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Os06g0660700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19) (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0168) R2 : 0.12
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.279 (0.0353) R2dN8 : 0.156 R2N8 : 0.12
σ : 0.316
deviance : 45.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.65 0.208 11.8 -0.698 0.498 0.699 0.22 -0.335 0.0816 7.23 6.705 1285 -- --
19.74 0.207 11.8 -0.627 0.499 0.7 0.219 -- 0.0989 7.28 5.744 1266 -- --
19.77 0.207 11.8 -0.692 0.501 0.699 -- -0.334 0.0816 7.24 6.294 1263 -- --
19.86 0.208 11.8 -0.62 0.5 0.696 -- -- 0.101 7.24 5.688 1265 -- --
32.73 0.266 11.8 -0.662 -- 0.723 -- -0.216 0.0856 -- 5.365 1358 -- --
27.7 0.247 11.7 -0.411 0.514 -- 0.185 -- 0.225 6.74 -- -- -- --
27.78 0.247 11.7 -0.408 0.515 -- -- -- 0.225 6.72 -- -- -- --
32.77 0.267 11.8 -0.623 -- 0.717 -- -- 0.103 -- 6.389 1360 -- --
28.67 0.249 11.7 -- 0.501 0.433 -- -- 0.208 7.14 8.16 1234 -- --
41.62 0.301 11.7 -0.396 -- -- -- -- 0.235 -- -- -- -- --
32.18 0.265 11.7 -- 0.51 -- -- -- 0.27 6.77 -- -- -- --
41.65 0.301 11.7 -- -- 0.456 -- -- 0.211 -- 11.33 1348 -- --
45.77 0.316 11.7 -- -- -- -- -- 0.279 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.57 temperature 10.0 270 > th dose dependent rect. 2 17
3 16.71 temperature 10.0 270 > th dose dependent rect. 1 20
16 17.61 temperature 10.0 270 > th dose dependent rect. 1 7
18 17.64 temperature 10.0 90 > th dose dependent rect. 3 6
25 17.76 wind 9.0 90 < th dose dependent rect. 3 6
27 17.79 radiation 30.0 90 < th dose independent rect. 3 6
29 17.86 wind 5.0 90 < th dose independent rect. 3 6
30 17.87 precipitation 0.1 90 < th dose independent rect. 3 6
31 17.87 precipitation 0.1 90 < th dose dependent rect. 3 6
34 17.90 humidity 60.0 90 > th dose independent rect. 3 6
38 17.94 temperature 10.0 90 > th dose independent rect. 3 6
42 17.94 atmosphere 995.0 90 > th dose independent rect. 3 6
43 17.94 atmosphere 1015.0 90 < th dose independent rect. 3 6
44 17.94 temperature 10.0 90 > th dose independent rect. 9 18
47 17.98 wind 9.0 90 < th dose independent rect. 9 18
52 18.10 temperature 30.0 90 < th dose independent rect. 3 6
53 18.11 humidity 50.0 90 > th dose dependent rect. 3 6
55 18.14 temperature 10.0 10 > th dose dependent rect. 4 16
58 18.18 temperature 10.0 10 > th dose dependent rect. 4 18
65 18.27 radiation 40.0 90 < th dose dependent rect. 3 6
66 18.31 precipitation 0.1 90 < th dose independent rect. 9 18
67 18.31 precipitation 0.1 90 < th dose dependent rect. 9 18
80 18.49 radiation 20.0 270 < th dose independent rect. 1 7
88 18.54 radiation 40.0 270 < th dose dependent rect. 1 7
93 18.59 temperature 30.0 270 < th dose dependent rect. 7 18
98 18.61 temperature 30.0 90 < th dose dependent rect. 9 18
110 18.70 humidity 70.0 270 > th dose independent rect. 1 7
115 18.76 wind 9.0 270 < th dose dependent rect. 1 6
119 18.79 humidity 50.0 270 > th dose dependent rect. 1 7
122 18.80 wind 5.0 270 < th dose independent rect. 1 6
123 18.81 precipitation 0.1 270 < th dose independent rect. 1 6
124 18.81 precipitation 0.1 270 < th dose dependent rect. 1 6
128 18.82 temperature 30.0 90 < th dose independent rect. 9 18
138 18.85 atmosphere 995.0 90 > th dose independent rect. 9 18
146 18.87 temperature 20.0 270 > th dose independent rect. 2 17
150 18.88 temperature 10.0 270 > th dose independent rect. 1 6
152 18.88 temperature 30.0 270 < th dose independent rect. 1 6
153 18.88 humidity 50.0 270 > th dose independent rect. 1 6
155 18.88 atmosphere 995.0 270 > th dose independent rect. 1 6
156 18.88 atmosphere 1015.0 270 < th dose independent rect. 1 6
158 18.88 temperature 10.0 270 > th dose independent rect. 7 18
171 18.91 wind 9.0 270 < th dose independent rect. 7 18
180 18.95 temperature 10.0 270 > th dose dependent rect. 12 21
182 18.96 temperature 15.0 720 > th dose dependent rect. 21 17
204 19.02 temperature 10.0 270 > th dose dependent rect. 12 9
209 19.02 atmosphere 995.0 90 > th dose dependent rect. 9 18
215 19.04 temperature 10.0 720 > th dose dependent rect. 18 21
233 19.10 precipitation 0.1 270 < th dose independent rect. 7 18
236 19.10 precipitation 0.1 270 < th dose dependent rect. 7 18
255 19.19 temperature 30.0 10 < th dose dependent rect. 9 19
267 19.23 temperature 10.0 270 > th dose dependent rect. 13 18
272 19.28 temperature 10.0 270 > th dose dependent rect. 3 3
275 19.29 temperature 15.0 720 > th dose dependent sin 7 NA
276 19.29 wind 9.0 90 < th dose dependent rect. 9 18
290 19.33 temperature 30.0 720 < th dose dependent rect. 22 15
293 19.33 temperature 30.0 720 < th dose dependent rect. 19 17
302 19.36 humidity 50.0 90 > th dose independent rect. 9 18
306 19.37 temperature 10.0 720 > th dose dependent rect. 18 15
320 19.39 temperature 30.0 720 < th dose dependent sin 8 NA
321 19.39 temperature 30.0 720 < th dose dependent rect. 22 13
356 19.46 atmosphere 1010.0 270 < th dose independent rect. 2 17
373 19.48 humidity 50.0 90 > th dose dependent rect. 19 8
376 19.49 wind 9.0 90 < th dose dependent rect. 19 8
395 19.52 radiation 1.0 270 < th dose dependent rect. 6 20
404 19.54 precipitation 0.1 90 < th dose independent rect. 3 16
410 19.54 precipitation 0.1 90 < th dose dependent rect. 3 16
420 19.55 temperature 15.0 1440 > th dose dependent rect. 14 17
423 19.55 radiation 1.0 270 < th dose dependent rect. 8 18
438 19.56 temperature 10.0 1440 > th dose dependent rect. 5 2
447 19.57 atmosphere 1015.0 270 < th dose independent rect. 12 9
450 19.57 radiation 1.0 270 < th dose dependent rect. 18 8
476 19.59 atmosphere 995.0 270 > th dose independent rect. 7 18
486 19.60 precipitation 0.1 90 < th dose independent rect. 19 8
489 19.60 precipitation 0.1 90 < th dose dependent rect. 19 8
504 19.62 wind 9.0 90 < th dose independent rect. 19 8
505 19.62 temperature 10.0 90 > th dose independent rect. 19 8
506 19.62 temperature 30.0 90 < th dose independent rect. 19 8
508 19.62 humidity 50.0 90 > th dose independent rect. 19 8
510 19.62 atmosphere 995.0 90 > th dose independent rect. 19 8
512 19.62 radiation 1.0 90 < th dose independent rect. 19 8
552 19.64 temperature 10.0 1440 > th dose dependent rect. 4 4
582 19.66 temperature 20.0 270 > th dose independent rect. 12 8
597 19.67 temperature 15.0 1440 > th dose dependent sin 13 NA
614 19.68 wind 9.0 90 < th dose independent rect. 3 16
617 19.68 temperature 30.0 1440 < th dose dependent rect. 5 2
657 19.70 temperature 30.0 1440 < th dose dependent rect. 3 5
711 19.72 temperature 10.0 270 > th dose independent rect. 12 9
712 19.72 temperature 10.0 270 > th dose independent rect. 21 15
713 19.72 atmosphere 995.0 270 > th dose independent rect. 21 15
744 19.73 temperature 10.0 270 > th dose independent rect. 6 8
745 19.73 atmosphere 995.0 270 > th dose independent rect. 6 8
746 19.73 atmosphere 1015.0 270 < th dose independent rect. 6 8
749 19.73 temperature 10.0 270 > th dose independent rect. 14 16
883 19.79 wind 9.0 270 < th dose independent rect. 6 8
885 19.79 wind 9.0 270 < th dose independent rect. 21 15
889 19.79 atmosphere 995.0 90 > th dose dependent rect. 3 6
906 19.80 precipitation 0.1 270 < th dose independent rect. 6 8
909 19.80 temperature 30.0 270 < th dose independent rect. 7 18
917 19.80 precipitation 0.1 270 < th dose dependent rect. 6 8
942 19.81 wind 9.0 270 < th dose independent rect. 14 16