Os01g0819400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein).
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Os01g0819400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.1 | 0.226 | 10.3 | 0.506 | 0.571 | -0.764 | -0.0783 | 1.11 | 0.047 | 5.86 | 25.6 | 4 | -- | -- |
| 23.5 | 0.227 | 10.4 | 0.391 | 0.577 | -0.685 | -0.19 | -- | 0.0168 | 5.73 | 25.6 | 4 | -- | -- |
| 23.05 | 0.225 | 10.3 | 0.512 | 0.57 | -0.788 | -- | 1.21 | 0.0486 | 5.89 | 25.6 | 3 | -- | -- |
| 23.57 | 0.228 | 10.3 | 0.405 | 0.567 | -0.667 | -- | -- | 0.067 | 5.9 | 23.72 | 3 | -- | -- |
| 32.22 | 0.264 | 10.3 | 0.661 | -- | -1.12 | -- | 1.07 | 0.18 | -- | 23.66 | 174 | -- | -- |
| 30.32 | 0.258 | 10.4 | 0.293 | 0.771 | -- | -0.0726 | -- | -0.0188 | 4.93 | -- | -- | -- | -- |
| 30.34 | 0.258 | 10.4 | 0.293 | 0.771 | -- | -- | -- | -0.0184 | 4.94 | -- | -- | -- | -- |
| 33.29 | 0.269 | 10.3 | 0.494 | -- | -1.02 | -- | -- | 0.113 | -- | 23.84 | 174 | -- | -- |
| 27.53 | 0.246 | 10.4 | -- | 0.6 | -0.574 | -- | -- | -0.0114 | 5.65 | 24.86 | 3 | -- | -- |
| 61.63 | 0.367 | 10.4 | 0.321 | -- | -- | -- | -- | 0.00143 | -- | -- | -- | -- | -- |
| 32.6 | 0.267 | 10.4 | -- | 0.776 | -- | -- | -- | -0.051 | 4.93 | -- | -- | -- | -- |
| 39.35 | 0.292 | 10.4 | -- | -- | -0.95 | -- | -- | 0.0453 | -- | 24.1 | 160 | -- | -- |
| 64.34 | 0.374 | 10.4 | -- | -- | -- | -- | -- | -0.0342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 22 | 19.47 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 23 | 19.48 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 27 | 19.56 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 16 |
| 32 | 19.76 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 36 | 19.79 | temperature | 20 | 90 | > th | dose dependent | sin | 2 | NA |
| 46 | 19.95 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 53 | 20.02 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 65 | 20.14 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 72 | 20.23 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 79 | 20.28 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 113 | 20.51 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |
| 136 | 20.69 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 213 | 21.15 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 13 |
| 238 | 21.28 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 9 |
| 282 | 21.47 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 304 | 21.53 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 335 | 21.63 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 11 |
| 404 | 21.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 431 | 21.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 544 | 22.12 | temperature | 25 | 30 | > th | dose dependent | rect. | 21 | 19 |
| 555 | 22.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 617 | 22.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 662 | 22.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 802 | 22.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 841 | 22.67 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 876 | 22.73 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 18 |