BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0557600 Os05g0557600|AK121717
(509 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain contai... 897 0.0
Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain contai... 475 e-134
Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 366 e-101
Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 350 2e-96
Os01g0677500 338 4e-93
Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain contai... 310 2e-84
Os01g0125900 Ubiquitin-conjugating enzyme, E2 domain contai... 289 4e-78
Os05g0153100 241 6e-64
Os01g0229900 Similar to Shaggy-related protein kinase dzeta... 122 8e-28
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 69 1e-11
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 69 1e-11
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 68 2e-11
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 67 4e-11
>Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 509
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/509 (86%), Positives = 441/509 (86%)
Query: 1 MATHAPKGYLCAGSSSFDDPDVVEVTPXXXXXXXWSSGHQKRKRSQVVPHEVIELDADDD 60
MATHAPKGYLCAGSSSFDDPDVVEVTP WSSGHQKRKRSQVVPHEVIELDADDD
Sbjct: 1 MATHAPKGYLCAGSSSFDDPDVVEVTPAAAAAGGWSSGHQKRKRSQVVPHEVIELDADDD 60
Query: 61 PDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSKNPDILLGGLKIFQ 120
PDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSKNPDILLGGLKIFQ
Sbjct: 61 PDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSKNPDILLGGLKIFQ 120
Query: 121 ENPFYNNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFTLASKFDGLDIPPGVEA 180
ENPFYNNI NFTLASKFDGLDIPPGVEA
Sbjct: 121 ENPFYNNIDDYAYEAFEEDYGYDEDEYDDYDYDSTLYESEYNFTLASKFDGLDIPPGVEA 180
Query: 181 PLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKK 240
PLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKK
Sbjct: 181 PLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKK 240
Query: 241 PSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFP 300
PSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFP
Sbjct: 241 PSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFP 300
Query: 301 PHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMXXXXXXXX 360
PHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTM
Sbjct: 301 PHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMLQVLVSVQ 360
Query: 361 XXXXNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTMLYSLRNPPKHFEDFIAG 420
NAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTMLYSLRNPPKHFEDFIAG
Sbjct: 361 ALVLNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTMLYSLRNPPKHFEDFIAG 420
Query: 421 HFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARFKSALKRLFEELLMEFT 480
HFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARFKSALKRLFEELLMEFT
Sbjct: 421 HFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARFKSALKRLFEELLMEFT 480
Query: 481 VKGAECDXXXXXXXXXXXXXXXXDTTLRL 509
VKGAECD DTTLRL
Sbjct: 481 VKGAECDKFLAEKAKAAASRAPADTTLRL 509
>Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 433
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/345 (67%), Positives = 251/345 (72%), Gaps = 1/345 (0%)
Query: 165 LASKFDGLDIPPGVEAPLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSD 224
LA G PG LPW TT K K + +D+KIDEKY AFKQFDTV DHSD
Sbjct: 90 LAEDVPGPSHQPGTSTVLPWGCTTPGR-PRKHKEIKTVDNKIDEKYKAFKQFDTVTDHSD 148
Query: 225 HYYSKPDLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPA 284
HYYS V VKKPSK+W +RIQHEWKVLEKDLP TIFVR YEDRM+LLRAVI GPA
Sbjct: 149 HYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPA 208
Query: 285 GTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCER 344
GTPYHDGLFFFD+YFP YP PPLVNYRSGGLRLNPNLY GKVCLSLLNTWSG GCE+
Sbjct: 209 GTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEK 268
Query: 345 WSPSNSTMXXXXXXXXXXXXNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTML 404
W+PSNSTM NAKPYFNEPGYA ANTP GEK S+ YNE TFLLSCRTML
Sbjct: 269 WNPSNSTMLQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTML 328
Query: 405 YSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARF 464
YSLRNPPKHFEDF HF KYG++IL+ C+AY++GAQVGCL GNGVQDVDEGDKSCSA F
Sbjct: 329 YSLRNPPKHFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNGVQDVDEGDKSCSANF 388
Query: 465 KSALKRLFEELLMEFTVKGAECDXXXXXXXXXXXXXXXXDTTLRL 509
K +LK LF+EL+ EFT G C DTTLRL
Sbjct: 389 KGSLKTLFDELIKEFTRIGVHCHEFQPQRVNPGSTRAKADTTLRL 433
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
Query: 13 GSSS----FDDPDVVEVTPXXXXXXXWSSGHQKRKRSQVVPHEVIELDADDDPDGVVIIG 68
GSSS DPDVVEV+P WSS KRKR+ V HE+I+LDA+DDPDGV+II
Sbjct: 6 GSSSRRWALGDPDVVEVSPEAAAAARWSSARLKRKRTTVA-HEIIDLDANDDPDGVMIIC 64
Query: 69 EKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYP 105
EK+S K+ +V +P DW KH KS LA ++ GPS P
Sbjct: 65 EKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQP 101
>Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 467
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 231/350 (66%), Gaps = 33/350 (9%)
Query: 162 NFTLASKFDGLDIPPGVEAPLPWLQTT-AAEMANKTKPVNMMDDKIDEKYSAFKQFDTVD 220
N LA KFDGLD+PPGVEA +PWLQ A+ + K + +D I +KY FKQFD V+
Sbjct: 105 NQQLADKFDGLDLPPGVEATVPWLQKKDIADGPSTFKSMAELDADITKKYEFFKQFDVVE 164
Query: 221 DHSDHYYS-KPDLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAV 279
+ SDH+Y+ KP V K K+W KRIQ++WK+LEKDLP +I+VR E+RMDLLRAV
Sbjct: 165 NFSDHHYADKP-------VGKTGKDWTKRIQYDWKLLEKDLPASIYVRVSENRMDLLRAV 217
Query: 280 ITGPAGTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSG 339
I GP GTPYHDGLFFFD F YPS PP+V Y SGGLRLNPNLYACGKVCLSLL TWSG
Sbjct: 218 IIGPQGTPYHDGLFFFDAQFTSTYPSTPPVVYYHSGGLRLNPNLYACGKVCLSLLGTWSG 277
Query: 340 SGCERWSPSNSTMXXXXXXXXXXXXNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLS 399
SGCE+W+ ++STM N PYFNEPGY +AN+ G+KS++ YN+ TF S
Sbjct: 278 SGCEKWNSAHSTMLQVLVSIQALVLNENPYFNEPGYETYANSATGQKSAMDYNDTTFQYS 337
Query: 400 CRTMLYSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGN-GVQDVDEGD- 457
CRTMLYSLR P+HF+ +AGHFR G +IL AC+ Y++G +VG +V N +D + D
Sbjct: 338 CRTMLYSLRRSPQHFDALVAGHFRHRGHAILAACKYYMEGHKVGSVVPNEDEEDAKQQDD 397
Query: 458 ----------------------KSCSARFKSALKRLFEELLMEFTVKGAE 485
K +A FK+ + LFEELLMEF VKGA+
Sbjct: 398 TDAGGSGSSSGAKPQPEKPDLCKGRAASFKTNMAVLFEELLMEFNVKGAD 447
>Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 485
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/356 (51%), Positives = 224/356 (62%), Gaps = 40/356 (11%)
Query: 162 NFTLASKFDGLDIPPGVEAPLPWLQTTAAEMANKTKPVNMMDDKIDE---KYSAFKQFDT 218
N LA KFD LD+PPGVEA +PWLQ + + + D+ ++ K FKQFDT
Sbjct: 104 NQRLADKFDDLDLPPGVEATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDT 163
Query: 219 VDDHSDHYYSKP--DLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLL 276
V + SDH+Y+ D+ K ++W KRIQH+WK+LEKDLP +I+VR EDRMDLL
Sbjct: 164 VKNFSDHHYAATSGDVTK--------RDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLL 215
Query: 277 RAVITGPAGTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNT 336
RA I GP GTPYHDGLFFFDI F YP+ PP V Y SGGLR+NPNLY GKVCLSLL T
Sbjct: 216 RAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGT 275
Query: 337 WSGSGCERWSPSNSTMXXXXXXXXXXXXNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTF 396
W+GSGCE W+PS STM N KPYFNEPGYA +AN+ GE+ ++ YN++TF
Sbjct: 276 WAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTF 335
Query: 397 LLSCRTMLYSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEG 456
L SCRTMLYSLR PP+HF D + HFR+ G +IL ACR Y++G +VG +V ++ + G
Sbjct: 336 LHSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYMEGHKVGSVVPE-EKEPEYG 394
Query: 457 DK------------------------SCSAR--FKSALKRLFEELLMEFTVKGAEC 486
D S S R F LK LFEELLMEF VKGA+
Sbjct: 395 DAGASTSSASASAAAAALKPRPDKVDSVSRRPTFNDNLKTLFEELLMEFNVKGADT 450
>Os01g0677500
Length = 389
Score = 338 bits (868), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Query: 188 TAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKKPSKEWAK 247
T+AE ++ K + +D KIDEKY FKQFD V DHSDH+YS P RKVQVV +P K+W K
Sbjct: 158 TSAEKPHQHKQMKHVDPKIDEKYVEFKQFDIVGDHSDHFYSNPRERKVQVVNEPGKDWVK 217
Query: 248 RIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPSVP 307
RIQHEWKVLEKDLPD IFVR YEDR++LLRAVI GP+GTPYHDGLFFFD+YFPP YP P
Sbjct: 218 RIQHEWKVLEKDLPDNIFVRVYEDRLELLRAVIIGPSGTPYHDGLFFFDVYFPPQYPRNP 277
Query: 308 PLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMXXXXXXXXXXXXNAK 367
LV Y SGG+RLNPNLYACGKVCLSLLNTW G GCE+W+PSNST+ NAK
Sbjct: 278 LLVIYHSGGMRLNPNLYACGKVCLSLLNTWPGDGCEKWNPSNSTL-QVLVSIQALVLNAK 336
Query: 368 PYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTMLYSLRNPPK 412
PYFNEPG+ +ANTP EK S+ YN++TFLLSC+TMLYSLRNPPK
Sbjct: 337 PYFNEPGFESYANTPRAEKKSIAYNQETFLLSCKTMLYSLRNPPK 381
>Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 374
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/267 (57%), Positives = 183/267 (68%), Gaps = 8/267 (2%)
Query: 210 YSAFKQFDTVDDHSDHYYSKPDLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAY 269
Y+ F QFD V D SDHYY+K K SK+W K IQ+EWK+L+KDLP++I+VRAY
Sbjct: 85 YNLFNQFDVVQDFSDHYYAK------NSPGKTSKDWVKTIQNEWKLLQKDLPESIYVRAY 138
Query: 270 EDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKV 329
EDR+DLLRA I GPAGTPYHDGLFFFD+ FP YP PP V+Y SGGLRLNPNLY GKV
Sbjct: 139 EDRIDLLRAAIVGPAGTPYHDGLFFFDVRFPSEYPQSPPKVHYHSGGLRLNPNLYESGKV 198
Query: 330 CLSLLNTWSGSGCERWSPSNSTMXXXXXXXXXXXXNAKPYFNEPGYAMHANTPHGEKSSL 389
CLSLLNTW G+GCE+W S ST+ N KPYFNEPG ANT GEK SL
Sbjct: 199 CLSLLNTWWGTGCEKWGKSKSTILQVLVSIQGLVLNDKPYFNEPGNKNSANTAPGEKYSL 258
Query: 390 TYNEDTFLLSCRTMLYSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGNG 449
YN+ FLLSCRTM+YSLR PPKHFE +A HF + + IL AC AY+ GA VG G
Sbjct: 259 AYNQTAFLLSCRTMMYSLRKPPKHFESLVARHFHERERVILDACDAYISGAVVGSSSAKG 318
Query: 450 VQDVDEGDKSCSARFKSALKRLFEELL 476
+ + ++S A FK +L++ + ELL
Sbjct: 319 TKHPRDNNRSF-ADFKKSLEK-YSELL 343
>Os01g0125900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 1063
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 178/301 (59%), Gaps = 7/301 (2%)
Query: 187 TTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKKPSKEWA 246
TT K+ V+M D D FK FD DH+Y + ++W
Sbjct: 756 TTNDASGGKSVDVDMADKPGDS--DGFKHFDVQQCPPDHHYLEN-----MAQGTGGRKWV 808
Query: 247 KRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPSV 306
K++Q EW +LEK+LPD I+VR +EDRMDL+RAVI G +GTPY DGLFFFD + PP +P V
Sbjct: 809 KKVQQEWNILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFDFHLPPEFPQV 868
Query: 307 PPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMXXXXXXXXXXXXNA 366
PP Y SGGLR+NPNLY GKVCLSLLNTW+G G E W PS+S++ N
Sbjct: 869 PPSAYYHSGGLRVNPNLYVDGKVCLSLLNTWTGRGNEVWDPSSSSILQVLVSLQGLVLNE 928
Query: 367 KPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTMLYSLRNPPKHFEDFIAGHFRKYG 426
KPYFNE GY T GEK++L YNE+T+LLS ++MLY LR PP HFEDF HF K G
Sbjct: 929 KPYFNEAGYEKQVGTVEGEKNALPYNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRG 988
Query: 427 QSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARFKSALKRLFEELLMEFTVKGAEC 486
+ IL AC AYL G VG L + ++ CS FK AL ++ L+ GA C
Sbjct: 989 KYILKACEAYLQGNGVGTLTDDACTTERSKEQPCSVGFKLALAKIMPRLITALKDAGANC 1048
Query: 487 D 487
D
Sbjct: 1049 D 1049
>Os05g0153100
Length = 1045
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 165/283 (58%), Gaps = 9/283 (3%)
Query: 204 DKIDEKYSAFKQFDTVDDHSDHYYSKPDLRKVQVVKKPSKEWAKRIQHEWKVLEKD-LPD 262
+K+++ FD V DH++ L +W KR+Q EW++L D LP
Sbjct: 742 EKVEDDSLGVAHFDVVQCPPDHHFLDCKLEGA----AHGNKWVKRVQKEWQILGNDNLPG 797
Query: 263 TIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPN 322
TI+VRA+EDRMDLLRA + G AG+PYHDGLF FD++ P YP+ PP V Y S GLR+NPN
Sbjct: 798 TIYVRAFEDRMDLLRAAMVGAAGSPYHDGLFLFDLHLPATYPAAPPEVYYHSFGLRVNPN 857
Query: 323 LYACGKVCLSLLNTWSGSGCERWSPSNSTMXXXXXXXXXXXXNAKPYFNEPGYAMHANTP 382
LY G VCLSLLNT+ G G E WSP+ ST+ A PY+NE GY +A TP
Sbjct: 858 LYPSGTVCLSLLNTFDGEGVEVWSPARSTLLQVLVSIQGLVLTADPYYNEAGYDAYAGTP 917
Query: 383 HGEKSSLTYNEDTFLLSCRTMLYSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQV 442
G +++ +Y E+ LL+ R+ L+ LR PP+ FE + HFR+ G +L AC +YL G +
Sbjct: 918 GGRRNAASYAENACLLTLRSALHLLRRPPRGFEGVVGAHFRRRGAHVLAACESYLRGTR- 976
Query: 443 GCLVGNGVQDVDEGDKSCSARFKSALKRLFEELLMEFTVKGAE 485
V D G+++CSA F+ AL+ + L F G E
Sbjct: 977 ---VAGDGGDGGGGERTCSAGFRLALRNVVPVLAAAFAEIGVE 1016
>Os01g0229900 Similar to Shaggy-related protein kinase dzeta (EC 2.7.1.-)
(ASK-dzeta)
Length = 258
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 77/112 (68%), Gaps = 15/112 (13%)
Query: 211 SAFKQFDTVDDHSDHYYSKPDLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYE 270
++F FD V D SDHYY+K K SK+W K IQ+EW++L+KDLP++I+VR YE
Sbjct: 134 NSFSHFD-VQDFSDHYYAK------NSPGKTSKDWVKTIQNEWRLLQKDLPESIYVRVYE 186
Query: 271 DRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPS--------VPPLVNYRS 314
DR+DLLRA I GPA TPYHDGLFFFD++FP YP +P L++Y S
Sbjct: 187 DRIDLLRAAIVGPAETPYHDGLFFFDVHFPSEYPQSHRLTHVHIPSLMSYES 238
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 246 AKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPS 305
+KRIQ E L KD P + + + +A I GP+ +PY G+FF +I+FPP YP
Sbjct: 3 SKRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPF 62
Query: 306 VPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPS 348
PP VN+++ +PN+ + G +CL +L E+WSP+
Sbjct: 63 KPPKVNFQTK--VYHPNINSNGSICLDILK-------EQWSPA 96
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 246 AKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPS 305
+KRIQ E K L+KD P + + M +A I GP+ +PY G+F I+FPP YP
Sbjct: 3 SKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPF 62
Query: 306 VPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPS 348
PP V +R+ +PN+ + G +CL +L ++WSP+
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDILK-------DQWSPA 96
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 246 AKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPS 305
+KRI E K L+KD P + + M +A I GP+ +P+ G+F +I+FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPF 62
Query: 306 VPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPS 348
PP V++R+ +PN+ + G +CL +L E+WSP+
Sbjct: 63 KPPKVSFRTK--VFHPNINSNGSICLDILK-------EQWSPA 96
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 246 AKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPS 305
+KRI E K L+KD P + + M +A I GP +PY G+F +I+FPP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPF 62
Query: 306 VPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPS 348
PP V++++ +PN+ + G +CL +L E+WSP+
Sbjct: 63 KPPKVSFKTK--VFHPNINSNGSICLDILK-------EQWSPA 96
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,404,819
Number of extensions: 741092
Number of successful extensions: 1512
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1506
Number of HSP's successfully gapped: 15
Length of query: 509
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 404
Effective length of database: 11,553,331
Effective search space: 4667545724
Effective search space used: 4667545724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)