Os05g0557600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
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Os05g0557600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.94 | 0.175 | 10.7 | 0.00549 | 0.631 | -0.546 | 0.0304 | 1.17 | 0.124 | 1.01 | 24.9 | 3900 | -- | -- |
| 14.33 | 0.176 | 10.7 | 0.295 | 0.686 | -0.42 | 0.0961 | -- | 0.144 | 0.792 | 23 | 3197 | -- | -- |
| 13.95 | 0.174 | 10.7 | 0.00689 | 0.631 | -0.547 | -- | 1.15 | 0.123 | 1.02 | 24.91 | 3876 | -- | -- |
| 14.23 | 0.176 | 10.7 | 0.303 | 0.675 | -0.424 | -- | -- | 0.14 | 0.927 | 22.99 | 3266 | -- | -- |
| 37.85 | 0.287 | 10.8 | -0.0742 | -- | -0.689 | -- | 1.29 | 0.0935 | -- | 25.29 | 3853 | -- | -- |
| 20.75 | 0.214 | 10.7 | 0.501 | 0.696 | -- | -0.0256 | -- | 0.317 | 0.899 | -- | -- | -- | -- |
| 20.75 | 0.213 | 10.7 | 0.502 | 0.696 | -- | -- | -- | 0.317 | 0.901 | -- | -- | -- | -- |
| 34.15 | 0.272 | 10.8 | 0.316 | -- | -0.527 | -- | -- | 0.0727 | -- | 24.83 | 954 | -- | -- |
| 15.31 | 0.182 | 10.7 | -- | 0.681 | -0.592 | -- | -- | 0.077 | 0.841 | 21.5 | 4308 | -- | -- |
| 50.93 | 0.333 | 10.7 | 0.527 | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
| 27.39 | 0.245 | 10.7 | -- | 0.704 | -- | -- | -- | 0.261 | 0.932 | -- | -- | -- | -- |
| 33.96 | 0.271 | 10.7 | -- | -- | -0.772 | -- | -- | 0.0207 | -- | 24.95 | 980 | -- | -- |
| 58.27 | 0.356 | 10.7 | -- | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 13.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 15 |
| 4 | 13.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 5 |
| 24 | 13.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 39 | 13.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 79 | 13.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 89 | 13.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 3 |
| 304 | 13.89 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 318 | 13.90 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 343 | 13.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 14 |
| 344 | 13.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 18 |
| 367 | 13.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 405 | 13.96 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 17 |
| 415 | 13.96 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 431 | 13.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 13 | 13 |
| 457 | 13.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 482 | 14.00 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 512 | 14.02 | temperature | 25 | 4320 | < th | dose independent | sin | 16 | NA |
| 553 | 14.04 | temperature | 25 | 4320 | > th | dose independent | sin | 16 | NA |
| 961 | 14.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 17 |