Os01g0233900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0233900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.97 | 0.455 | 8.44 | 2.94 | 0.484 | 1.27 | -0.297 | -1.79 | 0.594 | 3.7 | 78.77 | 1256 | -- | -- |
| 97.76 | 0.461 | 8.41 | 3.09 | 0.486 | 1.11 | -0.497 | -- | 0.61 | 3.3 | 79.19 | 1295 | -- | -- |
| 93.96 | 0.451 | 8.44 | 2.94 | 0.472 | 1.31 | -- | -1.95 | 0.593 | 4.2 | 79.09 | 1207 | -- | -- |
| 98.44 | 0.462 | 8.41 | 3.1 | 0.487 | 1.12 | -- | -- | 0.622 | 3.86 | 79.48 | 1232 | -- | -- |
| 105.43 | 0.478 | 8.44 | 2.93 | -- | 1.45 | -- | -1.99 | 0.601 | -- | 80.32 | 1200 | -- | -- |
| 126.18 | 0.527 | 8.42 | 3.28 | 0.644 | -- | -0.345 | -- | 0.568 | 3.07 | -- | -- | -- | -- |
| 126.57 | 0.527 | 8.42 | 3.29 | 0.643 | -- | -- | -- | 0.57 | 3.11 | -- | -- | -- | -- |
| 110.19 | 0.489 | 8.42 | 3.15 | -- | 1.3 | -- | -- | 0.597 | -- | 85.66 | 1202 | -- | -- |
| 342.79 | 0.862 | 8.47 | -- | 0.514 | 1.66 | -- | -- | 0.401 | 3.18 | 75.92 | 1319 | -- | -- |
| 150.15 | 0.573 | 8.42 | 3.32 | -- | -- | -- | -- | 0.587 | -- | -- | -- | -- | -- |
| 412.21 | 0.95 | 8.5 | -- | 0.708 | -- | -- | -- | 0.204 | 3.12 | -- | -- | -- | -- |
| 353.07 | 0.875 | 8.47 | -- | -- | 1.86 | -- | -- | 0.354 | -- | 76.72 | 1204 | -- | -- |
| 440.8 | 0.98 | 8.5 | -- | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.12 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 2 | 91.16 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 3 | 91.25 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 14 | 92.30 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 37 | 93.40 | humidity | 80 | 1440 | < th | dose dependent | sin | 5 | NA |
| 45 | 93.73 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 6 |
| 46 | 93.79 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 112 | 94.90 | humidity | 70 | 720 | > th | dose independent | sin | 10 | NA |
| 124 | 95.07 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 140 | 95.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 175 | 95.44 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 20 |
| 178 | 95.47 | humidity | 80 | 1440 | > th | dose independent | sin | 4 | NA |
| 190 | 95.51 | humidity | 80 | 720 | < th | dose dependent | sin | 10 | NA |
| 239 | 95.81 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 20 |
| 289 | 95.97 | humidity | 50 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 302 | 96.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 305 | 96.03 | humidity | 60 | 1440 | < th | dose dependent | rect. | 15 | 20 |
| 318 | 96.11 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 11 |
| 335 | 96.17 | humidity | 70 | 720 | < th | dose independent | sin | 10 | NA |
| 364 | 96.28 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 409 | 96.42 | humidity | 60 | 1440 | < th | dose dependent | rect. | 13 | 22 |
| 416 | 96.46 | humidity | 60 | 1440 | < th | dose dependent | sin | 16 | NA |
| 464 | 96.57 | humidity | 60 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 489 | 96.63 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 502 | 96.68 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 13 |
| 534 | 96.74 | humidity | 60 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 539 | 96.76 | humidity | 60 | 1440 | < th | dose dependent | sin | 11 | NA |
| 543 | 96.78 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 14 |
| 602 | 96.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 623 | 96.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 678 | 97.05 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 686 | 97.08 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 15 |
| 699 | 97.11 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 714 | 97.12 | humidity | 60 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 740 | 97.16 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 751 | 97.22 | humidity | 80 | 720 | > th | dose independent | rect. | 6 | 16 |
| 762 | 97.24 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 769 | 97.27 | humidity | 60 | 1440 | < th | dose dependent | no | NA | NA |