BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0634800 Os02g0634800|AK059694
(157 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 330 3e-91
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 121 2e-28
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 118 2e-27
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 116 6e-27
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 116 6e-27
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 115 2e-26
Os07g0166800 Rad6 (Ubiquitin carrier protein) 115 2e-26
Os03g0791800 Rad6 (Ubiquitin carrier protein) 114 2e-26
Os05g0182500 Rad6 (Ubiquitin carrier protein) 113 7e-26
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 112 1e-25
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 108 1e-24
Os01g0925800 Similar to Ubiquitin conjugating enzyme 101 3e-22
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 100 5e-22
Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (E... 99 1e-21
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 90 9e-19
Os01g0839700 Similar to Ubiquitin carrier protein 89 1e-18
Os05g0460200 Similar to Ubiquitin carrier protein 89 2e-18
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 86 2e-17
Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 ... 82 1e-16
Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme Ubc... 80 6e-16
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 75 2e-14
Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (... 73 7e-14
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 72 2e-13
Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (... 72 2e-13
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 71 4e-13
Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (... 70 6e-13
Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain contai... 70 9e-13
Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 ... 69 1e-12
Os03g0308000 Ubiquitin-conjugating enzyme, E2 domain contai... 69 2e-12
Os02g0721500 68 3e-12
D17786 65 3e-11
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 330 bits (845), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MQASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSI 60
MQASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSI
Sbjct: 1 MQASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSI 60
Query: 61 PEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ KE K++QR+ + DD +F W A I GP+++P+ GGVF + P YP
Sbjct: 5 RIIKELKDLQRDPPTSCSAGPVSDD--MFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPF 62
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFKTKVFHPNIN-SNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAAM 153
+ ++ ++ +R Y+S AR +T+ AM
Sbjct: 122 EIAHMCKTDRLR-YESTARGWTQKYAM 147
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ KE K++Q++ + +D +F W A I GPS++PF GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPF 62
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVSFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAAM 153
+ ++ ++ D Y+S AR +T+ AM
Sbjct: 122 EIAHMYKT-DRAKYESTARSWTQKYAM 147
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 116 bits (291), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ KE K++Q++ + +D +F W A I GPS++P+ GGVF + P YP
Sbjct: 5 RIQKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPF 62
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAAM 153
+ ++ ++ D Y++ AR +T+ AM
Sbjct: 122 EIAHMYKT-DRHKYENTARTWTQRYAM 147
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 116 bits (291), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ KE + + E + P I + N+ + +I GP+++P+EGGVF+L +PE+YP+
Sbjct: 9 RIIKETQRLLSEPA--PGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPM 66
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+
Sbjct: 67 AAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSD 125
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAA 152
+ ++ + ++ A+ +TRL A
Sbjct: 126 NIAKHWKANEAEAVET-AKEWTRLYA 150
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ KE K++Q++ + +D +F W A + GPS++P+ GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPF 62
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+V TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVALKTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAAM 153
+ ++ ++ D Y+S AR +T+ AM
Sbjct: 122 EIAHMYKT-DRAKYESTARSWTQKYAM 147
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Query: 4 SRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQ 63
+R RL +++K +Q++ A I D+NI W A+I GP +TP++GG F+L E
Sbjct: 5 ARKRLMRDFKRLQQDPPAG--ISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
Query: 64 YPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 124 LNCDSGNLLRSGDIRGYQSMAR 145
N ++ L S + R Y R
Sbjct: 122 ANSEAARLF-SENKREYNRKVR 142
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Query: 4 SRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQ 63
+R RL +++K +Q++ A I D+NI W A+I GP +TP++GG F+L E
Sbjct: 5 ARKRLMRDFKRLQQDPPAG--ISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
Query: 64 YPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 63 YPNKPPVVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 124 LNCDSGNLLRSGDIRGYQSMAR 145
N ++ L S + R Y R
Sbjct: 122 ANSEAARLF-SENKREYNRKVR 142
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 4 SRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQ 63
+R RL +++K + ++ A I D+NI W A+I GP +TP++GG F+L E
Sbjct: 5 ARKRLMRDFKRLMQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTED 62
Query: 64 YPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 124 LNCDSGNLLRSGDIRGYQSMAR 145
N ++ L S + R Y R
Sbjct: 122 ANSEAARLF-SENKREYNRKVR 142
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ KE K++Q++ +D +F W A I GP ++P+ GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPAGED--MFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPF 62
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVSFKTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAAM 153
+ ++ ++ D Y++ AR +T+ AM
Sbjct: 122 EIAHMYKT-DRPKYETTARSWTQKYAM 147
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 33 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLD 92
++F W A I GPS++P+ GGVF + P YP PP+V F TK++HPN++ G ICLD
Sbjct: 29 DLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFKPPKVNFQTKVYHPNIN-SNGSICLD 87
Query: 93 ILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTRLAA 152
ILK WSPA T+ V +I +L+ P PD PL + ++ +S R Y+ AR +T+ A
Sbjct: 88 ILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHVYKSQRPR-YEETARAWTQKYA 146
Query: 153 M 153
M
Sbjct: 147 M 147
>Os01g0925800 Similar to Ubiquitin conjugating enzyme
Length = 195
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 6 ARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYP 65
+R+ KE E R++ + D S I T I GP TP+EGG F + +P YP
Sbjct: 5 SRVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPGGYP 64
Query: 66 LLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
PP+++F+TK++HPN+ + G ICLDILK+ WSPA TL++ ++ AL++ P PD P +
Sbjct: 65 FEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAPDDPQD 124
Query: 126 C-DSGNLLRSGDIRGYQSMARMYTRLAA 152
+ LR D + + AR +T A
Sbjct: 125 AVVAQQYLR--DYSTFSATARYWTEAFA 150
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 20 SADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFH 79
DP + + NIF W I G + T +EG ++L+ + P +YP PP+VRF T FH
Sbjct: 62 GGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFH 121
Query: 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 131
PNV G ICLDIL++ WS A+ ++++ +I +L+ P DSPLN + L
Sbjct: 122 PNVD-AHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAAL 172
>Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2-24 kDa)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(E2-EPF5)
Length = 252
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
+L KE K + ++S I++I +D + A I+GP+ TP+E GVF++ + +P
Sbjct: 14 QLAKELKSL--DESPPEGIKVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRDFPQ 71
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+ FLTKIFHPN+ +GEIC++ LK W+P+ L+ V + L+ P P+S LN
Sbjct: 72 SPPKGFFLTKIFHPNIA-TSGEICVNTLKKDWNPSLGLRHVLLVVRCLLIEPFPESALNE 130
Query: 127 DSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
+G LL + Y AR+YT + A+ K
Sbjct: 131 QAGKLLLE-NYEEYARHARLYTSIHALKPKN 160
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 33 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLD 92
N++ W + I GP +P+EGG+F L P YP PP V F T+I+H NV TG + +D
Sbjct: 84 NLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFKPPMVTFKTRIYHCNVD-STGNLSMD 142
Query: 93 ILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTRLA 151
IL+ WSPA T+ V AI A++ +P+P PL G+L + + + A R A
Sbjct: 143 ILREGWSPALTISKVLLAIKAIITNPDPYCPLVPSIGHLYLTDRTKHDEIAAEWTMRFA 201
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 28 ICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTG 87
+ DDSN+F+W I GP +T ++GG F S P+ YP PP VRF ++++HPNV + G
Sbjct: 31 LVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNV-YPDG 89
Query: 88 EICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 133
+C+ IL W+P T++S+ +II++++ P +SP N ++ R
Sbjct: 90 RVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWR 148
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 28 ICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTG 87
+ DDSN+F+W I GP +T ++GG F + P+ YP PP VRF ++++HPNV + G
Sbjct: 31 LVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEMWHPNV-YPDG 89
Query: 88 EICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 133
+C+ IL W+P T++S+ +II++++ P +SP N ++ R
Sbjct: 90 RVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWR 148
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 2 QASRA--RLFKEYKEVQREKSADPDIQLICDDS---NIFKWTALIKGPSETPFEGGVFQL 56
QA+R R+ KE K + + + L D+S ++ + A I+GP ET + GVF L
Sbjct: 3 QAARLNLRMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVL 62
Query: 57 AFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDIL----KNAWSPAWTLQSVCRAII 112
IPE+YP PP V F+T I+HPN+ G ICLDIL K AW P+ + +V +I
Sbjct: 63 KIQIPERYPFQPPNVTFVTPIYHPNID-NGGRICLDILNLPPKGAWQPSLNIATVLTSIG 121
Query: 113 ALMAHPEPDSPL 124
L++ P PD L
Sbjct: 122 LLLSDPNPDDGL 133
>Os10g0447100 Similar to Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC 6.3.2.19)
(Ubiquitin- protein ligase 5) (Ubiquitin carrier protein
5)
Length = 144
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 21 ADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHP 80
+D ++++ D F +GP+E+ ++GGV+++ +P+ YP P + F+ KI+HP
Sbjct: 18 SDYKVEMVNDGMQEF--FVEFRGPTESIYQGGVWKVRVELPDAYPYKSPSIGFVNKIYHP 75
Query: 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAII-ALMAHPEPDSPLNCDSGNLL 132
NV +G +CLD++ WSP + L +V + L+ +P P PLN ++ L+
Sbjct: 76 NVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALM 128
>Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme UbcH5B (Fragment)
Length = 234
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 35 FKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDIL 94
F W +I GP+ TP+ GGVF + P YP PP++ F TK++HPN+ K G + LDI
Sbjct: 53 FHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGK-GRMALDIF 111
Query: 95 KNAWSPAWTLQSVCRAIIALMAHPEPDSPLN-CDSGNLLRSGDIRGYQSMARMYTR 149
++ WSPA T+ + ++++ P D P N C + + Y+ AR +T+
Sbjct: 112 QDNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIAKQY--KHEYEAYEEKARAWTQ 165
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
RL K+ E+ KS I ++ + I+ P E + GG F F +P YP
Sbjct: 33 RLHKDIAELNLPKSTR--ISFPNGKDDLMNFEVTIR-PDEGYYVGGKFIFTFQVPPAYPH 89
Query: 67 LPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+V+ TK++HPN+ + G +CL+IL+ W P + ++ + L + P + PLN
Sbjct: 90 EPPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDPLNH 148
Query: 127 DSGNLLRSGDIRGYQSMAR 145
++ +LR + +++ R
Sbjct: 149 EAAAVLRDNPEKFERNVQR 167
>Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 44 PSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWT 103
P E + GG F +P YP PP+V+ TK++HPN+ G +CL+IL+ W P
Sbjct: 67 PDEGYYVGGAFVFTLQVPPTYPHEPPKVKCTTKVYHPNIDLD-GNVCLNILREDWKPVLN 125
Query: 104 LQSVCRAIIALMAHPEPDSPLNCDSGNLLRS 134
+ ++ + L P + PLN D+ +LR
Sbjct: 126 INTIVYGLNLLFIQPNDEDPLNHDAAAVLRD 156
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 4 SRARLFKEYKEVQREKS----ADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFS 59
+R RL +E K ++ A P+ L N+ W I G T +EGG F L
Sbjct: 6 ARGRLAEERKAWRKNHPHGFVAKPET-LADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
Query: 60 IPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAH 117
E YP PP+ +F FHPNV + +G +CL IL + W PA T++ + I L+
Sbjct: 65 FSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
Query: 118 PEPDSPLNCDSGNLL 132
P P P D +L
Sbjct: 124 PNPADPAQTDGYHLF 138
>Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 150
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 40 LIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWS 99
+I P E + GG F F + YP PP+V+ TK++HPN+ + G +CL+IL+ W
Sbjct: 30 IIVRPDEGYYLGGTFVFTFQVSPSYPHEPPKVKCKTKVYHPNIDLE-GNVCLNILREDWK 88
Query: 100 PAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSG 135
P + +V + L P + PLN ++ +LR
Sbjct: 89 PVLNINTVIYGLNLLFTQPNDEDPLNHEAAAVLRDN 124
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 4 SRARLFKEYKEVQREKS----ADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFS 59
+R RL +E K ++ A P+ + +N+ W I G T +EGG + L
Sbjct: 6 ARGRLAEERKAWRKNHPHGFVAKPET-MADGSANLMIWHCTIPGKQGTDWEGGYYPLTLH 64
Query: 60 IPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAH 117
E YP PP+ +F FHPNV + +G +CL IL + W PA T++ + I L+
Sbjct: 65 FSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
Query: 118 PEPDSPLNCDSGNLL 132
P P P D ++
Sbjct: 124 PNPADPAQTDGYHIF 138
>Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19)
(Ubiquitin-protein ligase I) (Ubiquitin carrier protein
I) (SUMO-1-protein ligase) (SUMO- 1 conjugating enzyme)
(Ubiquitin carrier protein 9) (p18)
Length = 139
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 33 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLD 92
N+ W +I G T +EGG F L E YP P +F + FH NV + +G +CL
Sbjct: 5 NLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINV-YDSGAVCLS 63
Query: 93 ILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTRLA- 151
IL AW P+ T++ + I L P P+S S L R+ G ++R+ + L
Sbjct: 64 ILSTAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRTWRSTGNAFVSRLRSILQL 123
Query: 152 ---AMP 154
AMP
Sbjct: 124 CSRAMP 129
>Os12g0636800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 161
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 33 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKI-FHPNVHFKTGEICL 91
N+ +W + G + T + G +QL PE YP+ PQV FL HP++ + G ICL
Sbjct: 42 NLQRWVIEVTGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLNPAPMHPHI-YSNGHICL 100
Query: 92 DILKNAWSPAWTLQSVC 108
DIL ++WSPA T+ SVC
Sbjct: 101 DILYDSWSPAMTVSSVC 117
>Os03g0681400 Similar to Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19)
(Ubiquitin- conjugating enzyme 15) (Ubiquitin-protein
ligase) (Ubiquitin carrier protein) (PM42)
Length = 161
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 33 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKI-FHPNVHFKTGEICL 91
N+ +W + G + T + G +QL PE YP+ PQV FL HP++ + G ICL
Sbjct: 42 NLQRWVIEVAGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLHPAPMHPHI-YSNGHICL 100
Query: 92 DILKNAWSPAWTLQSVC 108
DIL ++WSPA T+ SVC
Sbjct: 101 DILYDSWSPAMTVSSVC 117
>Os03g0308000 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 313
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 7 RLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPL 66
R+ +E KE+Q S PD + + +IF+W I GP ++ FEGG++ +P YP
Sbjct: 16 RILQEVKEMQSNPS--PDFMAMPLEEDIFEWQFAILGPRDSEFEGGIYHGRIQLPSDYPF 73
Query: 67 LPPQVRFLTKIFHPNVHFKT-GEICLDILK---NAWSPAWTLQSVCRAIIALMAHP 118
PP LT P+ F+ +ICL I W P+W++++ A+IA M P
Sbjct: 74 KPPSFMLLT----PSGRFEIQKKICLSISNYHPEHWQPSWSVRTALVALIAFMPTP 125
>Os02g0721500
Length = 290
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 32 SNIFKWTALIKGPSETPFEGGVFQLAFSIPEQ-YPLLPPQVRFLTKIFHPNVHFKTGEIC 90
++ F W +I GP+ TP+ GG F + +P YP + P+V F T ++HPN+ + G +
Sbjct: 57 TDPFHWEVVIDGPAGTPYAGGTFPVDIQLPAAGYPFVHPKVTFKTLVYHPNID-EEGNMV 115
Query: 91 LDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTR 149
LD +WS A L+ + ++++ P D P+N D + D Y++ AR +TR
Sbjct: 116 LD--AESWSCATKLRGLLIGFVSVLYDPLLDYPINYDIAEQY-AYDYERYEAEARAWTR 171
>D17786
Length = 103
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 65 PLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
P PP+ F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P D PL
Sbjct: 26 PFKPPKSSFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNGDDPL 84
Query: 125 NCDSGNLLRS 134
+ ++ ++
Sbjct: 85 VPEIAHMYKT 94
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,683,826
Number of extensions: 228684
Number of successful extensions: 477
Number of sequences better than 1.0e-10: 31
Number of HSP's gapped: 449
Number of HSP's successfully gapped: 31
Length of query: 157
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 65
Effective length of database: 12,232,113
Effective search space: 795087345
Effective search space used: 795087345
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)