Os02g0634800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
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Os02g0634800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.29 | 0.291 | 12.3 | -1.27 | 0.624 | -1.27 | -0.0766 | 0.374 | -0.263 | 8.55 | 24.67 | 843 | -- | -- |
| 38.44 | 0.289 | 12.2 | -1.21 | 0.625 | -1.32 | 0.0108 | -- | -0.247 | 8.58 | 24.53 | 857 | -- | -- |
| 38.3 | 0.288 | 12.3 | -1.27 | 0.622 | -1.28 | -- | 0.337 | -0.263 | 8.57 | 24.7 | 853 | -- | -- |
| 38.44 | 0.289 | 12.2 | -1.21 | 0.619 | -1.32 | -- | -- | -0.248 | 8.57 | 24.52 | 858 | -- | -- |
| 52.45 | 0.337 | 12.3 | -1.38 | -- | -1.22 | -- | 0.781 | -0.295 | -- | 27.85 | 1426 | -- | -- |
| 63.46 | 0.373 | 12.2 | -0.837 | 0.498 | -- | 0.0223 | -- | 0.0166 | 7.76 | -- | -- | -- | -- |
| 63.46 | 0.373 | 12.2 | -0.837 | 0.498 | -- | -- | -- | 0.0166 | 7.75 | -- | -- | -- | -- |
| 52.84 | 0.339 | 12.3 | -1.24 | -- | -1.34 | -- | -- | -0.26 | -- | 25.1 | 1452 | -- | -- |
| 72.17 | 0.396 | 12.2 | -- | 0.589 | -0.702 | -- | -- | -0.0164 | 8.34 | 24.7 | 791 | -- | -- |
| 76.87 | 0.41 | 12.2 | -0.831 | -- | -- | -- | -- | 0.0237 | -- | -- | -- | -- | -- |
| 81.91 | 0.423 | 12.2 | -- | 0.492 | -- | -- | -- | 0.11 | 7.87 | -- | -- | -- | -- |
| 86.87 | 0.434 | 12.2 | -- | -- | -0.707 | -- | -- | -0.0161 | -- | 25.8 | 1390 | -- | -- |
| 95.06 | 0.455 | 12.2 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 8 | 36.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 18 | 36.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 57 | 37.29 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 67 | 37.41 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 117 | 37.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 144 | 38.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 207 | 38.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 219 | 38.44 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 236 | 38.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 261 | 38.58 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 268 | 38.59 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 315 | 38.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 354 | 38.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 434 | 38.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 448 | 38.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 466 | 38.95 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 535 | 39.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 597 | 39.11 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 709 | 39.21 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 781 | 39.29 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 800 | 39.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 834 | 39.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 866 | 39.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 904 | 39.38 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 960 | 39.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |