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Os01g0232500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0175) R2 : 0.337
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.576 (0.0437) R2dC : 0.253 R2C : 0.237
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.268 (0.0368) R2dN8 : 0.0999 R2N8 : 0.0844
σ : 0.33
deviance : 49.63
__
_____
C
peak time of C : 3.13
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.81 0.285 11.1 0.377 0.547 0.347 0.589 -0.0952 0.231 2.98 20.67 2932 -- --
36.82 0.283 11.1 0.389 0.549 0.369 0.589 -- 0.234 2.99 20.7 2935 -- --
37.87 0.287 11.1 0.403 0.549 0.337 -- -0.008 0.231 3.15 21.3 2831 -- --
37.87 0.287 11.1 0.405 0.549 0.338 -- -- 0.231 3.15 21.28 2831 -- --
54.57 0.344 11.1 0.407 -- 0.402 -- 0.0222 0.223 -- 21.3 2588 -- --
39.68 0.295 11 0.595 0.56 -- 0.557 -- 0.336 2.98 -- -- -- --
40.7 0.299 11 0.582 0.564 -- -- -- 0.333 3.13 -- -- -- --
53.61 0.341 11.1 0.48 -- 0.382 -- -- 0.207 -- 24.78 1100 -- --
39.18 0.292 11.1 -- 0.565 0.574 -- -- 0.158 3.11 17.82 21808 -- --
58.85 0.358 11 0.606 -- -- -- -- 0.348 -- -- -- -- --
49.63 0.33 11 -- 0.576 -- -- -- 0.268 3.13 -- -- -- --
57.11 0.352 11.1 -- -- 0.569 -- -- 0.168 -- 16.92 47520 -- --
68.55 0.386 11 -- -- -- -- -- 0.28 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.13 radiation 20 720 > th dose independent rect. 16 1
16 35.75 wind 1 4320 < th dose dependent rect. 6 1
17 35.92 radiation 20 1440 < th dose dependent rect. 11 1
18 35.95 radiation 10 1440 > th dose independent rect. 11 1
19 36.01 radiation 10 720 > th dose dependent rect. 16 1
20 36.05 radiation 30 720 > th dose independent rect. 15 17
21 36.06 radiation 10 720 < th dose independent rect. 17 8
22 36.06 radiation 1 720 > th dose dependent rect. 16 14
23 36.12 temperature 20 10 > th dose independent rect. 19 14
38 36.19 temperature 20 90 < th dose independent rect. 23 6
55 36.24 temperature 20 1440 > th dose independent rect. 5 2
56 36.24 temperature 20 90 < th dose independent rect. 19 10
57 36.25 temperature 20 1440 > th dose independent rect. 3 1
77 36.28 temperature 20 10 < th dose independent sin 11 NA
78 36.28 temperature 20 1440 < th dose independent rect. 3 1
79 36.28 temperature 20 10 < th dose independent rect. 18 11
82 36.30 temperature 20 90 < th dose independent rect. 21 8
86 36.32 temperature 20 10 < th dose independent rect. 22 7
87 36.33 temperature 20 1440 < th dose independent rect. 1 3
88 36.33 temperature 20 1440 > th dose independent rect. 24 7
97 36.34 temperature 20 1440 < th dose independent rect. 24 7
107 36.35 temperature 20 90 < th dose independent rect. 15 14
115 36.37 temperature 20 10 > th dose independent sin 9 NA
123 36.37 radiation 20 720 < th dose dependent rect. 17 8
124 36.38 temperature 20 1440 < th dose independent rect. 5 2
134 36.39 temperature 20 10 < th dose independent rect. 15 14
194 36.45 temperature 20 10 < th dose independent rect. 18 14
254 36.52 humidity 70 1440 > th dose independent rect. 11 1
255 36.52 radiation 20 1440 < th dose independent rect. 11 1
269 36.53 temperature 30 10 < th dose dependent rect. 22 8
281 36.54 temperature 20 10 < th dose independent rect. 14 18
287 36.55 temperature 20 10 < th dose independent rect. 22 10
296 36.55 temperature 30 1440 < th dose dependent rect. 4 1
297 36.55 temperature 15 1440 > th dose dependent rect. 3 2
313 36.57 temperature 20 10 > th dose independent rect. 23 10
318 36.58 temperature 20 270 < th dose independent rect. 23 2
351 36.59 temperature 30 10 < th dose dependent rect. 20 10
364 36.61 atmosphere 1005 270 > th dose independent sin 14 NA
390 36.64 temperature 20 4320 > th dose independent rect. 20 3
408 36.65 temperature 20 10 > th dose independent rect. 6 23
409 36.65 radiation 10 1440 < th dose dependent rect. 13 1
412 36.65 radiation 10 1440 < th dose dependent rect. 9 7
413 36.65 radiation 10 720 < th dose dependent rect. 9 16
453 36.69 temperature 10 270 > th dose dependent sin 12 NA
454 36.69 temperature 30 10 < th dose dependent sin 11 NA
463 36.69 temperature 25 90 < th dose dependent rect. 23 6
497 36.71 atmosphere 1005 270 < th dose independent rect. 15 17
502 36.71 radiation 10 1440 < th dose dependent rect. 11 3
518 36.73 temperature 20 4320 < th dose independent rect. 20 3
523 36.73 temperature 20 10 > th dose independent rect. 23 23
527 36.73 temperature 15 270 > th dose dependent rect. 16 16
528 36.74 radiation 10 720 < th dose independent sin 17 NA
542 36.74 temperature 30 270 < th dose dependent rect. 19 9
548 36.75 temperature 20 1440 > th dose dependent rect. 24 1
556 36.76 temperature 20 270 > th dose independent rect. 15 17
565 36.76 temperature 30 10 < th dose dependent rect. 16 14
586 36.77 temperature 30 270 < th dose dependent rect. 17 11
600 36.78 radiation 1 1440 > th dose dependent rect. 11 1
607 36.79 temperature 20 1440 > th dose independent sin 9 NA
625 36.79 temperature 30 1440 < th dose dependent rect. 24 1
644 36.81 humidity 80 1440 < th dose independent rect. 8 6
645 36.81 temperature 20 90 > th dose independent rect. 23 10
652 36.81 radiation 10 1440 < th dose dependent sin 21 NA
667 36.82 radiation 10 720 < th dose independent rect. 11 15
676 36.82 radiation 10 1440 < th dose dependent rect. 8 13
680 36.83 temperature 20 1440 < th dose independent sin 9 NA
693 36.83 radiation 10 1440 < th dose dependent rect. 11 5
699 36.83 temperature 30 10 < th dose dependent rect. 14 16
703 36.84 humidity 80 1440 > th dose independent rect. 8 6
706 36.84 temperature 20 10 > th dose independent rect. 21 12
762 36.86 wind 7 1440 < th dose independent rect. 5 1
764 36.86 temperature 10 1440 > th dose independent rect. 5 1
767 36.86 temperature 30 1440 < th dose independent rect. 5 1
771 36.86 humidity 50 1440 > th dose independent rect. 5 1
780 36.86 atmosphere 995 1440 > th dose independent rect. 5 1
781 36.86 atmosphere 1015 1440 < th dose independent rect. 5 1
782 36.86 radiation 20 1440 < th dose independent rect. 5 1
798 36.86 temperature 10 1440 > th dose independent rect. 6 23
824 36.87 atmosphere 1005 270 > th dose independent rect. 16 11
828 36.87 humidity 50 1440 < th dose dependent rect. 16 1
838 36.88 humidity 80 270 > th dose independent sin 3 NA
839 36.88 humidity 50 1440 < th dose independent rect. 16 1
850 36.88 radiation 30 4320 < th dose independent rect. 15 17
858 36.88 radiation 10 720 < th dose dependent rect. 13 12
908 36.90 temperature 30 4320 < th dose independent rect. 14 2
931 36.91 temperature 30 4320 > th dose independent rect. 14 1
958 36.92 radiation 10 1440 > th dose independent rect. 8 5
961 36.92 temperature 25 10 > th dose independent rect. 1 8
967 36.92 humidity 80 1440 > th dose independent rect. 1 14
976 36.92 temperature 15 90 > th dose dependent rect. 18 14
977 36.92 radiation 40 10 < th dose dependent rect. 6 16
981 36.93 wind 1 4320 < th dose independent rect. 6 1
993 36.93 wind 3 1440 < th dose dependent rect. 8 1