Os01g0925800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin conjugating enzyme.
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Os01g0925800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin conjugating enzyme.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.48 | 0.207 | 12.9 | -0.647 | 0.52 | -0.55 | 0.323 | -0.415 | 0.107 | 6.99 | 24.18 | 10 | -- | -- |
| 19.75 | 0.209 | 12.9 | -0.701 | 0.523 | -0.5 | 0.344 | -- | 0.0901 | 7.04 | 24.62 | 10 | -- | -- |
| 19.74 | 0.209 | 12.9 | -0.637 | 0.519 | -0.549 | -- | -0.431 | 0.108 | 7 | 24.18 | 10 | -- | -- |
| 20.05 | 0.21 | 12.9 | -0.695 | 0.524 | -0.5 | -- | -- | 0.089 | 7.01 | 24.62 | 10 | -- | -- |
| 33.86 | 0.273 | 12.9 | -0.628 | -- | -0.594 | -- | -0.48 | 0.119 | -- | 23.75 | 5 | -- | -- |
| 23.44 | 0.227 | 12.9 | -0.587 | 0.529 | -- | 0.328 | -- | 0.181 | 7.7 | -- | -- | -- | -- |
| 23.75 | 0.228 | 12.9 | -0.579 | 0.529 | -- | -- | -- | 0.181 | 7.68 | -- | -- | -- | -- |
| 34.23 | 0.272 | 12.9 | -0.689 | -- | -0.535 | -- | -- | 0.104 | -- | 24.04 | 2 | -- | -- |
| 31.66 | 0.263 | 12.9 | -- | 0.517 | -0.241 | -- | -- | 0.212 | 7.47 | 24.11 | 10 | -- | -- |
| 38.84 | 0.291 | 12.9 | -0.572 | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
| 32.57 | 0.267 | 12.9 | -- | 0.525 | -- | -- | -- | 0.245 | 7.76 | -- | -- | -- | -- |
| 45.83 | 0.316 | 12.9 | -- | -- | -0.312 | -- | -- | 0.212 | -- | 23.76 | 2 | -- | -- |
| 47.45 | 0.322 | 12.9 | -- | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.56 | temperature | 25 | 10 | < th | dose dependent | sin | 14 | NA |
| 6 | 17.68 | temperature | 15 | 30 | > th | dose dependent | sin | 12 | NA |
| 18 | 17.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 13 |
| 28 | 17.84 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 9 |
| 51 | 17.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 53 | 17.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 12 |
| 84 | 18.05 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 6 |
| 181 | 18.28 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 4 |
| 201 | 18.33 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 6 |
| 241 | 18.39 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 1 |
| 294 | 18.49 | temperature | 25 | 270 | > th | dose independent | sin | 16 | NA |
| 301 | 18.50 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 10 |
| 320 | 18.54 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 15 |
| 401 | 18.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 445 | 18.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 476 | 18.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 518 | 18.79 | temperature | 25 | 270 | < th | dose independent | sin | 16 | NA |
| 547 | 18.82 | temperature | 25 | 90 | < th | dose independent | sin | 14 | NA |
| 895 | 19.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |