Os02g0120600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19) (Ubiquitin- protein ligase 9) (Ubiquitin carrier protein 9) (UBCAT4B).
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Os02g0120600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19) (Ubiquitin- protein ligase 9) (Ubiquitin carrier protein 9) (UBCAT4B).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.2 | 0.458 | 12 | -1.39 | 1.25 | -0.761 | 0.39 | -3.43 | -0.484 | 12.4 | 28.54 | 1116 | -- | -- |
| 96.24 | 0.457 | 11.9 | -0.776 | 1.25 | -1.11 | 0.325 | -- | -0.478 | 12.4 | 29.08 | 1123 | -- | -- |
| 95.49 | 0.455 | 12 | -1.43 | 1.23 | -0.748 | -- | -3.68 | -0.485 | 12.3 | 27.97 | 1123 | -- | -- |
| 96.99 | 0.459 | 11.9 | -0.769 | 1.25 | -1.13 | -- | -- | -0.451 | 12.4 | 28.96 | 1122 | -- | -- |
| 176.15 | 0.618 | 11.9 | -0.848 | -- | -1.67 | -- | -1.16 | -0.19 | -- | 24.95 | 1032 | -- | -- |
| 149.78 | 0.574 | 11.8 | -1.08 | 1.45 | -- | 0.742 | -- | -0.311 | 12.4 | -- | -- | -- | -- |
| 152.14 | 0.578 | 11.8 | -1.05 | 1.45 | -- | -- | -- | -0.308 | 12.4 | -- | -- | -- | -- |
| 176.95 | 0.62 | 11.8 | -0.591 | -- | -1.82 | -- | -- | -0.157 | -- | 24.98 | 1028 | -- | -- |
| 110.84 | 0.49 | 11.9 | -- | 1.18 | -1.37 | -- | -- | -0.281 | 12.6 | 27.4 | 1097 | -- | -- |
| 283.47 | 0.787 | 11.9 | -1.1 | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
| 181.13 | 0.63 | 11.8 | -- | 1.46 | -- | -- | -- | -0.191 | 12.4 | -- | -- | -- | -- |
| 185.55 | 0.634 | 11.8 | -- | -- | -1.96 | -- | -- | -0.0668 | -- | 24.81 | 1032 | -- | -- |
| 315.25 | 0.829 | 11.8 | -- | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.87 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 2 | 87.88 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 3 | 88.68 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 8 | 89.04 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 9 | 89.08 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 24 | 89.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 28 | 89.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 29 | 89.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 35 | 90.01 | wind | 5.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 36 | 90.02 | wind | 7.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 37 | 90.03 | wind | 7.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 76 | 90.65 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 82 | 90.78 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 114 | 91.45 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 165 | 92.25 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 178 | 92.46 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 254 | 93.46 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 289 | 93.79 | temperature | 20.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 300 | 93.84 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 15 |
| 343 | 94.07 | temperature | 20.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 392 | 94.29 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 405 | 94.35 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 408 | 94.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 421 | 94.42 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 447 | 94.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 467 | 94.58 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 11 |
| 544 | 94.83 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 558 | 94.87 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 615 | 95.13 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 646 | 95.21 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 658 | 95.24 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 664 | 95.25 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 668 | 95.26 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 682 | 95.30 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 685 | 95.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 688 | 95.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 692 | 95.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 716 | 95.39 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 721 | 95.40 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 728 | 95.43 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 741 | 95.46 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 750 | 95.47 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 780 | 95.53 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 821 | 95.62 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 21 |
| 824 | 95.63 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 884 | 95.74 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 900 | 95.79 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 909 | 95.80 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 915 | 95.83 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 919 | 95.84 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 931 | 95.86 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 940 | 95.87 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 943 | 95.88 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 950 | 95.89 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 969 | 95.92 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 971 | 95.93 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 998 | 95.96 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 2 |