P + +L SIQ+L+ +
Sbjct: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
Query: 117 NP--NSPANSEAA 127
P N P + +A
Sbjct: 291 KPYFNEPGYAASA 303
>Os01g0677500
Length = 389
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ ++K L++D P I +++ + L AVI GP TP+ G F + F YP
Sbjct: 217 KRIQHEWKVLEKDLPDNIFVRVYEDRLELLRAVIIGPSGTPYHDGLFFFDVYFPPQYPRN 276
Query: 67 PPTVRFVS--RMFHPNIYADGSICLDILQN-------QWSPIYDVAAILTSIQSLLCDPN 117
P V + S +PN+YA G +CL +L +W+P +L SIQ+L+ +
Sbjct: 277 PLLVIYHSGGMRLNPNLYACGKVCLSLLNTWPGDGCEKWNPSNSTLQVLVSIQALVLNAK 336
Query: 118 P 118
P
Sbjct: 337 P 337
>Os02g0721500
Length = 290
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 8 RLMR-DFKRLQQDPPAGISGAPHD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQF-TEDYP 64
R++R + + L +DPP + P + W VI GP TP+ GGTF + +Q YP
Sbjct: 32 RIIRNELRLLWRDPPPYLRPGPEPVTDPFHWEVVIDGPAGTPYAGGTFPVDIQLPAAGYP 91
Query: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
P V F + ++HPNI +G++ LD WS + +L S+L DP + P N
Sbjct: 92 FVHPKVTFKTLVYHPNIDEEGNMVLD--AESWSCATKLRGLLIGFVSVLYDPLLDYPINY 149
Query: 125 EAARLFSENKREYNRKVR 142
+ A ++ + Y + R
Sbjct: 150 DIAEQYAYDYERYEAEAR 167
>Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 509
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
KR+ ++K L++D P I +++ + L AVI GP TP+ G F + F YP+
Sbjct: 247 KRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPSV 306
Query: 67 PPTVRFVSR--MFHPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
PP V + S +PN+YA G +CL +L +WSP + +L S+Q+L+ +
Sbjct: 307 PPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMLQVLVSVQALVLNA 366
Query: 117 NP 118
P
Sbjct: 367 KP 368
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,366,050
Number of extensions: 272561
Number of successful extensions: 593
Number of sequences better than 1.0e-10: 38
Number of HSP's gapped: 578
Number of HSP's successfully gapped: 38
Length of query: 152
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 60
Effective length of database: 12,232,113
Effective search space: 733926780
Effective search space used: 733926780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 151 (62.8 bits)