Os09g0293400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein).
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Os09g0293400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.28 | 0.436 | 10.5 | 0.89 | 0.314 | -0.824 | 0.0555 | 0.232 | 0.547 | 21.8 | 22.19 | 1176 | -- | -- |
| 86.32 | 0.433 | 10.5 | 0.904 | 0.312 | -0.882 | 0.0314 | -- | 0.551 | 21.8 | 22.1 | 1181 | -- | -- |
| 86.29 | 0.433 | 10.5 | 0.889 | 0.314 | -0.826 | -- | 0.223 | 0.547 | 21.9 | 22.2 | 1177 | -- | -- |
| 86.33 | 0.433 | 10.5 | 0.91 | 0.314 | -0.882 | -- | -- | 0.551 | 21.9 | 22.08 | 1186 | -- | -- |
| 91.3 | 0.445 | 10.5 | 0.891 | -- | -0.883 | -- | 0.156 | 0.526 | -- | 22.4 | 966 | -- | -- |
| 93.85 | 0.454 | 10.4 | 1.15 | 0.347 | -- | -0.0273 | -- | 0.671 | 22.3 | -- | -- | -- | -- |
| 93.85 | 0.454 | 10.4 | 1.15 | 0.348 | -- | -- | -- | 0.672 | 22.3 | -- | -- | -- | -- |
| 91.3 | 0.445 | 10.4 | 0.903 | -- | -0.922 | -- | -- | 0.538 | -- | 22.39 | 956 | -- | -- |
| 92.27 | 0.447 | 10.5 | -- | 0.339 | -1.03 | -- | -- | 0.342 | 22.2 | 19.6 | 47520 | -- | -- |
| 101.21 | 0.47 | 10.4 | 1.15 | -- | -- | -- | -- | 0.672 | -- | -- | -- | -- | -- |
| 128.52 | 0.53 | 10.5 | -- | 0.354 | -- | -- | -- | 0.544 | 22.5 | -- | -- | -- | -- |
| 99.25 | 0.464 | 10.5 | -- | -- | -1.04 | -- | -- | 0.339 | -- | 19.7 | 47520 | -- | -- |
| 136.23 | 0.545 | 10.4 | -- | -- | -- | -- | -- | 0.545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 3 | 86.28 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 86.31 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 8 | 86.31 | temperature | 20 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 9 | 86.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 14 |
| 23 | 86.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 27 | 86.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 33 | 86.38 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 35 | 86.38 | wind | 1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 62 | 86.44 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 110 | 86.51 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 165 | 86.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 188 | 86.60 | wind | 1 | 30 | < th | dose dependent | rect. | 24 | 5 |
| 207 | 86.62 | temperature | 10 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 210 | 86.63 | temperature | 20 | 1440 | < th | dose dependent | sin | 9 | NA |
| 233 | 86.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 241 | 86.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 261 | 86.70 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 270 | 86.70 | temperature | 20 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 329 | 86.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 338 | 86.78 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 12 |
| 362 | 86.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 392 | 86.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 21 |
| 448 | 86.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 628 | 87.10 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 659 | 87.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 662 | 87.13 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 672 | 87.14 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 8 |
| 686 | 87.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 707 | 87.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 708 | 87.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 722 | 87.18 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 736 | 87.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 750 | 87.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 833 | 87.28 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 875 | 87.31 | temperature | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 895 | 87.33 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 10 |
| 902 | 87.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 931 | 87.36 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 943 | 87.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 987 | 87.40 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 990 | 87.40 | wind | 1 | 30 | < th | dose independent | rect. | 24 | 5 |