Os07g0577400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Constitutive photomorphogenesis protein 10.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0577400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Constitutive photomorphogenesis protein 10.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.82 | 0.348 | 9.22 | 0.00546 | 1.24 | 1.23 | 0.252 | 1.17 | -0.132 | 7.64 | 18.9 | 589 | -- | -- |
| 55.7 | 0.348 | 9.25 | -0.204 | 1.24 | 1.28 | 0.0234 | -- | -0.189 | 7.62 | 19.3 | 577 | -- | -- |
| 54.95 | 0.345 | 9.23 | -0.0254 | 1.24 | 1.24 | -- | 0.986 | -0.144 | 7.59 | 18.7 | 574 | -- | -- |
| 55.63 | 0.347 | 9.25 | -0.22 | 1.26 | 1.29 | -- | -- | -0.199 | 7.45 | 19.26 | 522 | -- | -- |
| 93.84 | 0.451 | 9.25 | -0.0266 | -- | 1.22 | -- | 1.15 | -0.119 | -- | 13.31 | 1428 | -- | -- |
| 84.34 | 0.431 | 9.21 | 0.114 | 0.824 | -- | -0.318 | -- | 0.031 | 7.82 | -- | -- | -- | -- |
| 84.64 | 0.431 | 9.21 | 0.106 | 0.823 | -- | -- | -- | 0.0314 | 7.84 | -- | -- | -- | -- |
| 95.17 | 0.454 | 9.28 | -0.28 | -- | 1.23 | -- | -- | -0.186 | -- | 13.91 | 1428 | -- | -- |
| 56.77 | 0.351 | 9.25 | -- | 1.25 | 1.23 | -- | -- | -0.173 | 7.32 | 19.59 | 476 | -- | -- |
| 121.4 | 0.515 | 9.23 | 0.115 | -- | -- | -- | -- | 0.0427 | -- | -- | -- | -- | -- |
| 84.93 | 0.431 | 9.21 | -- | 0.824 | -- | -- | -- | 0.0197 | 7.83 | -- | -- | -- | -- |
| 96.94 | 0.459 | 9.27 | -- | -- | 1.12 | -- | -- | -0.137 | -- | 10.38 | 1424 | -- | -- |
| 121.75 | 0.515 | 9.23 | -- | -- | -- | -- | -- | 0.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 3 | 53.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 8 |
| 9 | 53.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 16 | 53.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 19 | 53.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 61 | 54.31 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 131 | 55.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 150 | 55.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 162 | 55.29 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 166 | 55.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 170 | 55.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 188 | 55.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 196 | 55.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 214 | 55.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 239 | 55.62 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 243 | 55.64 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 254 | 55.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 255 | 55.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 273 | 55.73 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 275 | 55.73 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 278 | 55.73 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 301 | 55.80 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 308 | 55.81 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 342 | 55.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 358 | 55.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 367 | 55.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 378 | 55.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 402 | 55.98 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 505 | 56.15 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 646 | 56.32 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 657 | 56.33 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 672 | 56.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 673 | 56.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 674 | 56.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 697 | 56.38 | temperature | 25 | 1440 | < th | dose independent | sin | 15 | NA |