BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0232500 Os01g0232500|AK067926
(485 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 796 0.0
Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 487 e-138
Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain contai... 375 e-104
Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain contai... 347 2e-95
Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain contai... 330 2e-90
Os01g0125900 Ubiquitin-conjugating enzyme, E2 domain contai... 300 2e-81
Os01g0677500 276 2e-74
Os05g0153100 258 5e-69
Os01g0229900 Similar to Shaggy-related protein kinase dzeta... 127 2e-29
Os07g0166800 Rad6 (Ubiquitin carrier protein) 73 4e-13
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 72 7e-13
Os05g0182500 Rad6 (Ubiquitin carrier protein) 72 8e-13
Os03g0791800 Rad6 (Ubiquitin carrier protein) 72 9e-13
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 72 1e-12
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 71 2e-12
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 71 2e-12
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 69 7e-12
>Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 485
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/485 (81%), Positives = 397/485 (81%)
Query: 1 MDFGYVGVGQGXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXDDQVGLSTSNSLQM 60
MDFGYVGVGQG W DDQVGLSTSNSLQM
Sbjct: 1 MDFGYVGVGQGSSSSSSSASCRAADVAAWGSSTQQQQKRQRCQGSSDDQVGLSTSNSLQM 60
Query: 61 SEPEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLADKFDDLDLPPGV 120
SEPEPR QRLADKFDDLDLPPGV
Sbjct: 61 SEPEPRDFDNGENEEEDYYLDEDDCIYDDGDGYDYEFDGGDYFNQRLADKFDDLDLPPGV 120
Query: 121 EATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHHYAATSGDVT 180
EATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHHYAATSGDVT
Sbjct: 121 EATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHHYAATSGDVT 180
Query: 181 KRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSN 240
KRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSN
Sbjct: 181 KRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSN 240
Query: 241 SYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQA 300
SYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQA
Sbjct: 241 SYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQA 300
Query: 301 LILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSH 360
LILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSH
Sbjct: 301 LILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSH 360
Query: 361 FRERGHTILAACRYYMEGHKVGSVVPEEKEPEYGDXXXXXXXXXXXXXXXXLKPRPDKVD 420
FRERGHTILAACRYYMEGHKVGSVVPEEKEPEYGD LKPRPDKVD
Sbjct: 361 FRERGHTILAACRYYMEGHKVGSVVPEEKEPEYGDAGASTSSASASAAAAALKPRPDKVD 420
Query: 421 SVSRRPTFNDNLKTLFEELLMEFNVKGADTAKFLAEKVKKSSGATTTAPVGGARYAAEVV 480
SVSRRPTFNDNLKTLFEELLMEFNVKGADTAKFLAEKVKKSSGATTTAPVGGARYAAEVV
Sbjct: 421 SVSRRPTFNDNLKTLFEELLMEFNVKGADTAKFLAEKVKKSSGATTTAPVGGARYAAEVV 480
Query: 481 DEWMD 485
DEWMD
Sbjct: 481 DEWMD 485
>Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 467
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/416 (59%), Positives = 283/416 (68%), Gaps = 6/416 (1%)
Query: 47 DDQVGLSTSNSLQMSEPEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQR 106
+DQVGLST N+ PEP Q+
Sbjct: 49 NDQVGLSTENN-SFQAPEPELQNSDCVEDEEEDYYLYDEDDVCYDDDGDYEFDETDFNQQ 107
Query: 107 LADKFDDLDLPPGVEATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKN 166
LADKFD LDLPPGVEATVPWLQK + S+ K E ++ K + FKQFD V+N
Sbjct: 108 LADKFDGLDLPPGVEATVPWLQKKDIADGPSTFKSMAELDA--DITKKYEFFKQFDVVEN 165
Query: 167 FSDHHYAATSGDVTKRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTP 226
FSDHHYA T +DW KRIQ+DWKLLEKDLPASIYVRV+E+RMDLLRA IIGP+GTP
Sbjct: 166 FSDHHYADKPVGKTGKDWTKRIQYDWKLLEKDLPASIYVRVSENRMDLLRAVIIGPQGTP 225
Query: 227 YHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNP 286
YHDGLFFFD QF+++YP+ PP VYYHSGGLR+NPNLY GKVCLSLLGTW+GSGCE WN
Sbjct: 226 YHDGLFFFDAQFTSTYPSTPPVVYYHSGGLRLNPNLYACGKVCLSLLGTWSGSGCEKWNS 285
Query: 287 SQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSL 346
+ STMLQVLVSIQAL+LNE PYFNEPGY +YANS +G++ AM+YND TF +SCRTMLYSL
Sbjct: 286 AHSTMLQVLVSIQALVLNENPYFNEPGYETYANSATGQKSAMDYNDTTFQYSCRTMLYSL 345
Query: 347 RRPPEHFADLVTSHFRERGHTILAACRYYMEGHKVGSVVPEEKEPEYGDXXXXXXXXXXX 406
RR P+HF LV HFR RGH ILAAC+YYMEGHKVGSVVP E E +
Sbjct: 346 RRSPQHFDALVAGHFRHRGHAILAACKYYMEGHKVGSVVPNEDEEDA--KQQDDTDAGGS 403
Query: 407 XXXXXLKPRPDKVD-SVSRRPTFNDNLKTLFEELLMEFNVKGADTAKFLAEKVKKS 461
KP+P+K D R +F N+ LFEELLMEFNVKGADT KF EK+KK+
Sbjct: 404 GSSSGAKPQPEKPDLCKGRAASFKTNMAVLFEELLMEFNVKGADTKKFCDEKLKKN 459
>Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 509
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/353 (54%), Positives = 235/353 (66%), Gaps = 40/353 (11%)
Query: 107 LADKFDDLDLPPGVEATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKN 166
LA KFD LD+PPGVEA +PWLQ + + + D+ ++ K FKQFDTV +
Sbjct: 165 LASKFDGLDIPPGVEAPLPWLQTTAAEMANKTKPVNMMDDKIDE---KYSAFKQFDTVDD 221
Query: 167 FSDHHYAATSGDVTK--------RDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAA 218
SDH+Y+ D+ K ++W KRIQH+WK+LEKDLP +I+VR EDRMDLLRA
Sbjct: 222 HSDHYYSKP--DLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAV 279
Query: 219 IIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAG 278
I GP GTPYHDGLFFFDI F YP+ PP V Y SGGLR+NPNLY GKVCLSLL TW+G
Sbjct: 280 ITGPAGTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSG 339
Query: 279 SGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHS 338
SGCE W+PS STMLQVLVS+QAL+LN KPYFNEPGYA +AN+ GE+ ++ YN++TFL S
Sbjct: 340 SGCERWSPSNSTMLQVLVSVQALVLNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLS 399
Query: 339 CRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYMEGHKVGSVVPEE-KEPEYGDXX 397
CRTMLYSLR PP+HF D + HFR+ G +IL ACR Y++G +VG +V ++ + GD
Sbjct: 400 CRTMLYSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDK- 458
Query: 398 XXXXXXXXXXXXXXLKPRPDKVDSVSRRPTFNDNLKTLFEELLMEFNVKGADT 450
S S R F LK LFEELLMEF VKGA+
Sbjct: 459 -----------------------SCSAR--FKSALKRLFEELLMEFTVKGAEC 486
>Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 433
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 223/352 (63%), Gaps = 37/352 (10%)
Query: 118 PGVEATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHHYAATS- 176
PG +PW + TV+ NK K + FKQFDTV + SDH+Y+ +
Sbjct: 101 PGTSTVLPWGCTTPGRPRKHKEIKTVD----NKIDEKYKAFKQFDTVTDHSDHYYSMSGK 156
Query: 177 GDVTK-----RDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGL 231
G+V + +DWV+RIQH+WK+LEKDLP +I+VRV EDRM+LLRA I+GP GTPYHDGL
Sbjct: 157 GNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGL 216
Query: 232 FFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTM 291
FFFD+ F + YP PP V Y SGGLR+NPNLY++GKVCLSLL TW+G GCE WNPS STM
Sbjct: 217 FFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTM 276
Query: 292 LQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPE 351
LQVLVSIQAL+LN KPYFNEPGYA+ AN+ GE+++M YN++TFL SCRTMLYSLR PP+
Sbjct: 277 LQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPK 336
Query: 352 HFADLVTSHFRERGHTILAACRYYMEGHKVGSVVPEE-KEPEYGDXXXXXXXXXXXXXXX 410
HF D HF + G IL C+ YM G +VG + ++ + GD
Sbjct: 337 HFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNGVQDVDEGDK-------------- 382
Query: 411 XLKPRPDKVDSVSRRPTFNDNLKTLFEELLMEFNVKGADTAKFLAEKVKKSS 462
S F +LKTLF+EL+ EF G +F ++V S
Sbjct: 383 ------------SCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRVNPGS 422
>Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 374
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 148/227 (65%), Positives = 178/227 (78%)
Query: 157 LFKQFDTVKNFSDHHYAATSGDVTKRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLR 216
LF QFD V++FSDH+YA S T +DWVK IQ++WKLL+KDLP SIYVR EDR+DLLR
Sbjct: 87 LFNQFDVVQDFSDHYYAKNSPGKTSKDWVKTIQNEWKLLQKDLPESIYVRAYEDRIDLLR 146
Query: 217 AAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTW 276
AAI+GP GTPYHDGLFFFD++F + YP +PP V+YHSGGLR+NPNLY +GKVCLSLL TW
Sbjct: 147 AAIVGPAGTPYHDGLFFFDVRFPSEYPQSPPKVHYHSGGLRLNPNLYESGKVCLSLLNTW 206
Query: 277 AGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFL 336
G+GCE W S+ST+LQVLVSIQ L+LN+KPYFNEPG + AN+ GE+ ++ YN FL
Sbjct: 207 WGTGCEKWGKSKSTILQVLVSIQGLVLNDKPYFNEPGNKNSANTAPGEKYSLAYNQTAFL 266
Query: 337 HSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYMEGHKVGS 383
SCRTM+YSLR+PP+HF LV HF ER IL AC Y+ G VGS
Sbjct: 267 LSCRTMMYSLRKPPKHFESLVARHFHERERVILDACDAYISGAVVGS 313
>Os01g0125900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 1063
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 182/275 (66%), Gaps = 3/275 (1%)
Query: 112 DDLDLPPGVEATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHH 171
DD+D G ++T + S K +V+ + A+K + S FK FD + DHH
Sbjct: 736 DDIDKAEGENNVATSESTVVTTNDASGGK-SVDVDMADKPGD-SDGFKHFDVQQCPPDHH 793
Query: 172 YAATSGDVTK-RDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDG 230
Y T R WVK++Q +W +LEK+LP IYVRV EDRMDL+RA IIG GTPY DG
Sbjct: 794 YLENMAQGTGGRKWVKKVQQEWNILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDG 853
Query: 231 LFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQST 290
LFFFD +P PPS YYHSGGLR+NPNLY +GKVCLSLL TW G G E W+PS S+
Sbjct: 854 LFFFDFHLPPEFPQVPPSAYYHSGGLRVNPNLYVDGKVCLSLLNTWTGRGNEVWDPSSSS 913
Query: 291 MLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPP 350
+LQVLVS+Q L+LNEKPYFNE GY +V GE+ A+ YN+NT+L S ++MLY LRRPP
Sbjct: 914 ILQVLVSLQGLVLNEKPYFNEAGYEKQVGTVEGEKNALPYNENTYLLSLKSMLYILRRPP 973
Query: 351 EHFADLVTSHFRERGHTILAACRYYMEGHKVGSVV 385
HF D SHF +RG IL AC Y++G+ VG++
Sbjct: 974 MHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLT 1008
>Os01g0677500
Length = 389
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 152/200 (76%), Gaps = 7/200 (3%)
Query: 158 FKQFDTVKNFSDHHYAATSGDVTK------RDWVKRIQHDWKLLEKDLPASIYVRVAEDR 211
FKQFD V + SDH Y+ + +DWVKRIQH+WK+LEKDLP +I+VRV EDR
Sbjct: 183 FKQFDIVGDHSDHFYSNPRERKVQVVNEPGKDWVKRIQHEWKVLEKDLPDNIFVRVYEDR 242
Query: 212 MDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLS 271
++LLRA IIGP GTPYHDGLFFFD+ F YP NP V YHSGG+R+NPNLY GKVCLS
Sbjct: 243 LELLRAVIIGPSGTPYHDGLFFFDVYFPPQYPRNPLLVIYHSGGMRLNPNLYACGKVCLS 302
Query: 272 LLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYN 331
LL TW G GCE WNPS ST LQVLVSIQAL+LN KPYFNEPG+ SYAN+ E+ ++ YN
Sbjct: 303 LLNTWPGDGCEKWNPSNST-LQVLVSIQALVLNAKPYFNEPGFESYANTPRAEKKSIAYN 361
Query: 332 DNTFLHSCRTMLYSLRRPPE 351
TFL SC+TMLYSLR PP+
Sbjct: 362 QETFLLSCKTMLYSLRNPPK 381
>Os05g0153100
Length = 1045
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 155/235 (65%), Gaps = 3/235 (1%)
Query: 150 KSANKSQLFKQFDTVKNFSDHHY--AATSGDVTKRDWVKRIQHDWKLLEKD-LPASIYVR 206
K + S FD V+ DHH+ G WVKR+Q +W++L D LP +IYVR
Sbjct: 743 KVEDDSLGVAHFDVVQCPPDHHFLDCKLEGAAHGNKWVKRVQKEWQILGNDNLPGTIYVR 802
Query: 207 VAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNG 266
EDRMDLLRAA++G G+PYHDGLF FD+ +YPA PP VYYHS GLR+NPNLY +G
Sbjct: 803 AFEDRMDLLRAAMVGAAGSPYHDGLFLFDLHLPATYPAAPPEVYYHSFGLRVNPNLYPSG 862
Query: 267 KVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNEKPYFNEPGYASYANSVSGERI 326
VCLSLL T+ G G E W+P++ST+LQVLVSIQ L+L PY+NE GY +YA + G R
Sbjct: 863 TVCLSLLNTFDGEGVEVWSPARSTLLQVLVSIQGLVLTADPYYNEAGYDAYAGTPGGRRN 922
Query: 327 AMEYNDNTFLHSCRTMLYSLRRPPEHFADLVTSHFRERGHTILAACRYYMEGHKV 381
A Y +N L + R+ L+ LRRPP F +V +HFR RG +LAAC Y+ G +V
Sbjct: 923 AASYAENACLLTLRSALHLLRRPPRGFEGVVGAHFRRRGAHVLAACESYLRGTRV 977
>Os01g0229900 Similar to Shaggy-related protein kinase dzeta (EC 2.7.1.-)
(ASK-dzeta)
Length = 258
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 158 FKQFDTVKNFSDHHYAATSGDVTKRDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRA 217
F FD V++FSDH+YA S T +DWVK IQ++W+LL+KDLP SIYVRV EDR+DLLRA
Sbjct: 136 FSHFD-VQDFSDHYYAKNSPGKTSKDWVKTIQNEWRLLQKDLPESIYVRVYEDRIDLLRA 194
Query: 218 AIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSGGL 256
AI+GP TPYHDGLFFFD+ F + YP + + H L
Sbjct: 195 AIVGPAETPYHDGLFFFDVHFPSEYPQSHRLTHVHIPSL 233
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KR+ D+K L++D PA I ++ + L A I GP TP+ G F +QF+ YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP+V + S +PN+Y +G +CL +L W+P + +L SIQ+L+ +
Sbjct: 67 PPTVRFVSRMF--HPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
P N P + A S + EYN
Sbjct: 117 NP--NSPANSEAARLFSENK--REYN 138
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRIQ + L KD P S A + + +A I+GP +PY G+FF +I F YP
Sbjct: 4 KRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVNFQTK--VYHPNINSNGSICLDILK-------EQWSPAL-TISKVLLSISSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KR+ D+K L +D PA I ++ + L A I GP TP+ G F +QF+ YP
Sbjct: 7 KRLMRDFKRLMQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP+V + S +PN+Y +G +CL +L W+P + +L SIQ+L+ +
Sbjct: 67 PPTVRFVSRMF--HPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
P N P + A S + EYN
Sbjct: 117 NP--NSPANSEAARLFSENK--REYN 138
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KR+ D+K L++D PA I ++ + L A I GP TP+ G F +QF+ YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + S +PN+Y +G +CL +L W+P + +L SIQ+L+ +
Sbjct: 67 PPVVRFVSRMF--HPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 306 KPYFNEPGYASYANSVSGERIAMEYN 331
P N P + A S + EYN
Sbjct: 117 NP--NSPANSEAARLFSENK--REYN 138
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRI + K L+KD P S A + M +A I+GP +PY G+F +I F YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVSFKTK--VFHPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRIQ + K L+KD P S + M +A I+GP +PY G+F I F YP
Sbjct: 4 KRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L + W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVAFRTKVF--HPNINSNGSICLDILK-------DQWSPAL-TISKVLLSICSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 12/145 (8%)
Query: 185 VKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPA 244
++RI + K L++D P S D M +A I+GP +PY G+F I F YP
Sbjct: 3 LRRIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPF 62
Query: 245 NPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILN 304
PP V + + +PN+ +NG +CL +L + W+P+ T+ +VL+SI +L+ +
Sbjct: 63 KPPKVAFKTKVF--HPNINSNGNICLDILK-------DQWSPAL-TISKVLLSICSLLTD 112
Query: 305 EKPYFNEPGYASYANSVSGERIAME 329
P ++P A+ +R+ E
Sbjct: 113 PNP--DDPLVPEIAHMCKTDRLRYE 135
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 186 KRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPAN 245
KRI + K L+KD P S + M +A I+GP +P+ G+F +I F YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFK 63
Query: 246 PPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTMLQVLVSIQALILNE 305
PP V + + +PN+ +NG +CL +L E W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVSFRTKVF--HPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLTDP 113
Query: 306 KP 307
P
Sbjct: 114 NP 115
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,542,327
Number of extensions: 557315
Number of successful extensions: 1189
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 1176
Number of HSP's successfully gapped: 18
Length of query: 485
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 380
Effective length of database: 11,553,331
Effective search space: 4390265780
Effective search space used: 4390265780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)